Chlamydomonas reinhardtii: CHLRE_03g179550v5
Help
Entry
CHLRE_03g179550v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03022
Basal transcription factors
cre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHLRE_03g179550v5
09124 Replication and repair
03420 Nucleotide excision repair
CHLRE_03g179550v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cre03021
]
CHLRE_03g179550v5
03400 DNA repair and recombination proteins [BR:
cre03400
]
CHLRE_03g179550v5
Transcription machinery [BR:
cre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CHLRE_03g179550v5
DNA repair and recombination proteins [BR:
cre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CHLRE_03g179550v5
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Zn_ribbon_GTF2H2
DZR
Motif
Other DBs
NCBI-GeneID:
5728801
NCBI-ProteinID:
XP_042926148
UniProt:
A0A2K3DXN0
LinkDB
All DBs
Position
3
Genome browser
AA seq
432 aa
AA seq
DB search
MAAAERRDDLGIEDGDDDDIDENELRRQEEAYQRQYENEQTWDQLQEDEHGNLFVDKTAE
QRARRQRLLSAAQSARIRKGMIRYVLLVVDLSRAASAQDLRPNRLGCMLSLCRSFVREFF
DQNPLSQLGIAVMRGGLVEKLTDLSGSPEAQVARLDAGKLGAPAGDASLQNALELGVSLL
KQLPPYGHRELLLLFAALASCDPGNVLDSVKACKDNNIRVSVVGVAAEVYVCRRITEDTG
GTYGVALNEGHLEQLLMAHSPPPPATAAQAKAELVRMGFPQRSTEEASSAVFVGQEARLL
PGSYTCPRCRSRVPELPVECHTCGLTLISSPHLARSYHHLFPVQPYHEDSEERAEAAAAV
QAQQPAMCSEVMTTTGAYCFGCLREVSEPGVKGQLHLTLRCGQCKQVFCFECDAYVHESL
HNCPGCEFLGAG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagccgagcggagagacgacctcgggattgaagatggagacgacgacgacatt
gacgagaatgaactgcgacgacaagaggaggcataccagcggcaatatgaaaacgagcag
acatgggatcagctgcaggaggatgagcatggcaacctgttcgtggacaaaaccgcggag
cagcgcgcccggagacagcggttgctgtcggcggcgcaaagcgcccgcatccgcaagggc
atgatccgctatgtgctgctggtggtggacctgtcgcgcgccgcctccgcccaggacctg
cggcccaaccggctaggctgcatgctgtcgctgtgccgctccttcgtgcgcgagttcttc
gaccagaacccgctgagccagctgggcattgcggtgatgcgcggcgggctggtggagaag
ctgacggacctgagcggatcgccggaggcgcaggtggcgaggctggatgccggcaagctg
ggcgcacccgccggcgacgcctccctgcagaacgcgctggagctgggcgtgtcgctgctg
aagcagctgccgccgtacgggcaccgggagctgctgctgctcttcgcggcgctggccagc
tgcgacccgggcaatgtgctggacagcgtcaaggcgtgcaaggacaacaacatacgggtg
tcggtggtgggtgtggctgccgaggtgtacgtgtgccgacgcatcacggaggacacgggc
ggcacctacggcgtggcgctcaacgagggacacctggagcagctgctcatggcgcactcg
ccgccaccgccagccacagcagcacaggccaaggcggagctggtacgcatgggctttccg
cagcgcagcacggaggaggccagctcggcggtgttcgtggggcaggaggcgcggctgctg
ccgggcagctacacctgcccgcgctgccgcagccgcgtgcccgagctgcccgtggagtgc
cacacgtgcggcctgacgctcatctccagcccgcacctggcgcgctcctaccaccacctg
ttcccggtgcagccctaccacgaggacagcgaggagcgggcggaggctgcggcagcggtg
caggcgcagcaaccggccatgtgcagcgaggttatgacaaccacgggcgcgtactgcttc
ggctgcctacgcgaggtgtcggagccgggcgtcaaggggcagctgcacctcacgctgcgc
tgtggccagtgcaagcaggtgttttgcttcgaatgcgacgcgtacgtccacgaaagccta
cacaattgccccggctgcgagttcctgggggccggttga
DBGET
integrated database retrieval system