KEGG   Chlamydomonas reinhardtii: CHLRE_03g164101v5
Entry
CHLRE_03g164101v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03018  RNA degradation
cre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CHLRE_03g164101v5
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CHLRE_03g164101v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cre03019]
    CHLRE_03g164101v5
   03041 Spliceosome [BR:cre03041]
    CHLRE_03g164101v5
Messenger RNA biogenesis [BR:cre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CHLRE_03g164101v5
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CHLRE_03g164101v5
Spliceosome [BR:cre03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    CHLRE_03g164101v5
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 5729059
NCBI-ProteinID: XP_042925886
UniProt: A8IFM6
LinkDB
Position
3:complement(3034460..3036555)
AA seq 109 aa
MAGKAKESAVDLAKFIDKGVRVKLAGGREVQGILKGYDQLLNLVIDEAVEYLRDPEDPLT
VTDETRSLGLLVCRGTAVMLVAPSAGMEEIANPFLQAKDGEQAAEGDDE
NT seq 330 nt   +upstreamnt  +downstreamnt
atggcaggaaaggccaaggagtcggcggtcgacctcgccaagtttattgacaagggcgtt
cgcgtcaagcttgctggtggacgggaagtgcaagggatcttgaagggctacgaccagctg
ctgaacctggtgatcgatgaggctgtggagtacctccgagacccggaagacccgctcacg
gtgaccgatgagacccggtcactagggctgctggtgtgccgcggcactgcagtgatgctg
gttgcgccgtccgcgggcatggaggagattgccaaccccttcctccaggcgaaagacggc
gagcaggcggcagagggcgacgatgaatag

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