Chlamydomonas reinhardtii: CHLRE_01g051550v5 Help Entry CHLRE_01g051550v5 CDS       T01039                                  Name (RefSeq) uncharacterized protein   KO K20101   ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] Organism cre  Chlamydomonas reinhardtii Brite KEGG Orthology (KO) [BR:cre00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cre03019]     CHLRE_01g051550v5 Enzymes [BR:cre01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      CHLRE_01g051550v5 Messenger RNA biogenesis [BR:cre03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Other surveillance factors      CHLRE_01g051550v5 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Helicase_C HA2_C OB_NTP_bind DEAD zf-C2H2_DHX34 AAA_22 HA2_N AAA_19 Motif Other DBs NCBI-GeneID:  5715759 NCBI-ProteinID:  XP_042928890 UniProt:  A0A2K3E844 LinkDB All DBs Position 1:7124716..7139845 Genome browser AA seq 1609 aa AA seqDB search MSANDEPEFSKYQRELDEAFHRRDDPCPAGTPEHAELLAFVAKLAKFRRSRPEPLADAPG SVASNPELAAQLGLPSTYDPRFRLPASLLAPPERVGAAVRAIARRMAQRAAAAAGSSSRD HGRERERERERDRERGRDRDRDRDRGGGGSGGSITSEIMEAATQVVEEYRRLLPWFEDFH QRRQMARLRKLQADRAALPAAAFRDAIVSALASSQALVVAGDTGCGKSTQIPQYLAAAGY RRIAVTQPRRISAVSLARRVAVEAGDTHGSTVGFKVRFSSSVAGSTRIVFCTEGILLREL AGDPLLSGYDVVVLDEVHERHLTTDFLLALLRALLLQRPELRLVLMSATINCAAFADYFG GAPIVQIPGRLYPIQLVYVPPEGAASEDARKRGGAGGSRGGGGGGSSSARGGSGRGGGGA GSDQIDPAPYLRLLQRIDTEVPSSQRGDLLVFVAGTADIAALCAALAPYAEQTRRWVILP LHAALPLEAQEKVFDVPPDGVRKAIISTNIAETSLTIDGVRFVCDSGRAKEMIHDVASGG GSLQEGWISRASADQRKGRAGRTGPGVCYRIYTEAQYDDMRPFSAPEIARVRLEAVVLGI KALAGGGMDPRAFGFIDPPPPDRLEASITTLKQIGALTLDGREGLTPLGAVLSLLPVDPA VGKLLVLSAVFGLAGPALTLAAALSVQSPFLKLGEEEHDQEAKAARASLVSPHGDPLTLL NVFETWLAIKEGGSGGVDRGDDRDRRDRGGGGGDQRHGGWDRGDRRGGGGGGSGSSSRWC RRHGLAEARLYEMAKLRAQFAELLADAGILRAGGGTALSAAEVSARRRRHLQHQRGRKGG TAGLRGAELHAAKRRLRDMQAERERKRGRKVLKVDKSGGRGGTGGDGSGDSSSDGEGGSG SSSGEEQLEALHDLDLRVHVDVKSMAAEASRPLTPADVGLLRHLLAVCLYPRIAVGDEAN PQRRDADCRFFTATGASDLVLHPGSVLAGAANEVPRGQVLAYTELIETRRQYLSGLTPLW ALPALLLAARRLDCDVGCGRWLVDGWLLLRVHDGAGPKVLQQVLELRTSSNALVSGRLRA ARLAALTAVHVVDEDDEAADSNEIGADGGSAAAGMQGGGLPPPAVEAGASGTFQKGYAAV AAALPEELQPLLAGVMAQQAAWRESEARRRRRTQERERRRLQAQGVGRAPARDWREVEEE AAEEEEVERAEALQDSVMEDELARRLALDMWPCRYSLERLAPGNKVTAQFIIEQQPPWAP LSLQQQLLQQQSTNTGAAAPAAEEAIDKGGGFSGAESAGVSTDVLGVPRHTAGMWLTPWL RYGSLRGYESAMALHALQPALRKPWMCPGCGLRLVGTFSEVRTHVGGCTAVQGVDSHAVE TLGYAQAATGPVAAAASSSSATTPNAIDGRRGAVARGVIGAGGDVDDGPLATAAAAAARA ARELEQERERQGRRQDEAVTEGCSSSQLPIPAGCNQLPIPAAAGIDSAVDAEARLHEYLA SPVKWGRRRIAAPVGAALLVPPTTAAVLGSFRQMASGPAMTGSGDAGVLPKVLPPPPPLP