Chlamydomonas reinhardtii: CHLRE_01g028200v5
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Entry
CHLRE_01g028200v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHLRE_01g028200v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cre03041
]
CHLRE_01g028200v5
03009 Ribosome biogenesis [BR:
cre03009
]
CHLRE_01g028200v5
Enzymes [BR:
cre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CHLRE_01g028200v5
Spliceosome [BR:
cre03041
]
Complex A
U1 snRNP components
U1 related factors
CHLRE_01g028200v5
Complex B
CHLRE_01g028200v5
Ribosome biogenesis [BR:
cre03009
]
Eukaryotic type
Pre-60S particles
Helicases
CHLRE_01g028200v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
5715321
NCBI-ProteinID:
XP_001690022
UniProt:
A0A2K3E6L2
LinkDB
All DBs
Position
1:complement(4220737..4226132)
Genome browser
AA seq
479 aa
AA seq
DB search
MALPRPDFTNLPKFEKCFYLEHPAVSGRTPEEVEQYRREKQIHVYGDGVPKPVKTFEEAS
FPEYVLEEVLRAGFKEPTPIQCQGWPMALLGRDLIGLAETGSGKTLAYLLPAVVHINAQP
YLQSGDGPIVLVLAPTRELAVQIQQECQRFGASSRIKNTVVYGGAPKGPQARDLRGGVEI
VIATPGRLIDMLDSRITNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLLWSA
TWPKEVQAIARDFLKDPYQVIIGSPDLKANHNIRQVVEMVEGFAKYPRLRKLLDGEMDGR
RILIFVETKRGCDELVRQLRTDGYPALGLHGDKSQQERDWVLQEFKNGTHPIMLATDVAA
RGLDVKDIKVVVNYDMPKTAEDYVHRIGRTGRAGATGTAYSFFTNGDARLARQVVDVMQE
AGQQPPPELMQMMSFGGGGGGGFRGRGGGGGGGGHRGFGGGHGPSMTGSNAIPVATRRY
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaccccgccccgactttacgaacctgccaaagttcgagaaatgtttctacctg
gagcacccagccgttagcgggcggacacctgaggaggtggagcagtaccggcgcgaaaaa
cagattcacgtctacggggatggcgtgccgaagccggtgaagacgtttgaggaggcatct
ttccctgagtacgtgctggaggaggtgctgcgggcgggcttcaaggagccaacgcccatc
cagtgccagggctggccgatggccctgctgggccgcgacctcatcggcctggcggagacc
ggcagtggcaagacgctggcgtacctgctgccggccgtggtgcacatcaacgcgcagccc
tacctacagtccggcgatggccccatcgtgctggtgctggcgcccacgcgcgagctggcg
gttcagatccagcaggagtgccagcgcttcggcgcctccagccgcatcaagaacaccgtc
gtgtacggcggtgcgcccaagggcccccaggcgcgcgacctgcgcggcggcgtggagatc
gtcattgccacgccgggccgccttatcgacatgctggacagccgcatcaccaacctgcgg
cgtgtgacatacctggtgctggacgaggcggaccgcatgctggacatgggctttgagccg
cagatccgcaagattgtggaccagatccggcccgaccgccagacgctgctgtggtcggcg
acgtggcctaaggaggtgcaggccattgcgcgcgacttcctcaaggacccctaccaggtg
atcatcggctcgcccgacctcaaggccaaccacaacatccggcaggtggtggagatggtg
gagggcttcgccaagtacccgcgcctgcgcaagctgctggacggcgagatggacggcagg
cgtatcctcatcttcgtggagacaaagcgcggctgcgacgagctggtgcggcagctgcgc
acggacggctatccggcgcttggtctgcacggcgacaagagccagcaggagcgcgactgg
gtgctgcaggagttcaagaacggcacgcaccccatcatgctcgccacggacgtggccgca
cgtggactagacgtcaaggacatcaaggtggtggtgaactacgacatgcccaagacggcc
gaggactacgtgcaccgcatcggccgcacggggcgcgctggcgccactggcactgcctac
tccttcttcaccaacggcgacgcgcgcctggcgcggcaggtggtggacgtgatgcaggag
gctggtcagcagccgccgccggagctgatgcagatgatgtcgttcggcggcggaggcgga
ggcggcttccgcggccgtggtggtggtggcggcggtggtgggcaccgcggctttggcggc
ggtcatgggccgagcatgacgggctccaacgccattcccgtggcgacacggcggtactga
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