Chlamydomonas reinhardtii: CHLRE_01g051100v5
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Entry
CHLRE_01g051100v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K06063
SNW domain-containing protein 1
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHLRE_01g051100v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cre03041
]
CHLRE_01g051100v5
Spliceosome [BR:
cre03041
]
Complex B
Other components
Prp19-related factors
CHLRE_01g051100v5
Complex C
CHLRE_01g051100v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
FOP_dimer
Motif
Other DBs
NCBI-GeneID:
5715751
NCBI-ProteinID:
XP_042928880
UniProt:
A0A2K3E831
Structure
PDB
PDBj
LinkDB
All DBs
Position
1:7071856..7077573
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AA seq
684 aa
AA seq
DB search
MSLLGTLPAPQQKHAAPIAPVPASAAIVSASFKEPPPYLRRKGWVPRRAEDFGDGGAFPE
IHVAQYPLDMGKGSTGGKQQLAISVNEKGEINYDAVVKQGQNKDRVVHSDHGALVPKVDR
LSKEALARPDEEDVEKTVAETAAALERVVQGKLSSVNPTKLPGGPGGSTLIKYTPAQQGA
QYASGAGQRIIKMQDLPVDPLEPPKFRHVKVPRGPGSPPVPVLHSPPRPLTVKDQQDWKI
PPSISNWKNPKGYTIPLDKRLAADGRGLQQTQINDKFAALSEALFTAEAKAREAITMRAS
IQKELALKEKNKRETELRNLAMQARMERQGAPGAGAGAGGLPPPPPLAGRAEGSLPGPPP
GPPPRGAGGRATAADAFDDHEEDYDRRREPEPERERERERDRGGDRERGERDRDYDRDYD
RGERGGYDRERERDADRGGRGGGEDERYQESVAEREERRRRDEIREERRRERERERRLEA
ANQGGAKKSKITRDRERDISEKVALGMANVGGGGEVQYDQRLFNQDAGMQSGFGADDSYN
AYDKPLFADRGSHLFKASRATADDDEDAGGAAAGGDAGPRTERFKPDKGFQGAEGAPGAG
GGRGGGGRLEFERQQAEEADPFGLDQFLSEVKGGGRDRGGKGNALDAIGKRGGMSAAGGG
ASLDDLAGAGAGMGRRMQFTSGKG
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgctcggcaccttgccggctccccagcaaaagcacgcagccccgatcgctccg
gtgcctgcttctgcggcaatagtttcagcttcattcaaggagcctccgccttatttgcgg
cgcaagggctgggtgccccggcgagctgaggacttcggagatggcggagcctttcccgaa
attcatgtggcacagtatccacttgacatgggcaagggcagcactggcggcaagcagcag
ctagcaatcagcgttaacgagaagggcgagatcaattacgatgcggtggtcaagcagggg
cagaacaaggaccgcgtagtgcactcagaccatggcgcacttgtgccgaaggtggaccgg
ctcagcaaagaggcgctcgcacggcccgatgaggaggatgtggagaagacggttgcggag
acggcggctgcgctggagcgggtggtgcagggcaagctgtccagcgtcaaccctaccaag
ctgccgggcggcccgggcggctccacactcatcaagtacacgccggcgcagcaaggcgcg
cagtacgccagcggcgcgggccagcgcatcatcaagatgcaggacctgccggtggacccg
ctggagccgcccaagttccggcacgtcaaggtgccgcgcggccccggctcgccgcccgtg
cccgtgctacactcgccgccgcggccgctgacagtgaaggaccagcaggactggaagatc
ccgccctccatctccaactggaagaaccccaagggttacaccatcccgctggacaagcgc
ctggctgcggatgggcgcgggctgcagcagacgcagatcaacgacaagttcgcagcgctc
agtgaggcgctgttcacggcggaggccaaggcgcgagaggccatcaccatgcgcgccagc
atccagaaggagctcgcgcttaaggaaaagaacaagcgcgagacggagctgcggaacctg
gccatgcaggcgcgcatggagcggcaaggagcgccgggcgcgggggcgggagccggcggc
ttgccgcctcctccgcccttggcggggagagcggagggctcgctacccgggcctccgccc
gggccgccgccgcgcggcgccggcggccgcgccaccgccgcagatgcctttgacgaccac
gaggaggactacgaccgccgccgggagccggagccagagcgggagcgggagcgggagcgg
gaccgcggcggcgaccgggagcgcggcgagcgggaccgggactacgaccgggattatgac
cgcggcgagcgaggcggatacgaccgggagcgggagagggacgccgaccgcggcggccgg
ggcggcggtgaggacgagcggtaccaggagtcggtggcggagcgggaggagcggcggcgg
cgtgacgagatccgcgaggagcggcggagggagcgcgagcgggagcggcggctcgaggcc
gccaaccagggcggcgccaagaagagcaagatcactcgcgaccgggagcgcgacatcagc
gagaaggttgcgctgggcatggccaacgtgggcggcggcggcgaggtgcagtacgaccag
cgcctgttcaaccaggacgccggtatgcagtcgggctttggcgccgacgactcctacaac
gcctacgacaagccgctgttcgcggaccgcggcagccacctgttcaaggccagccgcgcc
accgcagacgacgacgaggacgccggcggcgcggcggcgggcggggacgcggggccgcgc
accgagcgcttcaagcccgacaagggcttccagggcgcggagggggcgcccggggctggt
ggcggccgcggtggtggcgggcggctggagttcgagcggcagcaggcggaggaggcggac
ccttttggcctcgaccagttcctcagcgaggtcaagggcggcggccgcgaccgcggcggc
aagggcaatgccctggacgccatcggcaagcgcggcggcatgagtgcggcgggcggcggc
gcctcactggacgacctggcgggcgcgggcgcgggcatgggccgccgcatgcagttcacc
agcggcaaggggtag
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integrated database retrieval system