QDMAPGARATAAAAPPPPLASARMYTCPVCGLEQMLTPPQILQHRRLHG NT seq 4830 nt NT seq  +upstreamnt  +downstreamnt atgtctgctaatgatgagccggaattctccaaatatcagcgcgagctggacgaggcgttc caccgccgggacgacccctgccctgcgggcacgccagagcacgccgagttgctggcgttc gtggcaaagctcgccaagtttcggaggagcaggcccgagccgctagcggacgcccccggg tcggtggcttccaaccccgagctagctgcccagctgggtctgccctctacctatgacccc cgcttccggctgcctgcctccctgctggcgccgccagagcgtgtgggcgctgccgtgagg gcaatagcccgacgcatggcgcaacgcgccgctgctgctgccggcagcagcagcagggac catgggagggagcgagagcgggaacgggagcgggatagggagcggggcagagacagagac agagaccgagaccgtggtggaggtggctctggcggcagtatcacgtcagagattatggag gcggccacgcaggtggttgaggagtacaggcggctgctgccctggttcgaggacttccac cagcgccgccagatggctcggctgcgcaagctgcaggccgaccgggcggcgctgccggcg gcggcgttccgggacgccattgtgtcggcgctggccagctcgcaggcactggtggtcgcg ggcgacacgggctgcggcaagagcacccaaatcccacagtacctggccgcggccgggtac cggcgcattgccgttacacagccacgccgcatcagtgctgtcagcctggcgcggcgcgtg gcggttgaggcgggcgacacgcacggcagtactgtgggcttcaaggttcggttcagcagc agtgtggcaggctcaacgcgcatcgtgttctgcaccgagggcatactgctgcgcgagctg gccggagacccgctgctgagcggctacgacgtggtggtcctggacgaggtgcacgagcgg cacctcaccacggacttcctgctggcgctgctgcgcgccctgctactgcagcggccggag ctgcggctggtgctcatgtccgcaaccatcaactgcgccgccttcgctgactatttcggc ggtgcccccatcgtgcagatccccggccgcctgtaccccatccagctggtgtatgtgccg ccggagggcgccgcttcagaggatgcccgaaagcgtggcggtgccggtggcagcagaggc ggcggcggcggcggcagtagcagcgccaggggcggcagtgggcggggtggcggcggagca gggtcggaccagatcgacccagcgccctacctgcggctgctgcagcgcattgacacggag gtgccctccagccagcgcggcgacctcctggtgttcgtggcgggcacggcggacatcgcc gcgctgtgcgcagccctggcgccgtacgcggagcagacgcggaggtgggtcatcctgccg ctgcacgccgcgttaccgctggaggcgcaggaaaaggtgtttgacgtgccaccagatggc gtgcggaaggccatcatctccaccaacattgccgagacgtcgctcaccattgacggcgtg cgcttcgtgtgcgacagcggccgagccaaggagatgatccacgacgtggccagcggggga ggcagcctgcaggagggatggattagccgggcaagtgccgaccagcggaagggccgagcc ggccgcacggggcccggcgtgtgctaccgcatctacacggaggctcagtacgacgacatg aggcctttcagcgcgcccgagattgcacgtgtgcggctagaggcggtggtgctgggcatc aaggcgctggcgggcggcggcatggacccgcgggcctttggcttcatcgacccgccgccg cccgaccggctggaggcatccatcaccaccctgaagcagatcggcgcactgacgcttgac gggcgcgagggcctgacgccgctgggcgccgtgctgagcctgctgccggtggacccggcc gtgggcaagctgctggtgctgtcggccgtgtttgggctcgcgggccccgccttgacgctg gctgccgcgctatcggtgcagtcgcccttcctcaagctaggcgaggaggagcacgaccag gaggccaaggccgcccgcgcctcactggtgtccccccacggcgacccgctcacgctgctc aatgtgtttgagacctggctggccatcaaggagggcgggagcggaggagttgaccggggt gacgacagagaccggcgagacaggggcggcggcgggggcgatcaacgccatggtggctgg gacagaggcgaccgccgcggcggcggcggcggcggctctgggtcttcttcgcgctggtgc cggcgccacggcctggccgaggcgcggctgtacgagatggccaagctgagggcccagttc