Capsella rubella (pink shepherd's-purse): 17900449
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Entry
17900449 CDS
T02984
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17900449
Spliceosome [BR:
crb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
17900449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RL
TGF_beta
RRM_10
Phage_tail_terminator_5
DUF1797
Motif
Other DBs
NCBI-GeneID:
17900449
NCBI-ProteinID:
XP_023633271
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MAESSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF
FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQV
FSPYGFVEKLVTFQKSAGFQALIQYQVQQYAASARTALQGRNIYDGCCQLDIQFSNLEEL
QVNYNNDRSRDYTNPNLPAEQKGRSSHPGGGYGDVGVAYPQMANTAAIAAAFGGGLPPGI
TGTNDRCTLLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELA
VHFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAAKNYRYCCSPTKMIH
LSTLPQDVTEEEVVNHVQEHGAIVNTKVFEMNGKKQALVQFENEEEAAETLVCKHATSLG
GSIIRISFSQLQTI
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatcttccaaagtcattcatgttcgtaatgttggtcatgagatttctgaaaat
gatttgcttcagctttttcaaccatttggggttataactaagcttgtgatgctcagggca
aagaatcaggctcttctccaaatgcaagatgtttcttcagcagttagtgcccttcagttt
tttactaatgttcagccaactataagaggtaggaatgtgtatgtccagttctcctctcac
caagaattgacaactatagagcagaatattcatggacgggaagatgagccgaatcgtatt
ctcttagtcacaatccatcacatgctgtatccaattactgttgacgtgctgcatcaagtt
ttttctccctatggatttgtcgagaagctggtcactttccagaagtctgctggctttcaa
gctcttatacagtatcaagtacaacagtatgctgcctctgctagaactgccctacagggt
cgtaacatatatgatgggtgttgtcagctggatatccagttctcaaatcttgaggagctg
caagtaaattacaataatgatcgatctagggattatacaaacccaaacctgccagcagag
caaaaaggccgatcatcacatcctggtggcggctatggtgatgtaggagtggcatatcct
cagatggcaaacacagctgcaattgcagctgcctttggaggaggcttgcctccgggtata
actggcacaaatgataggtgtactctgcttgtctccaatctgaatgcagatagtattgat
gaggataagttattcaatctgttttctctttacggaaacattgtaaggattaagcttctt
agaaacaaacctgaccatgcccttgtccaaatgggtgatggtttccaggctgagcttgca
gtacatttcctcaagggagcgatgctgtttggtaagcggttagaagtaaacttctcgaag
catcctaatataacaccaggcacagactcccatgattatgtaaactcgaacctgaaccgc
ttcaaccgcaatgctgcaaagaactaccgctattgctgctcccctacaaagatgattcac
ctatcgacacttcctcaagacgtgacagaggaggaagtagtaaaccatgtgcaagaacat
ggggcaatagtgaacacaaaagtttttgagatgaacgggaaaaagcaggccctggtacag
tttgagaacgaggaggaagctgcagaaacattggtgtgcaagcacgcgacttctctaggc
ggatcaattatcagaatctccttctcccagctacagacgatttaa
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