KEGG   Capsella rubella (pink shepherd's-purse): 17900225
Entry
17900225          CDS       T02984                                 
Name
(RefSeq) RNA-binding protein Y14
  KO
K12876  RNA-binding protein 8A
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03013  Nucleocytoplasmic transport
crb03015  mRNA surveillance pathway
crb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    17900225
  09122 Translation
   03013 Nucleocytoplasmic transport
    17900225
   03015 mRNA surveillance pathway
    17900225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crb03019]
    17900225
   03041 Spliceosome [BR:crb03041]
    17900225
Messenger RNA biogenesis [BR:crb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     17900225
Spliceosome [BR:crb03041]
 Complex C
  Other components
   EJC/TREX
    17900225
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_3
Other DBs
NCBI-GeneID: 17900225
NCBI-ProteinID: XP_006305632
UniProt: R0IJ97
LinkDB
Position
Unknown
AA seq 202 aa
MANIESEAVDFEPEEDDLMDEEGTAVDPADVSPRAGQPRLKSAIAGANGESAPQRKTKGR
GFREERDSDRQRHLSSRDFESLGSDGGSGPQRSIEGWIILVSGVHEEAQDDDLFNAFGDF
GEIKNLHLNLDRRTGFVKGYALIEYEKKEEAQKAISAMNGAELLTQNVSVDWAFSNGPIA
GGSQWRKNQRSGRRSRSPRRRY
NT seq 609 nt   +upstreamnt  +downstreamnt
atggcgaacatagagtcagaagcagtcgatttcgagccagaggaggatgaccttatggat
gaagaaggtacagcagttgaccccgccgatgtttctccacgcgccggacaacctaggctt
aagtcggctattgccggagcaaatggcgaatcagctccgcagaggaagaccaaaggccgt
gggtttcgcgaggagagagattccgatcgtcagcgccatctttcatcgcgcgatttcgaa
tcactcggttctgacggcggttctggtccacagagatccattgaaggatggattattttg
gtctctggagttcatgaggaggcacaggatgatgatttattcaatgcttttggtgatttt
ggggagataaagaatctacatctcaatctcgatcgtcgtactggttttgtcaagggctat
gctttgatagaatatgagaagaaagaagaagcacagaaggctatttcagcaatgaatggg
gcggagcttctaacgcagaatgtcagtgttgactgggcattcagcaatggtcccattgct
ggtggatctcagtggagaaagaaccagaggtctggaaggcgttcacgaagcccgagaaga
cgttactga

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