KEGG   Chlamydomonas reinhardtii: CHLRE_01g007051v5
Entry
CHLRE_01g007051v5 CDS       T01039                                 
Name
(RefSeq) ribosomal protein L40
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03010  Ribosome
cre04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    CHLRE_01g007051v5
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    CHLRE_01g007051v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:cre03011]
    CHLRE_01g007051v5
   04121 Ubiquitin system [BR:cre04121]
    CHLRE_01g007051v5
Ribosome [BR:cre03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    CHLRE_01g007051v5
  Archaea
    CHLRE_01g007051v5
Ubiquitin system [BR:cre04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   CHLRE_01g007051v5
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 TBK1_ULD Plexin_RBD zf-C4pol Ubiquitin_5 DUF2604 Dsc3_N UBL_UBAC1 OTU1_UBXL TipE
Other DBs
NCBI-GeneID: 5725863
NCBI-ProteinID: XP_001700313
UniProt: P0CH11 P0CH10 A8JCX9
LinkDB
Position
1:1410568..1413489
AA seq 128 aa
MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLQALARKYNQEKMICRKCYARLHPRAKNCRKKSCGHTNQ
LRPKKKLK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcaaatcttcgtgaagaccctcacgggtaagaccatcaccctcgaggtggagtcttcg
gacaccatcgagaatgtgaaggccaagattcaggacaaggagggcatccctccggaccag
cagcgtctgatcttcgccggcaagcagctggaggacggccgcaccctggcggactacaac
atccagaaggagtccaccctccacctggtgctgcgtctgcgcggtggtatcattgagccc
tcgctgcaggccctggcccgcaagtacaaccaggagaagatgatctgccgcaagtgctac
gcccgcctgcacccgcgcgccaagaactgccgcaagaagtcgtgcggccacaccaaccag
ctgcgccccaagaagaagctcaagtaa

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