Capsella rubella (pink shepherd's-purse): 17900565
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Entry
17900565 CDS
T02984
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
17900565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17900565
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
17900565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_At5g56370
F-box
LRR_At1g61320_AtMIF1
LRR_8
Motif
Other DBs
NCBI-GeneID:
17900565
NCBI-ProteinID:
XP_006305163
UniProt:
R0GQM4
LinkDB
All DBs
Position
Unknown
AA seq
362 aa
AA seq
DB search
MVMVGEEASSMELDQCFLKMKMEGISIKEWKDIPVELLMRILSLVDDRNVIVASGVCCGW
RDAISLGLTRLRLSWCNNNMNSLVLSLAPKFTKLQTLILRQDKPQLEDNAVEAIANHCRE
LQELDLSKSLKLTDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLRVLNLCG
CVNAVSDNALEAIGNNCNQMQSLNLGWCENISDEGVMSLAYGCPDLRTLDLCGCVLITDE
SVVALADWCVHLCSLGLYYCRNITDRAMYSLAQSGVKNKPGSWKSVKKGKYDEEGLRSLN
ISQCTALTPSAVQAVCDTFPALHTCSGRHSLVMSGCLSLTSVHCACILQAHRGHNAVPHP
AH
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggtaggagaagaagcatcatccatggaactggaccagtgttttcttaagatg
aagatggaaggaatctccatcaaagagtggaaagacatccctgtggagcttctgatgagg
atcctttcccttgttgatgaccgtaatgtcattgttgcttctggtgtttgttgtggctgg
agagatgctatctctcttggcctcactcgtctccgtctctcttggtgcaataacaacatg
aacagcttggttctttctcttgctcccaagtttaccaagctgcagactttaatactgcgg
caggacaaaccacagctagaggacaatgcagtggaggccatagcaaatcactgccgtgag
ctacaagagcttgatctcagcaaaagtttgaaactaactgatcgttccctctatgcactt
gctcatggttgccccgacctcacaaaactcaaccttagcggatgcacttcattcagcgac
actgctattgcgtatttgaccaggttctgcagaaagcttagagttttgaatctctgcgga
tgtgtcaatgctgtatctgacaatgccttagaggctattgggaataactgcaatcagatg
cagtcactaaatttgggatggtgtgagaatatcagtgatgaaggggtaatgagtttagct
tatggctgcccagatctcaggacgcttgacctctgtggctgtgttctaattacagatgag
agtgtggtagctctagcagactggtgtgtccacttgtgttcactggggttatactactgc
agaaacataacagacagggcgatgtactcactagctcaaagcggggtaaagaacaaaccg
ggttcatggaaatcagttaagaaagggaaatacgatgaagaagggcttagaagtctcaat
attagccaatgcacagcccttacaccttcagcggttcaagcagtttgcgacaccttccct
gctcttcacacatgttcaggaaggcattcgcttgtgatgagcggttgtctgagcttaaca
tctgtgcactgtgcttgtatccttcaggctcatcgcggacacaacgctgtacctcatccg
gctcactaa
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