Candidatus Carsonella ruddii CS: A33Y_0171
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Entry
A33Y_0171 CDS
T02195
Symbol
rpoA
Name
(GenBank) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
crc
Candidatus Carsonella ruddii CS
Pathway
crc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
crc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A33Y_0171 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crc03021
]
A33Y_0171 (rpoA)
03400 DNA repair and recombination proteins [BR:
crc03400
]
A33Y_0171 (rpoA)
Enzymes [BR:
crc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A33Y_0171 (rpoA)
Transcription machinery [BR:
crc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A33Y_0171 (rpoA)
DNA repair and recombination proteins [BR:
crc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A33Y_0171 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AFP83808
UniProt:
J7GYX1
LinkDB
All DBs
Position
complement(127156..128121)
Genome browser
AA seq
321 aa
AA seq
DB search
MIFNKKIFFINKINIKKINNFRSIIRIEPFFNSYCDSIGNFIRRTLFLTSFCYYISHIKI
YNSNCIFSGIKGINEDVSTVIKNIKNIIFKIHNSSFAYLIIKKKGPCIVKAKDIFSDKKI
SIINPEKIIANINFEINFFVLMKCVHSSFKKIIDINFENKLFKSKVFFLKNFNISLLNIN
YYIHKKSINKKIKKLFLDIETNGSITPENCFKNCIFYIKKYFDLLFTILSFNNNNNIINN
NIINNNIINPLFLRSIDNLELSIRSSNCLKSHNIFCIGDLIIKNEIDLIKIPKFGLKSLN
EVKNLLLQKGLSLNMKINYEL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatttttaataaaaaaattttttttattaataaaataaatataaaaaaaattaataat
tttagatctattattagaatagaacctttttttaactcttattgtgattcaatagggaat
tttataagaagaactttatttttaacatcattttgttattatatttctcatataaaaata
tataattcaaattgtattttttctggaataaaaggtattaatgaagatgtttcaactgtt
ataaaaaatattaaaaatataatatttaaaatacataattcttcctttgcttatttaata
ataaaaaaaaaaggtccatgtattgttaaagcaaaagatattttttcagataaaaaaatt
tctattattaatcctgaaaaaattatagcaaatattaattttgaaataaatttttttgtt
ttaatgaaatgtgttcattcaagttttaaaaaaataattgatataaattttgaaaataaa
ttatttaaatcaaaagttttttttttaaaaaattttaatatatcattattaaatattaat
tattatatacataaaaaatcaataaataaaaaaataaaaaaactttttttagatattgaa
actaatggtagtataactccagaaaattgttttaaaaattgtattttttatataaaaaaa
tactttgatttgttatttacaattttaagttttaataataataataatataattaataat
aatataattaataataatataattaatcctctttttttaagatcaatagataatttagaa
ttaagtattagaagttctaattgtttaaaatcacataatattttttgtataggagattta
attataaaaaatgaaattgatttaattaaaatacctaaatttgggttaaaatcattaaac
gaagttaaaaatttacttttacaaaaaggtttatctttaaatatgaaaataaattatgaa
ttataa
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