KEGG   Chlamydomonas reinhardtii: CHLRE_03g157300v5
Entry
CHLRE_03g157300v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CHLRE_03g157300v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cre03019]
    CHLRE_03g157300v5
Messenger RNA biogenesis [BR:cre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CHLRE_03g157300v5
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     CHLRE_03g157300v5
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 5723043
NCBI-ProteinID: XP_001697447
UniProt: A0A2K3DW42
LinkDB
Position
3:complement(2159534..2161545)
AA seq 263 aa
MEVEFALLRDIVEDYPYIAMDTEFPGVVAKPIGTFKSSREYLYKALKMNVDMLKLIQLGL
TLTDAKGTLPRAANGELCVWQFNFKGFKLSDDVYAQDSIELLKQSGIDFALHEARGIDVH
RFGELLMTSGIVLNDDVRWITFHSNYDFGYLLKILTCQPLPGTEQEFFELLNIYFPNIFD
IKYLMRYCDNLHGGLNKLAEMLDVQRIGPQHQAGSDSLLTSATFIKLANKYFHGIDGASK
HMGVLFGLGVDGAPESKGQDNGS
NT seq 792 nt   +upstreamnt  +downstreamnt
atggaggtggagtttgcgctgctgcgggacatcgtggaggactacccctacatcgccatg
gacacggagttcccgggcgtggttgctaagccaattggcacgtttaagagcagcagggag
tacctgtacaaggcattgaagatgaacgtggacatgctgaagctcatacagctgggactg
acccttaccgacgccaagggtaccctgccgcgagcagccaacggcgagctttgcgtgtgg
cagtttaacttcaagggcttcaagctctcggacgacgtctacgcgcaggacagtattgag
ctgctcaagcagtcggggatcgacttcgcgctgcatgaagcgcgtggcattgacgtgcac
cgctttggcgagctgctcatgacctcgggcatcgtcctgaacgacgacgtgcgctggatc
acgttccacagcaactacgacttcgggtacctgctcaaaatcctcacctgccagcccctg
cccggcacggagcaggagttcttcgagctcctcaacatctatttccccaacatcttcgac
attaagtacctcatgcgttactgtgacaacctgcacggcgggctgaacaagctggcggag
atgctcgacgtgcaacgcatcggcccccagcaccaggccggctcggacagcctcttgaca
tcggccacgttcatcaaactggctaacaagtacttccacggcattgacggcgcttccaaa
cacatgggcgtgctgtttggcctgggcgtggacggtgcacccgagtcgaagggccaggac
aacggctcgtga

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