Chlamydomonas reinhardtii: CHLRE_03g160450v5
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Entry
CHLRE_03g160450v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cre04812
]
CHLRE_03g160450v5
Cytoskeleton proteins [BR:
cre04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
CHLRE_03g160450v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Katanin_con80
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_TEP1_C
eIF2A
Beta-prop_DCAF4
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_DCAF12
MIOS_WD40
Ge1_WD40
Beta-prop_NOL10_N
Beta-prop_RIG_1st
WDR54
Beta-prop_NUP159_NUP214
Beta-prop_LRRK2
Beta-prop_WDR11_2nd
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
5722989
NCBI-ProteinID:
XP_001697423
UniProt:
A8J7C9
LinkDB
All DBs
Position
3:complement(2574601..2578987)
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AA seq
798 aa
AA seq
DB search
MSSSRYAKLVEFAAHAGDVRCVRIGRKTAGVLVTGGDDKKVNVWALGKTTASFSLTGHQS
SVESVSFDNDEMVVAAGGSNGSIKVFELQTGKVTKSLSGHKSNVMCLAWHPYDSTIISGS
MDTNVKLWNLRDKEAVMTFKGHNAGVTHVRYSPDGNWVASASGDGAVKIWDVRQGRLLQD
LCPPTKYEITGVEFSPTEYLMATSSRDKLVRFWDLETFACIDQTTPEATPVRNICFYNDG
RTIFSAVQDGCRVWNVDPTQQQDYVDVPWYRVADLAISTIRGTQRLIGCSFNSTMVGLFY
IVLKNVRPFCEDPDFMAREPAASVDGNPYAAAGGSRSNLAGAAAAAQLPPESAVRRLSLN
DRAADPPRAGSAGNLGDAAAAAAAAAGYGNGRGAGVAAGVGPSVGVGRSQERSSSMGSRP
PQAPSSSAVAAGGDRLPPVALYGAPDRDRERDRSSNRYAGAAGASADFGGGPGDSVASDA
QLGRAASGHAAGARPGMVSIGVGVGDSLMRGQLQPDDLSRMAGGGGGGLARQRSQPREPT
IEVHAPAAPPASRSAGSGPGYRGAGSGPDRGVGVGVGVGVGEDRDMDQRYPWQGPGGAAA
GPSGMDRLGGGGGGAGGGGYASVVPSDLEAASALSSRHGMFLSAMKKRANTLMIMRNFVQ
KGDWRNAIAAARRGDDTAALADLLSAMHDRRDVFTLDLVGEVMTVVETVLSLPSDRQQQT
GLEVLALHIRAFGPVIRDLCGPGARGVGIDLSFEERRERAAKAKLVLQNMVPRLNSLARS
SETLGVRAGELAAQLAQL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctcgcgctacgcgaagctcgtggaattcgcggcgcacgctggagatgtgaga
tgcgtgcgcattggccggaagacagccggagtgcttgtgactggcggagatgacaagaaa
gtgaatgtttgggcgctcggaaagaccacagcaagcttttcgctgacgggacaccagtcg
tcggtggagagtgtctcgtttgacaatgacgagatggtggttgcggcgggtggctcaaat
ggcagcatcaaggtgttcgagctgcagacggggaaagtcaccaagagcctctcgggccac
aaaagcaatgtcatgtgcctggcctggcacccctacgactccaccatcatctctggatcc
atggacaccaacgtcaagctgtggaacctgcgcgacaaggaggcggtcatgaccttcaag
ggccacaacgccggcgtcacgcacgtgcggtactcgccggacggcaactgggtggcgtcg
gcctcgggcgacggcgctgtcaagatttgggacgtgcggcaggggcggctgttgcaggac
ctgtgcccacccaccaagtacgagatcacaggtgtggagttcagccccaccgagtacctc
atggccacctcctcgcgcgacaagctggtgcgcttctgggacctggagacctttgcctgc
atcgaccagaccacgcccgaggccacgcccgtgcgcaacatctgcttctacaacgacggc
cgcaccatcttcagcgccgtgcaggacggctgccgggtgtggaacgtggaccccacgcag
cagcaggactacgtggacgtgccctggtaccgcgtggcggacctggccatcagcaccatc
cgcggcacacagcggctcataggctgctcctttaactcgaccatggtgggcctgttctac
atcgtgctcaaaaacgtacggccgttttgcgaggacccggacttcatggcgcgggagccc
gccgcctccgtcgacggcaacccctacgcggcagccggcggcagccgcagcaatctcgct
ggcgccgcggcggcggcgcagcttccccccgagtcagctgtgcgccggctcagcctgaac
gaccgggcggcggacccaccgcgtgccggcagcgcggggaacttgggcgacgccgcggcg
gcggcagcagcggcggcgggttacggaaacggaagaggggcgggtgtggcggctggtgtg
gggccgtcggtgggcgtgggccggtcgcaggagcggtcctcgtcgatggggagtcggccg
ccgcaggcgccgtcctcgagcgcggtggcggcgggcggggaccggttgccgccggtggcg
ttgtatggcgcgcccgaccgggaccgggagcgcgaccgcagcagcaaccgctacgcgggc
gcggcgggcgccagtgccgactttggcggcgggccgggcgacagcgtggcgtcggacgca
cagctggggcgggcggcgtcggggcacgccgccggcgcgcggccgggcatggtgtcgatc
ggcgttggcgtgggcgacagcctcatgcgcgggcagctgcagccagacgacctgtcgcgc
atggctggcggaggcggaggcggcctggcgcggcagcggtcgcagccgcgggagcccacc
atcgaggtacacgcgccggccgccccgccagcgtcccggtctgcggggtcagggcccggc
taccgcggcgcggggtcagggccggaccgcggcgtgggcgtcggagtgggggttggtgtg
ggcgaggaccgggacatggaccagcgctacccctggcaggggccaggcggcgcagccgcc
ggcccctccggcatggaccggctaggcggcggaggcggaggcgcaggcggaggcggctac
gcgagtgtggtgccctcggacctggaggcggcgtctgcgctgtcgagccggcacggcatg
ttcctgtcggccatgaagaagcgcgccaacacgctcatgatcatgcgaaactttgtgcag
aagggcgactggcgcaacgccatcgccgcggcgcggcggggcgacgacacggcggccctg
gcggacctgctgtccgccatgcacgaccggcgggacgtgttcacgttggacctggtgggc
gaggtgatgacggtggtggagacggtgctgtcgctgccttcggaccggcagcagcagacg
gggctggaagtgctggcgctgcacatacgcgcctttgggcccgtcatccgggacctgtgc
ggcccgggcgcgcgcggcgtgggcatagacctcagctttgaggagcggcgcgagcgcgcc
gccaaggccaagctggtgcttcagaacatggtgccacgcctgaacagcctggcgcgctca
agcgagacgttgggcgtgcgcgcgggcgagctggcagcacagctggcgcagctctag
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