Capsella rubella (pink shepherd's-purse): 17900396
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Entry
17900396 CDS
T02984
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
17900396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17900396
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
17900396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
17900396
NCBI-ProteinID:
XP_006306449
UniProt:
R0GTS3
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
MSQDEEIVLRDVTNAGICIGDRIGREAASQLDLEEALEASRYASHPYSTHPREWPPLIEV
GETWELPSVLIERYNTAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKRDGQCPEYSGA
EQAICAVGLAKCRPGVFVEAIQYLLVLATPVELVLVGVCCTEGPDGRDPYAEISVQPLPD
YTISSDGVTMTCVTCTNKGRIFIAGRDGHIYELLYTTGSGWNKRCRKVCLTAGVGSMISR
WVVPNVFKFGAVDPVIEMVVDNERQILYARTEEMKLQAYVFGPNGEGPLKKVAEERNLLN
QKDASQGNRQSAVAGRSNKPSIVSISPLSMLESKWLHLVASLSDGRRMYLSTSSSGSNIS
FSGFNNHRQTPNCLKVVSTRPSPPLGVGVGLGFGAASIAGRAQNEDLSMKVETAYYSVGT
LVLSDSSPPAMSSLLVVSRDSSVHSQVGSSSGPSSRSSRALREIVSSLPIEGRMLFVVDV
LPSPDTAATVQSLYSELEYCGLEVSGESYEKACGKLWARGDLSTQHILPRRKIVVFTTMG
MMELVFNRPVDILRRLLESNSPRSLLEDFFTRFGAGEAAAMCLMLAARIINFEDLVSNIV
ADKAAEAFEDPRIVGMPQFDGSSGLSNTRAATGGFSMGQVVQEAEPIFSGAHEGLCLCTS
RLLVPLWELSVMSKKISSDTMSEEGVLICRLSSSAMHVLESKIRSLEKFIRSRRNQRRGL
YGCVVGLGDVTGSILYGTGSELGATERNMVRNLFGAYSNGSESANKRQRLPCSPAELAAR
EVRAMECIRQLLLRSAEALFLLQLLSQHHIARLVQGFDTNLKQALVQLTFHQLVCSEEGD
QIATRLISAVMEYYTGSDGRGTVDDISGRLREGCPSYFKESDYKFFLAVERLERAALTSD
AEEKENVAREAFSFLSKIPGSADLRTVCKRFEELRFYEAVVCLPLQKAQALDPAGDAFND
QLDPSIREHALAQRKQCYEIIANSLRSLASSMLDEASRRQYICQIVHLGVQSTDRVFREY
LYKAMIELGLENELLEYGGPDLVPFLQNAGSHSASQVGAVCTGSSPLGHSGTPISSNQAK
YFDLLAKYYVSKRQHVLAAHVLLRLAERRAISSGDNPTLDQRKDYLSQAVLQAKNASNSD
GFVGSAQGASDSGLLDLLEGKLAVLQFQIKIRNELAAIASNIESSVAMQDSDQNGTVLDG
DSSDNSSIANAANENAMELSSELKSVTQLYNEYAVPFELWETCLEMLYFANYSGDADSNI
IRETWARLVDQALSQGGIAEACAVLKRVGSHVYPGDGVVLPLDVLCLHLEKAALERSEMN
ERVEDEEIARALLAACKGAAEPVLNAYDRLLSNAAIVSSPNLRIRLLSSVRVVLLEWAMS
VLSDRMGSSPASSSLMLGGSFALESRAVSNQGVRDKIANAANRYMTEVRRLALPPNKTEK
VYAGFKELDESLLSPFSF
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagacgaggagattgtgttgcgtgatgtgacgaacgctgggatttgcattggt
gaccgcattggccgagaagccgcatcgcagctcgatctagaagaagctcttgaagcttct
agatacgctagtcacccttattcgactcatcccagagagtggccgcctttgattgaggtt
ggtgagacttgggaattgccttctgttcttattgagaggtataatacagccggcggcgaa
gggacggctttgtgtgggatttttccggagattagacgagcttgggcatctgtagacaat
tctttgtttctgtggcgttttgacaaaagggatggacaatgtcctgagtatagtggggcg
gagcaggctatttgtgcggttggtctagcgaaatgtagacctggagtttttgttgaagct
attcaataccttttggtgctggcaactcctgttgagttggttcttgttggagtgtgctgc
actgaaggacctgatggtagagatccttatgctgaaatttcagtacagcctctacctgac
tatacaatttcatcggatggagtgacaatgacatgcgttacatgtaccaataaagggcgc
atattcattgctggacgtgatggtcacatatatgagctgctatatacaactggctcaggc
tggaataaacgttgtcgtaaagtgtgccttacggcaggcgtaggtagtatgatctcacgg
tgggttgtgccaaatgtattcaagtttggagctgtagatcctgtcatagagatggttgtg
gataacgaaaggcaaattttatatgcccgcactgaagagatgaaacttcaagcatatgtt
tttgggccgaatggggaaggtcctcttaagaaggttgcagaggaaaggaacctactaaat
cagaaggatgcgagccaaggaaatcggcagtcagcagtggccggtcgatctaacaagcca
tccatagtcagcatttcaccattgtctatgctggaatcgaaatggttgcaccttgttgca
tcattatcagatggcaggaggatgtatctttccacctcctcaagtggaagtaatattagc
ttcagtgggttcaacaaccaccgtcagactccaaactgtctgaaagtggtttcaaccagg
ccatctcctccattgggggttggtgttggtcttggttttggagccgcatctatagctggt
