Chlamydomonas reinhardtii: CHLRE_01g016050v5 Help Entry CHLRE_01g016050v5 CDS       T01039                                  Name (RefSeq) uncharacterized protein   KO K12856   pre-mRNA-processing factor 8 Organism cre  Chlamydomonas reinhardtii Pathway cre03040   Spliceosome Brite KEGG Orthology (KO) [BR:cre00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     CHLRE_01g016050v5  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:cre03041]     CHLRE_01g016050v5 Spliceosome [BR:cre03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     CHLRE_01g016050v5  Complex C    U5 SnRNP specific factors     CHLRE_01g016050v5 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PROCN PRP8_domainIV U6-snRNA_bdg PRO8NT U5_2-snRNA_bdg PROCT RRM_4 JAB Motif Other DBs NCBI-GeneID:  5715121 NCBI-ProteinID:  XP_042928306 UniProt:  A0A2K3E5Q8 Structure PDBPDBj LinkDB All DBs Position 1:2694480..2710860 Genome browser AA seq 2398 aa AA seqDB search MEGGGPPPPPGGFRPPMPPGGFPMGGMPPGMRPPMVAPHQTRYFNQMGGMAPVGGIPPPP MGQAPGGAPRPAGPPPVPVLSEELQQKLLEEKAKKWAQLNAKRYGDKRKFGFVEAPKEDM PPEHVRKIIRDHGDMSSRKFRHDKRVYLGALKFVPHAVFKLLENMPMPWEQVRHVKVIYH ITGAITFVNEIPWVIEPVYLAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADN LLDVEPLEAIEMELDEEEDAAVYEWLYDHQPLKYTKFVNGPSYKRWKLPLPVMAALYRLS GQLLTDFPDRNYFYLFEPQAFVTAKSLNMCIPGGPKFEPLFRDMDTRDEDWNEFNDINKL IIRSPIRTEYKVAFPYLYNNRPRKVRLSVYHHPMSLYIKTEDPDLPAYYYDPLIHPIAAY RSAAGGRRAKIEEEVGGDDDEWALPSGVEPLLGESPLYTDNTASGIALLWAPPPFNRRSG HTRRAFDVPLVNCWFQEHCPPTYPVKVRVSYQKLLKNYVLNLLHARPPKSVKKKYLLRAL KATKFFQSTELDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERK KSRFGNAFHLCREILRLTKLVVDANVQFRLGNVDAYQLADGLQYIFAHVGQLTGMYRYKY RLMRQIRMCKDLKHLIYYRFNTGPVGKGPGVGFWAPMWRVWLFFLRGIVPLLERWLGNLL ARQFEGRQSKGIAKTVTKQRIESHFDLELRAAVMHDILDMMPEGVKQNKARTILQHLSEA WRCWKANIPWKVPGLPAPVENMILRYVKQKADWWTNVAHYNRERIRRGATVDKTVCRKNL GRLTRLYLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKYSCIPFPPLNYKHDT KLLILALERLKEQYVVAVRLNSSQREELGLVEQAYDNPHEALQRIKRHLLTQRSFKEVAI EFMDLYSHLIPVYEIEPLEKITDCYLDQYLWFEADNRHLFPCWVKPADSEPPPLLVYKWC HGINNVTNVWDTNAGECVVMMQSEFEKMYDKIDLTLMNRLLRLIVDHNIADYITAKNNVV IAYKDMSHTNSYGLIRGLQFASFIIQYYGLILDLLLLGLTRATEIAGPPQCPNEFLTYRD VKTETRHPIRLYSRYLNKVHIMFRFSAEEAKDLIQRYLTEHPDPNNENIVGYNNKKCWPR DARMRLMKHDVNLGRAVFWDMKNRLPRSLTTFEWDNSFVSVYSRDNPNLLFSMLGFEVRI LPKIRMAAESFANKDGVWALQNVHTKERTAQAFLRVDDEGLKSFENRVRQVLMSSGSTTF TKIANKWNTALIGLMTYYREAVLHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVF YSPKEVGGLGMLSMGHILIPQSDLRYSQQTDLGVTHFRAGMSHEEDQLIPNLYRYIQPWE SEFMDSERVWSEYALKKEEAKAQNRRLTLDDLDDSWDRGIPRINTLFQKDRHTLAYDRGW RVRQEMKMFQITKMNPFWWTHQKHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFP TWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLD LTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELDALEIETVQKETIHP