Capsella rubella (pink shepherd's-purse): 17900280
Help
Entry
17900280 CDS
T02984
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
17900280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17900280
03036 Chromosome and associated proteins [BR:
crb03036
]
17900280
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
17900280
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
17900280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
PilN
Motif
Other DBs
NCBI-GeneID:
17900280
NCBI-ProteinID:
XP_023644701
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MFGSSNPFGQSSGSSPFASQSLFGQTSNSSSNNPFAPATQFGTSTPFAAQTGSSIFGSTS
TGVFGAPQASSPFASTPTFGASSSPAFGNSTPAFGASPASSPFGGSSGFGQKPLGFSTPQ
SNPFGSTVQQSQSAFGNSTFGSSTPFGATNTPAFGASSTPSFGATSTPSFGASSTPAFGA
TNTPAFGASNSSSFGVTNTPAFGASPTPAFGSTGTTFGNTGFGSGGAFGASSTPAFGASS
TPAFGASGTPAFGASSTPAFGTSSTPAFGASSTPAFGASSTPSFGASNTSSFSFGSSPAF
GQSTSAFGSSAFGSTPSPFGGQGAQASTPTFGGSGFGQSPFGGQQGGSRAVPYSPTVEAE
TGSGTQPAGKLESISAMPAYKDKNHEELRWEDYQRGDKGGPLPAGQSPGNAGFGISTAQA
NPFSPSPAFGQTSANPTNPFSSSTSTNPFAPQTPTIASSGFGTATSNFGSSPFGVTSSSN
LFGSTSSTTTSVFGSSSAFGTTTSSPLFGSSSNPGFGSSSSIFGSAPGQGATPAFGNSQP
STLFNSTPSAGQTGSAFGQTGSAFGQFGQSSAPAFGQNSIFNKPSTGFGNMFSSSSTLTT
SSSSPFGQTMTAGMTPFQSAQPGQASNGFGFNNFGQTQAANTAGNAGGLGFFGQGNFGQS
PAPLNSVVLQPVAVTNPFGTLPAMPQISINQGGNSPSIQYGISSMPVVDKPAPVRISSLL
TSRHLLHRRVRLPARKYRPGENGPKVPFFTDDEESSSTPKADALFIPRENPRALVIRPAQ
QWSSRDKSTLPKASPSAPVHENVSGKGRDMGTDATNHDKNGNGELGATGERNHPSVSANQ
KPNGPTCSDQTSEKDRPYKTLNGHRAGEVAIVYEHGAEIEALMPKLRQSDYFTEPRIQEL
AAKERADPGYCRRVRDFVVGRHGFGSIKFMGETDVRRLDLESLVQFNNREVIVYMDESKK
PAVGQGLNKPAEVTLLNIKCVDKKTGKQFTEGERVERYKTMLKKKAEAQGAEFVSFDPVK
GEWKFRVEHFSSYKLCDEDDDEV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctcatccaatccttttggacagtcatctggtagcagcccatttgcgtcccaa
tctttatttggtcagaccagcaattccagtagtaataatccctttgctccagcaacacag
tttggtacatctactccttttgctgcacagacgggaagttcaatatttggaagcacttca
accggtgtttttggtgcaccccaagcatcctctcccttcgcctccaccccaacttttgga
gcttcttcgtcaccagcatttgggaattctactccggcctttggagcatctccagcatct
tcaccttttggtgggtcttctggtttcgggcagaaacctttgggattttcaacgcctcag
tcaaatccttttggaagcacagtgcaacaatcccaatctgcatttggaaacagtactttt
ggttcatctacaccttttggtgccacaaacacacctgcgtttggcgcatcaagtacacct
tcctttggcgccacaagcacaccctcgtttggtgcatcaagcacgcctgccttcggtgcc
acaaacacgcctgcctttggcgcctcaaactcttcctcctttggcgtcacaaacacacct
gcgtttggtgcgtcaccgactccagcttttggtagcactggcaccacgtttggcaacact
ggctttggttctggaggtgcttttggagcttcaagcacccctgcttttggagcttcaagc
acccctgcttttggtgcatcaggcacccctgcttttggtgcatcaagtacacctgccttt
