KEGG   Chlamydomonas reinhardtii: CHLRE_03g179550v5
Entry
CHLRE_03g179550v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03022  Basal transcription factors
cre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CHLRE_03g179550v5
  09124 Replication and repair
   03420 Nucleotide excision repair
    CHLRE_03g179550v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cre03021]
    CHLRE_03g179550v5
   03400 DNA repair and recombination proteins [BR:cre03400]
    CHLRE_03g179550v5
Transcription machinery [BR:cre03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CHLRE_03g179550v5
DNA repair and recombination proteins [BR:cre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CHLRE_03g179550v5
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 Zn_ribbon_GTF2H2 DZR
Other DBs
NCBI-GeneID: 5728801
NCBI-ProteinID: XP_042926148
UniProt: A0A2K3DXN0
LinkDB
Position
3
AA seq 432 aa
MAAAERRDDLGIEDGDDDDIDENELRRQEEAYQRQYENEQTWDQLQEDEHGNLFVDKTAE
QRARRQRLLSAAQSARIRKGMIRYVLLVVDLSRAASAQDLRPNRLGCMLSLCRSFVREFF
DQNPLSQLGIAVMRGGLVEKLTDLSGSPEAQVARLDAGKLGAPAGDASLQNALELGVSLL
KQLPPYGHRELLLLFAALASCDPGNVLDSVKACKDNNIRVSVVGVAAEVYVCRRITEDTG
GTYGVALNEGHLEQLLMAHSPPPPATAAQAKAELVRMGFPQRSTEEASSAVFVGQEARLL
PGSYTCPRCRSRVPELPVECHTCGLTLISSPHLARSYHHLFPVQPYHEDSEERAEAAAAV
QAQQPAMCSEVMTTTGAYCFGCLREVSEPGVKGQLHLTLRCGQCKQVFCFECDAYVHESL
HNCPGCEFLGAG
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggcagcagccgagcggagagacgacctcgggattgaagatggagacgacgacgacatt
gacgagaatgaactgcgacgacaagaggaggcataccagcggcaatatgaaaacgagcag
acatgggatcagctgcaggaggatgagcatggcaacctgttcgtggacaaaaccgcggag
cagcgcgcccggagacagcggttgctgtcggcggcgcaaagcgcccgcatccgcaagggc
atgatccgctatgtgctgctggtggtggacctgtcgcgcgccgcctccgcccaggacctg
cggcccaaccggctaggctgcatgctgtcgctgtgccgctccttcgtgcgcgagttcttc
gaccagaacccgctgagccagctgggcattgcggtgatgcgcggcgggctggtggagaag
ctgacggacctgagcggatcgccggaggcgcaggtggcgaggctggatgccggcaagctg
ggcgcacccgccggcgacgcctccctgcagaacgcgctggagctgggcgtgtcgctgctg
aagcagctgccgccgtacgggcaccgggagctgctgctgctcttcgcggcgctggccagc
tgcgacccgggcaatgtgctggacagcgtcaaggcgtgcaaggacaacaacatacgggtg
tcggtggtgggtgtggctgccgaggtgtacgtgtgccgacgcatcacggaggacacgggc
ggcacctacggcgtggcgctcaacgagggacacctggagcagctgctcatggcgcactcg
ccgccaccgccagccacagcagcacaggccaaggcggagctggtacgcatgggctttccg
cagcgcagcacggaggaggccagctcggcggtgttcgtggggcaggaggcgcggctgctg
ccgggcagctacacctgcccgcgctgccgcagccgcgtgcccgagctgcccgtggagtgc
cacacgtgcggcctgacgctcatctccagcccgcacctggcgcgctcctaccaccacctg
ttcccggtgcagccctaccacgaggacagcgaggagcgggcggaggctgcggcagcggtg
caggcgcagcaaccggccatgtgcagcgaggttatgacaaccacgggcgcgtactgcttc
ggctgcctacgcgaggtgtcggagccgggcgtcaaggggcagctgcacctcacgctgcgc
tgtggccagtgcaagcaggtgttttgcttcgaatgcgacgcgtacgtccacgaaagccta
cacaattgccccggctgcgagttcctgggggccggttga

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