KEGG   Chlamydomonas reinhardtii: CHLRE_03g194800v5
Entry
CHLRE_03g194800v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CHLRE_03g194800v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cre03019]
    CHLRE_03g194800v5
Enzymes [BR:cre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     CHLRE_03g194800v5
Messenger RNA biogenesis [BR:cre03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     CHLRE_03g194800v5
SSDB
Motif
Pfam: CLP1_P CLP1_N Clp1 nSTAND3 AAA_22 AAA_16 ATP_bind_1 CbiA ABC_tran MMR_HSR1 AAA_29
Other DBs
NCBI-GeneID: 5718729
NCBI-ProteinID: XP_001693272
UniProt: A0A2K3DYJ8
LinkDB
Position
3:complement(6458902..6463224)
AA seq 431 aa
MAADGGSTSTTHTLSANQELRLECPSGKAVSIKLEEGAAEVFGTELQRGKSVPVSGQKLA
VFTWQGCKVTVEGEPSVQYVADETPMAQYLNTHRTLAARRDEARRAGASSPGSPAGRGPV
VVVVGPTDSGKSTLCRLLCNWAVRDGYAPTFVDLDVGQGTITVPGCLSAVPVEQPIDLVE
GINNIPIVFFYGHSSPGENPTLFKLLVDKLAGVLARRAAADPSVAAAGCVINTFGWVDGL
GYELQKYLIQAFQCDVVLAMEQDRLHATLQQDLKAAMPRTSILKLAKSGGAVKREGEERR
GAREARVRDYFYGAPGAPLQPATMTVKATDLAVYRIGSGPRAPNTALPIGAVSLADPLRL
QALPPSLEMLQAVMAVSHAPTPDQILNMNVAGFVLIKDVDTARGTVTLVAPAAGQLPGRY
LITGTLRSSID
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggcagcagatggcggctcaacgagcacgacacatacacttagcgcgaaccaggagctt
cgactagagtgccccagtggcaaagcagtgtccatcaagctggaggagggcgcggccgag
gtgttcgggacggagctgcagcgcggcaagtcagtgcccgtcagcggacagaagctagcg
gtcttcacgtggcagggttgcaaggtgacggtggagggcgagcccagcgtccagtatgtg
gcggacgagacgcccatggctcagtacctcaacacgcaccgcacgctggcggcgcggcgg
gatgaggcgcggcgcgccggcgccagctcgccgggcagccccgcgggccgggggccggtt
gtggtggtggtagggccaacggacagtggcaagagcacgctgtgccggctgctgtgcaac
tgggcggtgcgggacgggtacgcgcccacgtttgtggacctggatgtgggccagggcacc
atcacagtgcctggctgtctgtcagcggtgcctgtggagcagcccatcgacctggtggag
ggaatcaacaacatacccattgtgttcttctacggacactcctcgcccggggagaacccc
acgctgttcaagctgctggtggacaagttggcgggcgtgctggcgcggcgggcggcggcg
gacccgagtgtggcggcggcgggctgcgtgatcaacacgttcggctgggtggatgggctg
ggctatgagctgcagaagtacctcatacaggcgttccagtgcgatgtggtgctggcgatg
gagcaggaccgcctacacgccacgttgcagcaggacctcaaggccgccatgccgcgcacc
tccatcctcaagctagctaagagcggcggtgccgtgaagcgcgagggcgaggagcgccgc
ggcgcgcgcgaggcgcgtgtgcgcgactacttctacggcgcgcccggcgccccgctgcag
cccgccaccatgaccgtcaaggccacagacctggccgtgtaccggataggcagcgggccg
cgcgcgcccaacaccgcgcttcccatcggcgccgtgagcctggccgatccgctgcggctg
caggcgctgccgcccagcctggagatgcttcaagcggtgatggccgtgtcacacgcaccc
acccccgaccagatcctgaacatgaatgtggcgggctttgtcctgatcaaggacgtggac
acggcgcgaggcaccgtgacgctcgtagcgccggcggcggggcagctgcccgggcgctac
ctcatcaccggcaccctgcgctcatccattgattaa

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