Capsella rubella (pink shepherd's-purse): 17900832
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Entry
17900832 CDS
T02984
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
17900832
Enzymes [BR:
crb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
17900832
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
17900832
NCBI-ProteinID:
XP_006304407
UniProt:
R0IG29
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MSSVKLQLQDKGNHVVMDNGIARVTLSKPDGIVTGIEYNGIDNLLEVLNEEVNRGYWDLV
WGGSGTAGGFDVIKGTNFEVIMKNEEQIELSFTRKWDPSLEGKAVPLNIDKRFVMLRGSS
GFYTYAIYEHLKEWPAFSLAETRIAFKLRKDKFHYMAVTDDRQRFMPLPDDRLPDRGQAL
AYPEAVLLVNPVEPQFKGEVDDKYQYSCENKDITVHGWICTEQPSVGFWLITPSHEYRTG
GPQKQNLTSHVGPTSLAVFMSAHYSGEDLVPKFTEGEAWKKVFGPVFVYLNSSTDDENDP
LWLWQDAKSQMNVETESWPYSFPASDDYVKAEQRGNVVGRLLVQDRYVDTDFIAANRGYV
GLAVPGAAGSWQRECKEYQFWTRTDEEGFFYISGIRPGQYNLYAWVPGFIGDYKYDDIIT
ITSGCYIYMEDLVYQPRRNGETLWEIGFPDRSAAEFYVPDPNPKYINNLYKNHPDRFRQY
GLWERYAELYPDKDLVYVVGSSDYRKDWFYAQVTRRKDSKTYQGTTWQIKFELENIDKSQ
SYTLRVAIASATFSELQIRVNDATASPLFTSGLIGRDNSIARHGIHGLYWLFNVEVAGSK
LVEGENTLFLTQPRSTSPFQGIMYDYIRFEAPS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgttaaactgcagctgcaagataagggcaatcatgtggtgatggataatggc
attgcacgggttacattatcaaagcctgatggaattgttactggaatcgagtataatggc
attgataacttgcttgaggttcttaatgaagaagtcaacagagggtattgggatctcgtt
tggggaggatcaggaaccgctggtggatttgatgtaattaaaggaacaaactttgaggta
ataatgaagaacgaagagcaaattgagctttctttcacaagaaaatgggatccatcacta
gaaggcaaagcggtccctctgaacattgacaaaagatttgttatgcttcgtgggtcatca
ggattctacacttatgccatctacgagcatttaaaagaatggcctgctttctcacttgct
gaaacccgaattgccttcaagcttagaaaagacaagtttcactacatggcagtaacggac
gatagacagagattcatgccattgcctgatgaccggttacctgacagaggccaagctctg
gcttaccctgaagcggttctacttgttaatcctgtagagcctcaattcaaaggagaggtt
gatgataagtaccaatattcatgtgagaacaaagacattactgtccatggatggatatgc
acagagcagccatcggttggtttctggctcataactcctagccatgagtaccgaactggt
ggaccacaaaaacagaacttgacatctcacgttggacctacttctcttgctgtatttatg
agtgcacattactcaggggaagatctagtgccaaagtttactgaaggagaagcatggaag
aaggtgtttggacctgtattcgtctatttaaactcgtccactgatgatgagaatgaccct
ctttggctctggcaagatgctaaatctcagatgaacgtggaaactgaaagctggccttac
agttttccagcttcagatgattatgtgaaagcagagcaacgtggtaatgtggttggcaga
cttctcgtccaagacaggtatgtagatacagatttcattgcagccaatagaggttatgtt
ggcttggctgtgcctggagctgctggttcatggcaaagagaatgcaaggagtatcaattt
tggacaagaacagatgaagaaggattcttttacataagtggaatacggccaggacaatac
aatctctatgcatgggttcctggttttattggcgactataaatacgatgatattatcacc
atcacctcaggttgttatatatatatggaagatcttgtataccagcctcgaagaaatgga
gaaacattatgggagattggttttcctgatcgatccgccgcagagttttatgttcccgat
ccgaatccaaaatatatcaacaacctttataaaaatcaccctgacaggttccgacagtat
ggattatgggaaagatacgccgaactatatccggataaagacttggtatatgtagttggc
tctagcgactatagaaaagactggttttacgctcaagttactagaaggaaagatagcaaa
acatatcaaggaacaacctggcaaatcaaattcgaactcgaaaacattgataagagtcag
tcctatactttacgagtagccatcgcatccgctactttttcggaactccagatacgtgtg
aacgatgcaactgcgagcccattgttcaccagcggactgatcgggagagacaactcgata
gcaagacatggtatacatggactgtactggttgttcaatgtggaagtggctggctctaag
cttgtagaaggcgagaatacattgtttctcacacagccaaggtccacaagccctttccaa
gggatcatgtatgattacatccgattcgaagctcccagctaa
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