Capsella rubella (pink shepherd's-purse): 17900381
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Entry
17900381 CDS
T02984
Name
(RefSeq) SWI/SNF complex subunit SWI3C isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
17900381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17900381
03036 Chromosome and associated proteins [BR:
crb03036
]
17900381
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
17900381
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
17900381
PBAF complex
17900381
GBAF(ncBAF) complex
17900381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
DUF7685
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
17900381
NCBI-ProteinID:
XP_023645193
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MPASEDRRGKWKRRKRGGLSAARKPKQEEEDIEEEDEENNNHNNEEMDDVDNADELQQNG
GVTPDPGHRIGEVVEDSGSRISDFPSVVKRVVIRPHASVTAVVAAERAGLIGETRGQGLL
PALENISFGQLQALSTVPADALSLDLERSDGTTSAYVISPPPIMEGEGVVKRFGDLVHVL
PMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLTISDC
QGLVDGVDVEDFARVFRFLDHWGIINYCATAQSHPGPSRDVLDVREDTNGEVHVPSAALT
SIDSLIKFDKPNCRHKGVEVYSSLSSLDGDIPDLDIRIREHLCDNHCNHCSQPLPTVYFQ
SQKKGDILLCSDCFHHGRFVVGHSCLDFVRVDPSKFYGDQDGDNWTDQETLLLLEAVELY
NENWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEVPGVTNSENPTNGYDHKGTDSNG
DLPVYSEQDSDTEIKLPFVKSPNPVMALVAFLASAVGPRVAASCAHESLAVLSEDDRMKS
EEVRGKEAGENQQQDENSGALKTSSQNGAEPTTPLPQDKVMVAFRAGLSAAATKAKLFAD
HEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFAGERARMLSAR
FGSPGGISPQTNNSSLQGMSLSTGSNNINTLLQQQQQQISATSQPSIIPGFSNNPQVHAQ
MQFMARQQQQQQQHQQQQAFSFGPRLPLNAIQTNAGSTASPNVMFGNNQLNNPGGGAASS
SINQPSFSHPMVRSSTGSGSGSGLGLN
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttctgaagatagaagagggaaatggaaacgacggaagcgaggggggttatcg
gcggcgaggaaaccgaaacaagaggaggaagatattgaggaagaagacgaagagaacaac
aaccacaacaacgaagaaatggatgatgttgataatgccgatgagcttcagcagaacggc
ggcgtaactcccgatccgggacaccgtattggcgaggtagttgaagattccggttcgcga
atctctgatttcccctctgtggttaagcgggttgtgatccggccacacgcgtctgtaacg
gctgttgtggctgctgagagagctggtttgattggggagactagagggcaaggtttgctt
cccgctttggagaatatttcgtttgggcaattgcaagcgctgtctactgtaccggctgat
gctttgtcccttgatcttgagaggagtgatggaacgacttcggcttatgttatctcccca
ccacctatcatggaaggagaaggagttgttaaacggtttggggatctggttcatgtcttg
cctatgcattcagattggtttgcaccaaacacagtggatcggcttgagaggcaagtggtg
ccacaattcttctctggaaaatcgccaaatcatacacccgaaagttatatggaattcagg
aacgccattgtttcaaaatatgtggagaaccctgaaaagacactgacgatttctgattgc
caaggattggtagatggtgttgacgttgaagattttgcacgagtattccgttttcttgat
cactggggaataatcaattactgtgccactgcccagtcacatcccggaccctctagagat
gtattggatgttagggaggatacaaatggtgaggtccacgtgccatctgctgctttaact
tctattgatagtttgatcaaatttgacaagcccaactgtagacacaagggggttgaagtc
tattcatccttgtcaagcttggatggtgatatccctgacttggacatcagaattcgtgaa
cacctttgtgataatcattgcaaccattgttctcaaccgcttccaactgtgtatttccag
tcgcaaaagaagggggatatactcttatgctctgattgttttcaccatggaagatttgtt
gttggacattcttgtcttgactttgtaagagtggatccatccaaattttatggcgatcaa
gatggagacaattggactgatcaggaaactctcttgcttcttgaagctgtggaactctac
aatgaaaattgggttcaaattgcagatcatgttggttccaaatcaaaggctcaatgcatt
cttcattttcttcgattacctgtggaggatggtcttttggataatgttgaggttccaggc
gtaactaattcggaaaaccctacaaatggatatgaccacaaaggaacagattcaaatggg
gatttacctgtatattcggagcaagattctgacactgagatcaagcttccctttgtgaag
tctccgaatcctgttatggcattggttgcatttttggcatcagctgttggacctcgagtt
gctgcatcctgtgcccatgagtcccttgcggttttatctgaggatgataggatgaaatcc
gaggaagtgcgagggaaagaagctggagaaaatcagcagcaagatgaaaactcaggagca
cttaaaacatcgagccaaaatggagcagagccaacgactccactgccacaggataaggtt
atggtagcatttagagccggtctatcagctgcagcaacgaaagcaaaattgtttgccgat
catgaagaacgtgagatccaaagactttctgcaaatattgtaaatcaccagctgaagagg
atggagctgaagctaaagcagtttgcagaaattgagacattgttgatgaaagaatgtgaa
caagtagagaaaacccgtcagagatttgctggagaacgagcccgtatgctctcagcaaga
tttggatcacctggaggaatctctccacagactaataatagtagtctccaagggatgtct
ctatccacaggtagtaacaacatcaatactctactgcagcagcagcaacaacaaatttca
gcaacttctcaaccaagcatcatcccgggattcagcaacaacccgcaagtccatgcgcag
atgcagttcatggcacgacaacaacaacaacaacagcaacatcaacagcaacaagccttc
tcgtttggcccaagattacctctcaatgcaatacaaacgaacgcaggatcaacggcttca
ccaaatgtgatgtttggcaacaaccaacttaataacccaggaggtggagcagcatcatca
tccatcaaccaaccctcgtttagtcacccgatggttaggtcttccacgggttcaggctca
gggtccggtttaggcttaaactga
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integrated database retrieval system
