Chlamydomonas reinhardtii: CHLRE_03g180850v5
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Entry
CHLRE_03g180850v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K14006
protein transport protein SEC23
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CHLRE_03g180850v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cre04131
]
CHLRE_03g180850v5
Membrane trafficking [BR:
cre04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
CHLRE_03g180850v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
5728475
NCBI-ProteinID:
XP_001702936
UniProt:
A8JH39
LinkDB
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Position
3:complement(5047982..5052892)
Genome browser
AA seq
762 aa
AA seq
DB search
MDFAALEDIDGVRLTWNIWPNSKLEATKCVIPFASIYTPNKRLPTMPVLPYEPIPCKQCN
AILNPYARVDFYSKVWICPFCHSRNHFPAHYQGISDTNMPAELYPNYCTIEYTLPKTVAP
HPPAYVFLIDTCVSEDELSACKTAIMQAIQTLPEYAYVGLVTFGTHVHVYELGFTECSKC
FVFRGSKEYTSQQIVEQLGMRGGQQQRAGQPAGGPAGPAPGPQRRFLMPLGECEFTLTTA
LEELQKDSYPVVATHRPARCTGTAMQVAASLLGSSVPIGSCAARILLFVGGPCTEGSGKV
VNRELTEEIRSHKDLAKDGAPHFRKGKKFYDGLAQELVAHGHSLDIFACALDQIGMAEMK
DAVMLTGGLTVQTDTFHNVVFRDSLKRLFARDGEDGFLALSSNATFEVIPSRDIKVAGML
GQAARVDKKSPYVADVEVGLGGTTTWKLCSLDSETSVALLYEITATANREAGDAQSNQQF
FLQFITRYLHWTGELRCRVTTVTRRWIDGTQIGEVITGFDQEAAAVLMARLATHKMETEE
DFDATRWLDRALIRLAQRFGDYRKDDPQSFNLRPELSFYPQFMFNLRRSQFVQVFGNSPD
ETAYYRMALFRVAVPDAMVMIQPQLTAYHFNGPPEPVLLDVSSILPERVLLLDAYFYVVV
FHGTTIAQWRKAEYHLQPEHVAFAQVLAAPQAEAKEIVRRRFPVPKIVDCDHNGSQARFL
LVKLNPSSTYTSATPMSAEVINTDDVSLATFTEHLKRLAVQS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgcggcgcttgaggacattgatggagttcggctcacctggaacatctggccg
aactccaagctggaggcgacgaaatgcgttattccgttcgcgtccatctacacgcccaac
aagcggctgcccacgatgccggtgctgccgtacgagcccattccctgcaagcagtgcaac
gccatcctcaacccctacgcgcgcgtggacttctacagcaaggtgtggatctgccccttc
tgtcacagccgcaaccacttcccggcgcattaccagggcatctccgacaccaacatgccc
gcggagctgtaccccaattactgcaccatcgagtacacgctgcccaagaccgtggcgccg
cacccgcccgcgtacgtgttcctcatcgacacttgcgtcagcgaggatgagctgagcgcc
tgcaagacggctatcatgcaggccatccagacgctgccggagtacgcgtacgtgggcctg
gtgacgttcggcacgcacgtgcacgtgtacgagctgggcttcacggagtgcagcaagtgc
ttcgtgttccgcggctccaaggagtacaccagccagcagatcgtggagcagctgggcatg
cgtgggggccagcagcagcgggccgggcagccggccggcgggccggcggggccggcaccg
gggccgcagcgtcgcttcctcatgccgctcggcgagtgcgagttcacgctgaccaccgcc
ctggaagagctgcagaaggactcgtacccggtggtggccacacaccgcccagcgcgctgc
acgggcacagccatgcaggtggcggcctcgctgctgggctcctcggtgcccatcggcagc
tgcgcagcgcgcatcctcctgttcgtgggcgggccctgcacggagggcagcggcaaggtg
gttaaccgggagctgacggaggagatccgctcacacaaggacctggcgaaggacggtgcg
ccgcacttccgcaagggcaagaagttctacgacgggctggcgcaggagctggtggcgcac
ggtcactcgctggacatcttcgcctgtgcgctggaccagatcggcatggcggaaatgaag
gacgctgtaatgctgacaggcggcctgacggtgcagaccgacaccttccacaacgtggtg
ttccgcgactcgctgaagcgcctgtttgcgcgcgacggcgaggacggcttcctggccctg
tcctccaacgccacctttgaggtcatcccctcgcgggacatcaaggtggcgggaatgctg
ggccaggcggcgcgtgtcgacaagaagagcccgtacgtagcggacgtggaggtggggctg
ggcggcaccaccacctggaagctgtgcagcctggattcggagaccagcgtggcgctgctg
tacgagatcaccgccaccgccaaccgggaagcgggcgacgcccagtccaaccagcagttc
ttcctccagttcatcacgcggtacctgcattggaccggcgagctgcggtgccgtgtgacc
actgtcacgcggcgctggatcgacgggacgcaaatcggcgaggttatcaccggcttcgac
caggaggcggcggcggtgctgatggcgcggctggccacgcacaagatggagacggaggag
gactttgacgccacgcgctggctggaccgcgcgctcattcggctggcgcagcgctttggc
gactaccgcaaggatgacccgcagtccttcaacctgcgtcccgagctcagcttctacccg
cagttcatgttcaacctgcggcgaagccagttcgtgcaggtgttcggcaacagccccgac
gagaccgcctactaccgcatggcgctgttccgcgtggcagtgccggacgccatggttatg
atccagccccagctgacggcgtaccatttcaacgggccaccggagccggtgctgctggac
gtgtcgtccatcctgccggagcgggtgctgctgctggacgcctacttctacgtggtggtg
ttccacggcaccaccatagcgcagtggcgcaaggccgagtaccacctgcagcccgagcac
gtcgcgttcgcgcaggtgttggcggcgccccaggcggaggccaaggagattgtgcggcgg
cgattccccgtgccgaagattgtggactgcgaccacaacggttcgcaggcccgcttcctg
ctagtgaagctcaacccctcgtccacctacacgtccgccacgcccatgtcggccgaggtc
atcaacaccgacgacgtcagcctggccactttcacggagcacctcaagcggctggcggtg
cagtcttag
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