Chlamydomonas reinhardtii: CHLRE_03g188750v5
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Entry
CHLRE_03g188750v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cre03041
]
CHLRE_03g188750v5
03016 Transfer RNA biogenesis [BR:
cre03016
]
CHLRE_03g188750v5
Enzymes [BR:
cre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CHLRE_03g188750v5
Spliceosome [BR:
cre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CHLRE_03g188750v5
Transfer RNA biogenesis [BR:
cre03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CHLRE_03g188750v5
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
YjzJ
Motif
Other DBs
NCBI-GeneID:
5717490
NCBI-ProteinID:
XP_042926281
UniProt:
A0A2K3DY65
LinkDB
All DBs
Position
3
Genome browser
AA seq
775 aa
AA seq
DB search
MSAFEELGVMPELAKAVEDLGWMLPSPVQAEAIPLILGGGDVMAAAETGSGKTGAFAIPM
LQIVHETLRQRARSGSAASTSGRGAAGAAAAAASPAAVPCVLSSEDRELHVAVSPDGLSA
QSRSEKAWGGVRGSVGVFASCGGKVYYEVTVTDEGLCRVGWSCPTAALELGTDRLGWGFG
GTGKKSHNRQFDSYGEPFALNDVVGCLLDCGEAGGSVAFTKNGRPLGEAFKLPDNLRNQV
LHPAITLKNAEVALNFGATPLAFPPPPGYIPLAQAPAAWVAAGGGAAAASAGGGGNGRGE
KDLGRKPVCLILEPAKDLAEQTANCFNDYGKHLKAPEVKTGLFVGGMDAAPQIRMLREGV
DVVVGTPGRVIDFVESGKIPLDQIRFFVLDEADRLIADNPDVITKLYGRLPKQGTGIHRL
QVLLFSATLHSPEVKDMAGRICINPILVDLKGRDAVPETVDHVLVRVDPREDRSWLQSNP
EVFTDSCHALDRVGPNAAASPECLSEGVKRLKQRLLQRIIDTMKMEQCLIFCRTNHDCDQ
LERFLNTLGGAGGGAGGRGFRGKRESGKENPYSCCVLAGARSMDERRAALSAFKDGDVRF
LIATDVAARGIDIRELPYVINMTLPDKSEDYIHRIGRVGRADTMGLAISLVAEVPEKVWF
CTVKGMKPWLAPDSSNTRTTDKGGHTIWYNERELLGAIEGRLGRPIPPMSDDLTLPPELA
ERLSAAGDKYGQQRGGGVSKEVTEHLAAIASNVAQLAGLEWQVQTSYLSLKRKWG
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcatttgaggagctgggcgtcatgccggagctggcaaaggcggtagaggacctg
gggtggatgctgccctcgccggttcaggccgaggccattcccctcatcctgggcggcggc
gacgtcatggcggcggcggagaccggcagcggcaagacaggcgccttcgccattcccatg
ctccaaatcgtgcacgagactctgcgccagcgtgcgcgcagcggctccgccgccagcacc
agcggccgcggcgcagccggggccgcagccgcagccgccagccccgcagccgtgccgtgt
gtgctgagtagcgaggaccgggagctgcacgtggcggtgtcgccggacgggctgtcggca
cagagccgctcggagaaggcgtggggcggcgtgcgcggcagcgtgggtgtgttcgccagc
tgcggcggcaaggtgtactatgaggtgacggtgactgacgaggggttgtgtcgagtgggc
tggagctgccccaccgctgcgttggagctggggacagacaggctgggctggggctttggc
ggcaccggcaagaagagccacaaccgccagttcgacagctacggcgagccgttcgccctg
aacgacgtggtgggctgcctgctggactgcggcgaggccggcggcagtgtggccttcacc
aagaacggccggccgctgggcgaggcgttcaagctgccagacaacctgcgcaaccaggtt
ctgcaccccgccataacgctcaagaacgccgaggtcgcgctcaactttggcgccacgccg
cttgccttcccgccgccgcccggctacatcccgctcgctcaggcgccagccgcctgggtg
gcggcgggtggcggcgcagccgccgccagcgcaggtggcggcggaaacggccgcggtgag
aaggaccttgggcgcaagcctgtgtgccttatcttggagcctgccaaggacttggcggag
cagacagccaactgcttcaacgactacggcaaacacctgaaggcgccggaagtgaagacg
gggctgttcgtgggcggcatggatgcagcgccgcagattcggatgctgcgtgagggagtg
gatgttgtggtgggcacacccggccgcgtgatcgacttcgtggagagcggcaagatccct
ctagaccagatccgctttttcgtgctggacgaggcggaccggctcatcgcggacaacccg
gacgtgatcaccaagctctacggccgcctgcccaagcagggcaccggcattcacaggctg
caggtgctcctgttcagcgccacgctgcactcgcccgaggtgaaggacatggctggccgc
atctgcatcaaccccatcctggtcgacctcaagggccgcgacgcagtgccggagaccgtc
gaccatgtgctggtgcgggtggatccgcgcgaggacaggagctggctgcagagcaatccc
gaggtgttcacggacagctgccacgcactggaccgggtgggccccaacgccgcggccagc
cccgagtgcctgagcgagggcgtcaagcgcctcaagcagcgcctgctgcagcgcatcata
gacaccatgaagatggagcagtgcctgatcttctgccgcaccaaccacgactgcgaccag
ctcgagcgcttcctcaacacgctgggcggggcaggcggcggggcaggcggccgcggcttc
cgtggcaagcgcgagagcggcaaggagaacccctacagctgctgcgtgctggcgggcgca
cgcagcatggacgagcggcgcgccgcgctgtccgcgttcaaggacggggacgtgcgcttc
ctcatcgccactgacgtggccgcgcgcggcattgacatccgcgagctgccctacgtcatc
aacatgaccctgcccgacaaaagcgaggactacatacacaggattgggcgcgtgggccgc
gccgacaccatgggtctggccatcagcctggtggccgaggtgccggagaaggtgtggttc
tgcaccgtcaagggcatgaaaccctggctggcgcccgacagcagcaacacgcgcaccacg
gacaagggcgggcacacaatctggtacaacgagcgcgagttgctgggcgccattgagggg
cggctgggccggcccatcccgcccatgtcggacgacctcacgctgccgccggagctggcg
gagcggctcagcgcggcgggggacaagtacggccagcagcgcggtggcggagtcagcaag
gaggtgacggagcacctggcggcgatagcgtccaacgtggcgcagctggctgggctggag
tggcaggtgcaaaccagctacctcagcctcaaacggaaatggggctag
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