Capsella rubella (pink shepherd's-purse): 17900887
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Entry
17900887 CDS
T02984
Name
(RefSeq) protein transport Sec1a isoform X2
KO
K15292
syntaxin-binding protein 1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17900887
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17900887
Membrane trafficking [BR:
crb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
17900887
SNARE
SNARE associated proteins
Syntaxin-binding proteins
17900887
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
17900887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
DUF6643
Motif
Other DBs
NCBI-GeneID:
17900887
NCBI-ProteinID:
XP_006306940
UniProt:
R0IRD0
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MSFSDSESSSHGGDSYKFFRQISRDRLLHEMLGSTKTGDSKAWKILIMDRVTVKVMSQSC
KMADITDQGISLVEELFKRREPMPGMDAIYFIQPTKENIVMFLSDMSGREPLYRKAFIFF
SSTIPKELVNHIKSDSSVLPRIGALREMNMEYFPIDNQGFLTDHEQALETLYAEDAENSR
HFNICLNMMATRIATVFASLKELPFVRYRAAKSTATRDLVPSKLAAAIWDCISKYKAIPN
FPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLDMDGNKHVIEVPSKTGGPPEKKEI
VLEDHDPVWLELRHTHIADASERLHEKMTNFASKNKAAQMRSRDGSELSTRDLQKIVQAL
PQYGEQVDKLSTHVELAGKINRIIRDTGLRDLGQLEQDLVFGDAGAKDVINFLRTNQDTN
PENKLRLLMIYATEYPEKFEGDKGVKLMQLARLSPVDMKVISNMQLIAGSPDNKAKSGSF
SLKFDAGKTKQANRKDRSGEEETWQLFRFYPMIEELLEKLVKGDLSNSDYLCMNQSSHKE
ENEPRTGSVRKSSAPTAVPERKATPHSMRSRRTATWARPQSSDDGYSSESVLKSASTDFK
KLGQRIFVFIIGGATRSELRVCHKLTSSLRREVVLGSTSFDDPPQYITKLKLLSEKDLTG
APAQPFKPQYW
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccgattcagagtcatcctctcatgggggagattcctacaagttctttcgt
cagatcagccgcgatcgattgctacacgagatgcttggatctaccaaaaccggggattct
aaagcttggaagatactaataatggatagagttacggtcaaagtaatgtctcagtcttgc
aagatggcagatatcactgatcaaggcatttccttggttgaagaactttttaagaggagg
gaaccaatgcctggcatggacgctatctactttatccaacctaccaaagagaacattgtt
atgtttctatccgacatgtctggcagggaacctttgtataggaaggcatttatctttttc
agctccactatccccaaagaattggtcaatcacatcaaaagtgattcaagtgtattgcca
cgcattggtgcattaagagagatgaacatggagtatttccccatagataaccagggattt
ctaactgatcatgagcaagcattggaaactctctatgctgaagatgctgagaattcacgc
cactttaatatttgtttgaatatgatggctactagaattgctaccgtatttgcttcgttg
aaggaattaccctttgttcggtatcgagctgctaagtctacggctacgcgtgacttggtt
ccctcaaagcttgctgctgctatttgggattgtatctcaaaatataaagccattcccaac
tttccccagaccgaaacatgtgagctgctcattgtggatagatctgtggatcagatcgcg
cctatcatacatgaatggacctatgatgctatgtgccatgatttgcttgacatggatggg
aataaacatgtcattgaggttcctagtaaaactggtgggcctccagagaaaaaggagata
gtgcttgaagatcatgatccagtgtggcttgagcttcgacacacacacatagcagatgct
agcgagcgtttgcatgagaaaatgaccaactttgcttcaaagaacaaagccgcacaaatg
agatcaagggacggtagcgagttgtctacacgagatctgcagaaaatagttcaagctttg
ccacaatatggagaacaagttgacaaactctccactcacgtagagctagccggaaaaatt
aacagaataatcagagacacaggacttcgggatcttgggcagctggaacaagatcttgtt
tttggagacgcaggtgccaaggacgttatcaactttctgaggacaaatcaggacacaaac
ccagaaaacaaattacggctattgatgatttatgcaacagagtaccccgagaagtttgaa
ggtgacaagggtgtaaagctaatgcagcttgctagattatcacctgtggatatgaaggtt
ataagcaacatgcaattgatagctggatctccagacaacaaggctaaatccggtagtttc
tccctcaaatttgacgctggaaagacaaaacaagcaaacagaaaagaccgatctggtgaa
gaagaaacatggcaactgttccggttttatcccatgatcgaggagctgcttgagaaactc
gtgaaaggcgatctatctaatagcgactatctatgtatgaaccaatcaagtcataaggag
gaaaatgaaccaagaacaggatcagtaaggaagagttctgctcctacagcggttccagag
cgaaaagccacccctcattctatgaggtcaagaagaactgcaacttgggcgcgtcctcag
tcttctgacgatggatattccagtgaatcagtgttgaaaagtgcttcaacggacttcaag
aagttggggcaacgcatctttgtattcattattggcggggcaactcgatccgagctccga
gtttgccacaagttgacaagcagtttgaggagagaagtggtactaggctccactagtttc
gacgatcccccacagtacatcacgaagctgaaattgctgtcggaaaaagacttaacaggg
gcacctgctcagcccttcaaaccacaatactggtga
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