Chlamydomonas reinhardtii: CHLRE_03g158750v5
Help
Entry
CHLRE_03g158750v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHLRE_03g158750v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cre03041
]
CHLRE_03g158750v5
03009 Ribosome biogenesis [BR:
cre03009
]
CHLRE_03g158750v5
Enzymes [BR:
cre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CHLRE_03g158750v5
Spliceosome [BR:
cre03041
]
Complex A
U1 snRNP components
U1 related factors
CHLRE_03g158750v5
Complex B
CHLRE_03g158750v5
Ribosome biogenesis [BR:
cre03009
]
Eukaryotic type
Pre-60S particles
Helicases
CHLRE_03g158750v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SNF2-rel_dom
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
5723019
NCBI-ProteinID:
XP_042925782
UniProt:
A0A2K3DW82
LinkDB
All DBs
Position
3:complement(2375537..2381019)
Genome browser
AA seq
570 aa
AA seq
DB search
MPYVPPHLRGKQSESAAPEPSSSSRAPEGGSSGFPRTPSHGNRLDSYDRRGDGGYGRQGS
GLPRTGSTQSFNRAPIEPVFNTWQPTSRVLSLSDDTIAEIRQRLKVTVEGTEDDKAASPI
ESFAEMNLHPNIVADIQHHKYETPTPIQAQGLPIALSGRDILGCAETGSGKTASFSIPMI
QHCLNQQPLRAGDGPMALVLAPTRELAQQIEREVKAFSRSSGRSVRTSIVVGGVPMHEQR
HDLRNGVEVVVATPGRFIDHLQQGNTNLGRISYVVLDEADRMLDMGFEPQIKEVMNNLPP
KHQTLLFSATMPKEIEELARAYLNKPVTVKIGAVSTPTANVSQRLEHAPEPQKLDILVAL
ISAEVAAEAAGGPPMPLTIVFVERKTRCDEVAAALREDGINANALHGGLNQNEREAALRD
FAKGDIKVLVATDVASRGLDIKGIGHVINMDLPKTFEDYVHRIGRTGRAGTKGRATSLWN
DRDSYLVAQIKQALSELEKGNGFAFATGKEARKEERQLAREFKSQLKMSSQGMVQTAGGS
AVKVDDKYAHMATAAPATAGTGVADAAWDD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgccctacgtgcctccccacttgcgtggcaagcagagcgagtctgctgcgcctgagccc
tcctcttctagccgcgcccccgaaggaggctcgtctggatttcctcgcacccctagccat
ggcaaccgtctagacagctacgataggcgtggagatggcgggtatgggcgccagggctcc
gggctgccccgcacgggctcgactcagagcttcaaccgggctccgattgagccggtgttc
aacacctggcagccaaccagccgcgtgctgtcgctgagcgacgataccatcgcggaaatc
cggcagcggcttaaggtcacggtggagggcacggaggatgataaggcagcgtctcctatt
gagtcgtttgccgaaatgaacctgcacccaaacatcgtggcggatattcagcaccacaag
tacgagacgcccacgccaattcaggcgcagggtctcccgatcgctctgtcggggcgcgac
atcctgggctgtgctgagacgggtagcggcaagaccgcctcgttctcaattcccatgatc
cagcattgcctgaaccagcagccgctgcgggctggggatgggcccatggcgctggtcctg
gcgcccactcgtgagctggcgcagcaaatcgagcgcgaggtgaaggcgttcagccgcagc
agcgggcgctcggtgcgtaccagcatcgtggtgggcggagtgcccatgcacgagcagcgc
cacgacctgcgcaacggcgtggaggtggtggtggccacgcctggccgcttcatcgaccac
ctgcagcagggcaacaccaacctgggccgcatctcgtatgtggtgctggacgaggcggac
cgcatgctggacatgggtttcgagccgcagattaaggaggtgatgaacaacctgccgccc
aagcaccagacgctgctgttcagtgccaccatgcccaaggagattgaggagctggcgcgg
gcgtacctcaacaagcccgtgactgtcaagatcggcgccgtgtcgacgcccaccgccaac
gtgtctcagcggctggagcacgcgccggagccgcagaagctggacatcctggtggcgctc
atctcggcggaggttgcggccgaggctgcaggcgggccgcccatgccgctgaccattgtt
ttcgtggagcggaagacgcgctgcgatgaggtggcggcggcgctgcgcgaggacggcatc
aatgccaacgccctgcacggcggtctcaaccagaatgagcgtgaggccgcgctgcgcgac
ttcgccaagggcgacatcaaggtgctggtggccaccgacgtggcctcccgcggcctggac
atcaagggcattggccacgtcatcaacatggacctgcccaagacctttgaggactacgtg
caccgcatcggtcgtaccggccgcgccggcaccaagggccgcgccacctcgctgtggaac
gaccgcgactcctacctggtggcgcagatcaagcaggcgctgtcggagctggagaagggc
aacggctttgctttcgccacgggcaaggaggcgcgcaaggaggagcgccagctggcccgc
gagttcaagtctcagctcaagatgtcgagccagggcatggtgcagacggcgggtggcagc
gccgtcaaggtggacgacaagtacgcgcacatggccaccgccgcacccgccaccgccggg
acaggcgtagctgacgcggcttgggacgactag
DBGET
integrated database retrieval system