RKSYKMNSSCADILLFAAYKWNMSKPSLMADTNDVYDQKPGNKYWVDVQLRWGDYDSHDI ERYTRAKFLDYTTDNMSIYPSPTGVMIGIDLAYNLHSAYGNWFPGIKPLVIQAMAKIMKS NPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQTVWFVDDTNVYRVTIHKTFEG NLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLSQLAKWKTAEEVAALVRSLPVEE QPKRIIVTRKGMLDPLEVHLLDFPNIVITGSELQLPFQAAIKLEKFGDLILKATEPQMVL FNIYDDWLKTISSYTAFSRLILILRALHVNPEKARMILRPDKSIVTQPHHVWPSLTDEQW IKVEVALKDLILADYGKKNNVNTQALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAREG GHMTAVTTKTTNVHGDDLIVTTTSPYEQAAFGSKTEWRVRAISAANLHLRVNHIYVNSDD IRESGYTYVLPKNLLKKFICIADLRTQIAGYMYGVSPPDNAAVKEIRAIVMPPQWGNHQL VNLPANLPEHDYLKDLEPLGWIHTQPNELPQMSPQDVVATAKMLEAHRSWDGERCVCVTV SFTPGSCSLTAYKLTPGGYEWGRSNKDVAANPQGYKPDFYEKSQLLLSDRFMGFYMVPDA GSWNYNFMGVKHSPAMRYGLKLANPREFYHEVHRPTHFLEFSTLEDADPGVDVENHFA NT seq 7197 nt NT seq  +upstreamnt  +downstreamnt atggagggcggcggcccaccgccacctcccgggggcttccggcccccgatgcccccgggc ggctttccgatgggtggaatgcctcctggcatgcgtccgccaatggtggcaccgcaccag actagatacttcaaccaaatgggcggcatggcaccggtgggcggcatcccgcccccgccg atgggccaggcgcccggtggagcgccccggccggccggcccaccaccggtgccagtgctt tcggaggagctgcagcagaagctactggaggagaaggccaagaagtgggcccagctgaac gccaagcgctacggcgacaagcgcaagttcgggttcgtggaggctcccaaggaggacatg ccgcccgagcacgtgcgcaagattatcagggaccacggcgacatgagcagccgcaagttc cggcacgacaagcgcgtgtacctgggcgcgctcaagttcgtgccgcacgccgtgttcaag ctgcttgagaacatgcccatgccctgggagcaggttcggcacgtcaaggtgatctaccac atcaccggcgccatcacgtttgtgaacgagatcccctgggtcatcgagccggtgtacctg gcgcagtggggcagcatgtggatcatgatgcgccgcgagaagcgcgaccgccgccacttc aagcgcatgcgcttcccgccctttgacgacgaggagccgccgctggactacgcggacaac ctgctggacgtggagccgctggaggccattgagatggagctggacgaggaggaggacgcc gccgtgtacgagtggctctacgaccaccagccgcttaagtacaccaagttcgtgaacggc cccagctacaagcgctggaagctgccgctgccggtgatggccgcgctgtaccgcctgagc ggccagctgctgaccgacttccccgaccgcaactacttctacctcttcgagccgcaggcg tttgtgaccgccaagagcctgaacatgtgcatccccggcggccccaagttcgagccgctg ttccgcgacatggacacgcgcgacgaggactggaacgagttcaacgacatcaacaagctc atcatccgcagccccatccgcacagagtacaaggtggcgttcccctacctgtacaacaac cggccgcgcaaggtgcggctgagcgtgtaccaccaccccatgtcgttgtacatcaagacc gaggaccccgacctgccagcctactactacgacccgctcatccaccccatcgccgcctac cgctccgcggcgggcggccgccgggccaagatcgaggaggaggtgggcggcgacgacgac gagtgggcgctgccgtccggcgtggagccgctgctgggtgagagcccgctgtacacggac aacaccgcgtctggcattgcgctgctgtgggcgccgccgcccttcaaccggcgcagcggc cacacgcgccgcgccttcgacgtgccgctggtcaactgctggttccaggagcactgcccg cccacctaccccgtcaaggtgcgcgtgagctaccagaagctgctgaagaactacgtgctc aacctgctgcacgcgcggccgcccaagagcgtgaagaagaagtacctgctgcgcgcgctc aaggccaccaagttcttccagtccacggagctggactgggtggaggtcgggctgcaggtg tgccgccagggctacaacatgctcaacctgctcatccaccgcaagaacctcaactacctg cacttggactacaacttcaacctcaagcccgtcaagacgctcaccaccaaggagcgcaag aagagccgcttcggcaacgccttccacttgtgccgcgagatcctgcgcctcaccaagctt