Chlamydomonas reinhardtii: CHLRE_03g194800v5
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Entry
CHLRE_03g194800v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CHLRE_03g194800v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_03g194800v5
Enzymes [BR:
cre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
CHLRE_03g194800v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CHLRE_03g194800v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
nSTAND3
AAA_22
AAA_16
ATP_bind_1
CbiA
ABC_tran
MMR_HSR1
AAA_29
Motif
Other DBs
NCBI-GeneID:
5718729
NCBI-ProteinID:
XP_001693272
UniProt:
A0A2K3DYJ8
LinkDB
All DBs
Position
3:complement(6458902..6463224)
Genome browser
AA seq
431 aa
AA seq
DB search
MAADGGSTSTTHTLSANQELRLECPSGKAVSIKLEEGAAEVFGTELQRGKSVPVSGQKLA
VFTWQGCKVTVEGEPSVQYVADETPMAQYLNTHRTLAARRDEARRAGASSPGSPAGRGPV
VVVVGPTDSGKSTLCRLLCNWAVRDGYAPTFVDLDVGQGTITVPGCLSAVPVEQPIDLVE
GINNIPIVFFYGHSSPGENPTLFKLLVDKLAGVLARRAAADPSVAAAGCVINTFGWVDGL
GYELQKYLIQAFQCDVVLAMEQDRLHATLQQDLKAAMPRTSILKLAKSGGAVKREGEERR
GAREARVRDYFYGAPGAPLQPATMTVKATDLAVYRIGSGPRAPNTALPIGAVSLADPLRL
QALPPSLEMLQAVMAVSHAPTPDQILNMNVAGFVLIKDVDTARGTVTLVAPAAGQLPGRY
LITGTLRSSID
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagatggcggctcaacgagcacgacacatacacttagcgcgaaccaggagctt
cgactagagtgccccagtggcaaagcagtgtccatcaagctggaggagggcgcggccgag
gtgttcgggacggagctgcagcgcggcaagtcagtgcccgtcagcggacagaagctagcg
gtcttcacgtggcagggttgcaaggtgacggtggagggcgagcccagcgtccagtatgtg
gcggacgagacgcccatggctcagtacctcaacacgcaccgcacgctggcggcgcggcgg
gatgaggcgcggcgcgccggcgccagctcgccgggcagccccgcgggccgggggccggtt
gtggtggtggtagggccaacggacagtggcaagagcacgctgtgccggctgctgtgcaac
tgggcggtgcgggacgggtacgcgcccacgtttgtggacctggatgtgggccagggcacc
atcacagtgcctggctgtctgtcagcggtgcctgtggagcagcccatcgacctggtggag
ggaatcaacaacatacccattgtgttcttctacggacactcctcgcccggggagaacccc
acgctgttcaagctgctggtggacaagttggcgggcgtgctggcgcggcgggcggcggcg
gacccgagtgtggcggcggcgggctgcgtgatcaacacgttcggctgggtggatgggctg
ggctatgagctgcagaagtacctcatacaggcgttccagtgcgatgtggtgctggcgatg
gagcaggaccgcctacacgccacgttgcagcaggacctcaaggccgccatgccgcgcacc
tccatcctcaagctagctaagagcggcggtgccgtgaagcgcgagggcgaggagcgccgc
ggcgcgcgcgaggcgcgtgtgcgcgactacttctacggcgcgcccggcgccccgctgcag
cccgccaccatgaccgtcaaggccacagacctggccgtgtaccggataggcagcgggccg
cgcgcgcccaacaccgcgcttcccatcggcgccgtgagcctggccgatccgctgcggctg
caggcgctgccgcccagcctggagatgcttcaagcggtgatggccgtgtcacacgcaccc
acccccgaccagatcctgaacatgaatgtggcgggctttgtcctgatcaaggacgtggac
acggcgcgaggcaccgtgacgctcgtagcgccggcggcggggcagctgcccgggcgctac
ctcatcaccggcaccctgcgctcatccattgattaa
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