Capsella rubella (pink shepherd's-purse): 17900312
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Entry
17900312 CDS
T02984
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 7
KO
K05391
cyclic nucleotide gated channel, plant
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
17900312
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crb04040
]
17900312
Ion channels [BR:
crb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
17900312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
17900312
NCBI-ProteinID:
XP_006306900
UniProt:
R0IR94
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MYKSQYISGQREKFVRLDDIDSTSSPATGMMMKTNCLGFNLKNRGGEKKKVSKSFREGVK
KIGSEGLITIGKSVTRAVFPEDLRITEKKIFDPQDKTLLIWNRLFVISCILAVSVDPLFF
YLPVVDNSGSSCIGIDTKLAVATTTLRTIVDVFYLTRMALQFRTAYIAPSSRVFGRGELV
IDPAKIAERYLTRYFIVDFLAVFPLPQIAVWKFLHGSKGSDVLPTKTALLNIVIVQYIPR
FVRFIPLTSELKKTAGAFAEGAWAGAAYYLLWYMLASHITGAFWYMLSVERNDTCWRFAC
KVQPDPRLCVQILYCGSKFVSSRENEWIKTVPELLKSNCSAKQDDSKFNYGIYGQAISSG
IVSSTSFFSKFCYCLWWGLQNLSTLGQGLQTSTFPGEVLFSIAIAIAGLLLFALLIGNMQ
TYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSL
PKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPTLYTESTYIVREGDPVNEMM
FIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTE
VEAFALEAEELKFVASQFRRLHSRQVQQTFRFYSQQWRTWASCFIQAAWRRYSRRKIAEL
RRIEEEGEEMGYEDDYDEESDKRPMVITRTESSSRLRSTILASRFAANALKGHRLRSSES
STNLLSLQKPPEPDFGAE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaatcacaatacataagcggccagagagaaaaattcgttaggttagatgatata
gattcaacttcttctcctgcgactggaatgatgatgaagacgaattgtttaggatttaac
ctaaagaatcgaggaggagaaaagaagaaagtatccaaatctttcagggaaggagtcaaa
aaaatcggatcggaaggtctaataaccatcggtaaatccgtaacgagagcggtttttcca
gaagatttgaggataacagagaagaaaatattcgacccacaagacaagacacttctcata
tggaacagattgttcgtcatttcttgtattctagctgtctcggttgacccattgttcttc
tatcttcccgttgtcgataattccggaagcagctgtatagggattgacacgaaactagct
gttgcaaccacgactcttagaaccatcgttgacgttttctacttgactcgaatggctctt
cagtttcgtacagcttatatagctccttcttctcgtgtctttggtcgtggtgagcttgtg
attgatcctgcaaagatcgctgaacgctacttaacccgttatttcatcgttgatttcctt
gctgtgtttcctttacctcagattgcggtgtggaagtttcttcacgggtcgaagggatca
gatgtgttacccacgaaaacagcactattgaacattgtgatcgtgcaatatattccgaga
ttcgttaggtttataccgttaacatcagaactgaagaaaactgcaggagcttttgctgaa
ggagcttgggctggtgctgcttattatctcctctggtatatgcttgcaagccacattact
ggagcgttttggtacatgttgtcagtggaacgtaacgatacttgttggagatttgcttgt
aaagtccagccagatccgcgactctgtgttcaaattctgtattgtgggagtaaatttgtg
agcagtcgtgaaaatgaatggatcaaaactgtccctgagcttctcaaaagcaattgttct
gctaaacaagatgattcaaagtttaactatgggatatacggtcaagctatatcttcaggc
attgtatcatcaacatcgtttttctccaagttctgttattgtctttggtggggtcttcaa
aatctcagcacgttaggtcaagggctgcaaactagtacatttcccggagaggttttgttt
tctattgcgattgcaatagctgggcttcttcttttcgcgcttctaatcgggaatatgcag
acttatcttcagtcacttactgttcgtctcgaggaaatgaggatcaaaagacgtgactcc
gaacagtggatgcatcacaggtcacttccacaaaatctgagggaaagagtcagacgctat
gatcaatacaaatggttagagacaagaggtgtcgacgaagaaaacatagtccagagttta
cccaaggatctcaggagagacatcaaacgccatctctgtctgaatttagttagaagggtt
cctctgtttgctaatatggatgaaagattacttgacgcgatctgtgagagattaaagccg
actttatacacagaaagcacatacattgtgcgtgaaggagacccggttaacgaaatgatg
ttcataatccgaggtcggttagagagtgtaacaacagatggaggaagaagtggtttcttc
aatagagggttattgaaagaaggagacttttgtggtgaagagctgctgacatgggcactt
gaccctaaagcaggctccaacttaccttcttccacaagaactgtgaaggctctgactgaa
gtagaggctttcgctcttgaagctgaagagctgaagtttgtagctagtcagtttaggaga
ctccatagtcgacaggttcaacaaacgtttaggttttattcgcagcaatggagaacttgg
gcttcttgcttcatccaagctgcttggcgtcgttattctagaaggaaaatcgctgaattg
agacgcattgaagaagaaggagaagaaatgggttatgaagatgactatgatgaagaaagc
gacaaaaggcctatggtcatcactagaactgagtcttcttctaggctacgttcaactatc
ttggcatcaagatttgctgctaatgcattgaaagggcacagactaaggagctcagagagt
tcaacgaacttgctgagtctacaaaagcctccggaacctgattttggtgccgagtaa
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