gcggagctgctggcggacgcgggcattctgagggcgggcggtggcacagctctgtccgct gctgaggtcagcgcacggcggcggcgccaccttcagcaccagcggggccgcaagggcggt actgcaggcctgcgcggagccgagttgcatgcggccaagcggcgcctacgggacatgcag gcggaacgtgagcggaagcgtggccggaaggtccttaaggtggataagtccggtggccgt ggtggcactggtggagacggcagtggcgacagtagcagcgatggcgagggcggcagcggc agtagcagcggcgaggagcagctggaggcgctccatgacctggacctgcgagtgcacgtg gatgtcaagtccatggcggcggaggcttctcggccgctgacgcctgcggatgtggggctc ctgcgccatctgctggccgtgtgcctctacccgcgcattgcggtgggcgacgaggccaac ccgcaacggcgcgacgcggactgccggttcttcaccgccaccggggcgtcagacctggtg ctgcacccgggcagtgtgctggcgggcgccgccaacgaggtgccgcgagggcaggtgctg gcgtacaccgagctcattgagacccggcgccagtacctgtctggactcacgccgctgtgg gctctgccagcactgctgctggcggcgcggcggctggactgtgatgtggggtgcgggcgc tggctggtggacggctggctactgctcagggtacacgatggcgcggggcccaaggtgctg cagcaggtgctagagctgcgtaccagctcaaatgcgctggtgagtggccggctgcgtgcg gcgcggctggcggcactgactgccgtacacgtcgttgatgaggatgacgaggcggctgac agcaatgaaattggtgctgatggcggctcagcagcagctgggatgcaggggggcgggctg ccaccaccagcagtggaggccggggcaagcggcaccttccagaagggctatgcagctgtg gccgccgcacttccagaggagctgcagcctctgcttgccggggtgatggctcagcaggct gcctggcgtgagtcagaggccaggcgccgccgccgcacccaggagcgtgaacgccgccgg cttcaggcgcaaggcgttggcagagcacctgctcgggactggcgggaggtggaggaggag gctgcagaggaggaggaagtagagcgggcggaggcgctgcaggacagtgtgatggaggac gaactggcgcggcgactggcactggacatgtggccatgcaggtactcacttgagcggcta gccccgggaaacaaggtcactgctcagttcatcattgagcagcaaccgccttgggcacca ctgtcactgcaacaacagctgttgcagcagcaaagcaccaatactggtgctgcagcaccg gctgcagaggaagcaatcgataagggtggtggctttagtggtgcagagtcagcgggcgtg agcacagatgtgctgggtgttccacgccacactgcaggcatgtggctcacgccgtggctc aggtacggcagcctgcgtggctacgagtcggccatggccctccatgcgctgcagccagca ctgcgaaagccatggatgtgccctggctgtggcctgaggctggtgggcacgttcagcgag gtgcggacacatgtggggggctgcaccgccgtccagggtgtggattcgcacgctgtggag acgctgggctatgcacaggcagccactgggcctgttgcggcagcagcaagcagtagcagc gcaacaacacccaatgccattgatggtcggcgtggtgcagtagcaaggggtgtcattggg gcagggggtgacgttgatgatgggcctctggccacagcagctgcagcagcagcacgggct gcacgagagcttgaacaggagagggagaggcaaggtaggcggcaagatgaagctgtgaca gagggctgcagcagcagccagcttccaataccagcaggctgcaaccagcttccaatacca gcagccgctggcattgacagtgcagtggatgcagaagcacggctacatgagtacctggca tcccctgtcaagtggggccggcggcgcattgctgcacctgtgggggcagcactgcttgtg ccacctaccacagcggcagtattgggcagctttaggcagatggcttctggtccagccatg acaggcagtggcgatgctggagtgctgccaaaggtattgccacccccgcctccactgccc caggacatggcacccggggcacgggcaacagcagcagcagcaccaccaccaccattagct tctgctcggatgtacacgtgtccagtgtgcggactggagcagatgctcacaccaccacag attctgcagcacaggcgcttgcatggctag

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