gttgtggacgccaacgtgcagttccgcctgggcaacgtcgacgcctaccagctggcggac ggcctgcagtacatcttcgcccacgtggggcagctgaccggcatgtaccgctacaagtac aggctgatgcggcagatccgcatgtgcaaggacctgaagcacctcatctactaccgcttc aacaccggtcctgtgggcaagggccctggtgtgggcttctgggcgcccatgtggcgcgtg tggctgttcttcctgcgcggcattgtgccactcctggagcgctggctgggcaacctgctg gcgcgtcagttcgagggccgccagtccaagggcatcgccaagaccgtcaccaagcagcgc atcgagtcgcactttgacctggagctgcgcgccgcggtgatgcacgacatcctggacatg atgcccgagggcgtcaagcagaacaaggcgcgcaccatcctgcagcacctgtcggaggcg tggcgctgctggaaggccaacatcccctggaaggtgccggggctgccggcgcccgtggag aacatgatcctgcgctacgtgaagcagaaggcggactggtggaccaatgtggcgcactac aaccgcgagcgcatccggcgcggcgccaccgtggacaagacggtgtgccgcaagaacctg ggccgcctcacgcgcctgtacctcaaggccgagcaggagcgccagcacaactacctcaag gacggcccctacgtgacgcccgaggaggcggtggccatctacaccaccaccgtgcactgg ctggagagtcgcaagtacagctgcattcccttcccgccgctcaactacaagcacgacacc aagctgctcatcctggcgctggagcggctcaaggagcagtacgtggtggcggtgcgcctg aactcgtcgcagcgcgaggagctgggcctggtggagcaggcgtacgacaacccgcatgag gcgctgcagcgcatcaagcgccacctgctgacgcagcgctccttcaaggaggtggccatc gagttcatggacctctactcgcacctcatcccggtgtacgagatcgagccgctggagaag atcacggactgctacctggaccagtacttgtggttcgaggccgacaaccgccacctgttc ccctgctgggtcaagccggcggacagcgagccgccgccgctgctggtgtacaagtggtgc cacggcatcaacaacgtgaccaacgtgtgggacaccaacgcgggcgagtgcgtggtcatg atgcagagcgagtttgagaagatgtacgacaagatcgacctcacgctcatgaacaggctg ctgcgcctgatcgtggaccacaacatcgcggactacatcaccgccaagaacaacgtggtc atcgcctacaaggacatgagccacaccaacagctacggcctcatccgcggcctgcagttc gccagcttcatcatccagtactacggcctgatcctggacctgctgctgctgggcctgacg cgcgccaccgagatcgccggcccgccacagtgccccaacgagttcctcacctaccgcgac gtcaagaccgagacgcgccaccccatccgcctctacagccgctacctcaacaaggtgcac atcatgttcaggttctcggctgaggaggccaaggacctgatccagcgctacctgaccgag caccccgaccccaacaacgagaacatcgtgggctacaacaacaagaagtgctggccgcgc gacgcgcgcatgcggctgatgaagcacgacgtgaacctgggccgcgccgtgttctgggac atgaagaaccgcctgccgcgcagcctcaccacctttgagtgggacaacagcttcgtgtcc gtgtacagccgcgacaaccccaacctgctcttctccatgctgggcttcgaggtgcgcatc ctgcccaagatccgcatggccgccgagtccttcgccaacaaggacggcgtgtgggcgctg cagaacgtgcacaccaaggagcgcacggcgcaggccttcctgcgcgtggacgacgagggc ctcaagtcctttgagaaccgcgtgcgccaagtgctgatgagctccggctccaccaccttc accaagatcgccaacaagtggaacacggcgctcatcgggctgatgacctactaccgcgag gcggtgctgcacacgcaggagctgctggacctgctggtcaagtgcgagaacaagatccag acgcgcatcaagatcggcctcaactccaagatgccctcgcgcttcccgcccgtggtgttc tacagccccaaggaggtgggcgggctgggcatgctgtccatgggccacatcctcatcccg cagtccgacctgcgctacagccagcagaccgacctgggtgtgacgcacttccgcgccggc atgagccacgaggaggaccagctcatccccaacctctaccgctacatccagccgtgggag tctgagttcatggacagcgagcgcgtgtggtcggagtacgcgctgaagaaggaggaggcc aaggcgcagaaccgccgcctgaccctggacgacctggacgactcgtgggaccgcggcatc ccgcgcatcaacacgctgttccagaaggaccgccacacgctggcgtacgaccgcggctgg cgcgtgcggcaggagatgaagatgttccagatcaccaagatgaaccccttctggtggacg