agagctcagaatgaagacctctctatgaaagttgaaacagcctactattctgttggaact
cttgtcctttcagattcatcgccacctgctatgtcttctcttcttgttgttagcagagat
tcaagcgttcactctcaggttggcagcagttcagggccaagttcaaggagttctcgggct
ttacgagaaattgtgtcttcccttcctattgaaggccgtatgctttttgtagtagatgtg
ctcccctctcctgatactgctgctactgttcaatctctatattcggaactagaatactgt
ggactcgaagtctcaggagagtcttacgaaaaggcttgtggaaaactctgggccagaggt
gatctttcaacccagcatattttgccaaggagaaagattgtcgtttttaccaccatgggt
atgatggaactggtttttaatagacctgttgatatcttaagaagacttctggaatccaac
tctccaaggtcccttctagaagattttttcacccgctttggagcaggtgaagcagctgcc
atgtgcttgatgttggctgcccggataataaattttgaagatttagttagtaacattgtt
gccgataaagcagctgaggcttttgaggatccgagaattgtaggaatgccacaatttgat
ggcagtagtggattgtcaaacactagagcagcaactggaggtttcagcatgggccaagtt
gttcaagaagccgagcccattttctcaggtgctcacgaagggctctgcctttgtacatca
agattactcgttccactatgggaactttctgtgatgtctaaaaaaatcagttctgacacc
atgtctgaggaaggagtgctgatctgtcgtctttctagcagtgctatgcatgttctggaa
agcaagattcgctcgttggagaaattcataagatctagaaggaaccagagaagggggctt
tatggatgtgttgttgggttaggagatgtaactggttctattttgtacggtactggttca
gagttgggagctactgagaggaatatggttaggaacttgtttggagcatattctaacggt
agtgagtcagcaaataaaagacaacgtctgccgtgtagtcctgctgaattggctgccaga
gaggtgagagctatggagtgtattaggcagttgcttctcagatctgcagaagcccttttc
ctactccaacttctatctcaacatcatattgctagactagttcaggggtttgacacaaat
ttaaagcaagctttagttcagttgacattccatcagctagtttgttctgaagagggtgac
caaattgcaacgaggctcatatctgccgtgatggagtattatactggctcagatggcagg
ggaacagttgatgatattagcgggcgactacgtgaaggttgcccaagttacttcaaggag
tctgattacaaattctttttagctgttgaacgtcttgagagagctgctttaacttctgat
gctgaagagaaggagaatgttgctagagaggcattcagtttcttgagtaagatccctgga
tctgcagatctccgaactgtctgcaaacgttttgaggaattgaggttctatgaagctgtt
gtctgcttgcctttgcagaaggcccaagctcttgatcctgctggcgatgctttcaatgac
caacttgatccttccataagagagcatgctcttgcccagcggaaacaatgctatgagatt
attgccaactccttgcgatctctagctagttccatgctagacgaggcttcacgtagacaa
tatatatgccagattgttcatcttggtgtgcaatcaactgatagagtgttccgggagtac
ctatacaaggccatgatagaactgggtcttgaaaacgagctccttgagtatggtggtccg
gatttggtaccttttctccagaatgctggcagtcattctgcatcacaggttggggctgta
tgtactggttcatctccgctgggtcactcaggaacaccgatttcatcaaatcaggcaaaa
tactttgatcttcttgcgaaatactatgtatcaaagagacagcatgtgcttgcggctcac
gtgcttctaaggcttgcagagagacgtgctattagttcaggggacaatcctacccttgac
caaaggaaagattacctaagtcaggcagttttacaagccaagaatgcaagtaatagcgat
ggtttcgtaggttctgctcaaggtgcttctgacagtgggttgcttgatctgcttgaagga
aaactcgcagttcttcagttccaaattaagatcagaaacgaacttgcagctatagcttcc
aatatcgagtcctcggttgccatgcaggactctgaccagaacgggacagtacttgatggt
gattctagtgataattccagcatagcaaatgcagcaaatgaaaatgccatggagctctcc
tcagaacttaaaagcgtaacacagttgtataatgaatatgctgtcccatttgagctctgg
gagacctgtctggagatgctctactttgccaactattccggtgatgctgattcaaatata
ataagggaaacatgggctagactcgttgaccaagctctttcacaaggtggaatagctgaa
gcctgtgcagttctcaagagagtcggatctcacgtataccctggcgatggagtagtttta
ccgcttgatgttttgtgccttcacctcgagaaagctgcacttgagagatcagagatgaat
gaacgtgttgaggatgaagaaatagctcgagctcttctggccgcttgcaaaggcgcagct
gaacctgtgcttaacgcttatgaccgtttattatccaatgcagccattgtatcatcccca
aatctaagaatccgactccttagttcggtacgagtggtgctccttgaatgggcaatgtct
gtattgtcagacagaatgggctcgagtccagccagctcttctctgatgctaggcggctcg
tttgctctagagagcagagctgttagtaatcaaggggtccgtgataagatcgcaaacgct
gcaaacaggtatatgacagaggtaaggagactggctctgccaccgaacaagacggagaaa
gtatacgcaggtttcaaagaacttgacgagtctctcttaagtccattctccttctga
DBGET
integrated database retrieval system