gggacatccagtacacctgcctttggggcatccagtactcctgcctttggggcatccagt
acaccttcttttggtgcatcaaatacctcatcctttagttttggctcttccccagctttt
ggccagtctacatcagcatttggtagcagcgcttttggctctacaccatctccctttgga
ggtcaaggtgcgcaggcttcaactccaacatttgggggttctggttttggtcaatcacct
tttggtggtcaacaagggggtagtcgagccgtgccttattcaccgacggttgaggcagag
acagggagcggtacacagcctgctggaaagttggaatctatttctgccatgccagcatac
aaagataaaaaccatgaggagcttaggtgggaggattaccaacgaggagataaaggtgga
ccactacctgctggccagtctcctggaaatgccggatttggtatatcaactgctcaggca
aatcctttttccccatcaccggcgtttggtcagacatcagcaaatccaacaaaccctttt
tcgagctcaacatctacaaacccttttgcccctcaaaccccaacaattgctagttcgggt
tttggaacagctacgtcaaattttggttcctcaccctttggtgtaacctcttcctccaat
ctttttggatcaacttcatcaaccaccacatccgtttttggatcatcctccgcttttgga
acaacaacatcatcacctttatttggttcatcaagcaatcctggatttggctcttcttca
tcaatctttggttcagctcctggtcagggggcaactccggcatttggcaacagtcagcca
tctactctattcaattcaaccccctcggctgggcagactggttctgcatttggacagact
ggttcggcttttggacaattcggacagagtagtgctcctgcatttggccaaaatagcatt
ttcaataaaccttccactggatttggtaacatgttttcaagttcttctacactaactacg
tctagcagctctccatttggacaaacaatgactgctggtatgacaccctttcaatcagct
cagccaggtcaagcatcaaatggttttggtttcaacaacttcggtcaaacgcaagcagct
aatacagctggaaatgctggtggactgggattttttggtcaaggcaacttcgggcaatcg
cctgctccgctgaactctgttgttttgcaaccagttgctgttacaaacccatttggaaca
cttcccgctatgcctcagatttcaataaatcaaggtggaaattcaccttccattcaatat
ggaatctccagcatgcctgttgttgacaaacctgctcctgtgagaatatcatctctcctg
acttctcgacaccttttacacaggcgggtcagattgccagcaagaaagtaccgtcctggc
gagaatggtccaaaggttccatttttcactgatgacgaggaaagctcaagtacaccaaag
gcggatgctcttttcattccaagggagaaccctagagccctagttatacgcccagctcaa
cagtggtcttcgagggacaaatcaacacttccaaaggccagcccgagtgctccagtacat
gaaaatgtttcagggaagggtcgagacatgggcactgatgcaacaaaccatgacaaaaat
ggtaatggagaacttggtgcaactggagaaagaaatcatccatcagtcagtgctaatcag
aaacctaatggcccaacatgctcagatcagactagcgagaaagaccgtccctacaaaaca
ctaaatggacacagagcaggagaagttgcgatcgtttatgaacacggtgcggaaatcgag
gctctaatgccgaagctacgccaatctgattatttcaccgagccccgaatccaggaacta
gcagctaaggaaagagcggatccgggttattgcaggcgggttagagactttgtggttgga
cgtcacggttttggtagcataaagttcatgggagagacagatgtgcgtaggctagacttg
gaatcgctggttcagttcaataacagggaagtgattgtatacatggatgagagcaagaaa
ccggcagttgggcaaggtttgaataaaccggcggaggtaaccttgctgaacataaaatgt
gttgataagaagacaggaaaacagtttactgaaggagagagggttgagaggtataagacg
atgcttaagaagaaagctgaggcacaaggagctgagtttgtgtcatttgatcctgtgaaa
ggcgagtggaagtttagggtggagcattttagttcctataagctctgcgatgaagatgat
gatgaagtttag
DBGET
integrated database retrieval system