caccagaagcacgacggcaagctgtggaacctgaacaactaccgcaccgacgtcatccag gcgctgggcggtgtggagggcatcctggagcacacgctgttcaagggcacctacttcccc acctgggagggcctgttctgggagaaggcgtcgggcttcgaggagagcatgaagtacaag aagctgacgaacgcgcagcgctccggtctgaaccagatccccaaccgtcgcttcacgctg tggtggagccccaccatcaaccgcgccaacgtgtacgtgggcttccaggtgcagctggac ctgaccggcatcttcatgcacggcaagatccccacgctcaagatctcgctcatccagatc ttccgcgcccacttgtggcagaagatccacgagagcgtggtgatggacctgtgccaggtg ttcgaccaggagctggacgcgctggagatcgagacggtgcagaaggagaccatccacccg cgcaagagctacaagatgaactcctcctgcgccgacatcctgctgttcgcggcgtacaag tggaacatgagcaagccctcgctcatggccgacaccaacgacgtgtacgaccagaagcct ggcaacaagtactgggtggacgtgcagctgcgctggggcgactatgacagccacgacatc gagcgctacacgcgcgccaagttcctggactacaccacggacaacatgtccatctacccc tcgcccaccggcgtgatgatcggcattgacctggcctacaacctgcacagcgcctacggc aactggttccccggcatcaagccgctggtgatccaggccatggccaagatcatgaagtcc aacccggcgctgtacgtgctgcgcgagcgcatccgcaagggcctgcagctctacagctcc gagcccacggagccctacctgtccagccagaactacggcgagctgttcagcaaccagacg gtgtggttcgtggacgacaccaacgtgtaccgcgtcaccatccacaagaccttcgagggc aacctgaccaccaagcccatcaacggcgccatcttcatcttcaacccgcgcaccggccag ctgttcctcaagatcatccacaccagcgtgtgggcgggccagaagcgcctgagccagctg gccaagtggaagacggcggaggaggtggcggcgctggtgcgctcgctgccggtggaggag cagcccaagcgcatcatcgtgacgcgcaagggcatgttggacccgctggaggtgcacctg ctggacttccccaacatcgtcatcaccggctccgagctgcagctgcccttccaggcggcc atcaagctggagaagttcggcgacctgatcctcaaggccacggagccgcagatggtgctg ttcaacatctacgacgactggctcaagaccatctcctcctacaccgccttcagccgcctc atcctcatcctgcgcgcgctgcacgtgaacccggagaaggcgcgcatgatcctgcgcccc gacaagtccatcgtgacgcagccgcaccacgtgtggcccagcctgacggacgagcagtgg atcaaggtggaggtggcgctcaaggacctcatcctggcggactacggcaagaagaacaac gtcaacacgcaggcgctgacgcagagcgagatccgcgacatcatcctgggcgcggaaatc acgccgcccagccagcagcggcagcagattgcggagatcgagaagcaggcgcgcgagggc ggccacatgacggccgtcaccaccaagaccaccaacgtgcacggagacgacctcattgtc accaccacgtcgccctacgagcaggccgcgttcggcagcaagaccgagtggcgcgtgcgc gccatctccgcggccaacctgcacctgcgcgtcaaccacatctacgtcaacagcgacgac atccgcgagagcggctacacctacgtgctgcccaagaacctgctgaagaagttcatctgc atcgccgacctgcgcacccagatcgccggctacatgtacggcgtgtcgccgcccgacaac gccgctgtcaaggagatccgcgccatcgtgatgccgccgcagtggggcaaccaccagctg gtcaacctacctgctaacctgccggagcacgactacctcaaggacctggagccgctgggc tggatccacacgcagcccaacgagctgccgcagatgtcgccgcaggacgtggtggccacc gccaagatgctggaggcgcaccgcagctgggacggggagcgctgcgtgtgcgtgacggtc agcttcacgccgggcagctgctcgctgacggcgtacaagctgacgccgggtggctacgag tggggccgcagcaacaaggacgtggcagccaacccgcagggctacaagccggacttctac gagaagtctcagctgctgctgtcggaccgcttcatgggcttctacatggtgccagacgcc ggctcctggaactacaacttcatgggcgtcaagcacagcccggccatgcgctacggcctc aagctggccaacccgcgcgagttctaccacgaggtgcacaggcccacccacttcttggag ttctccacgctggaggacgccgacccgggcgtggacgtggagaaccacttcgcctag

DBGET integrated database retrieval system