Chlamydomonas reinhardtii: CHLRE_03g199311v5
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Entry
CHLRE_03g199311v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
CHLRE_03g199311v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cre04131
]
CHLRE_03g199311v5
Membrane trafficking [BR:
cre04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
CHLRE_03g199311v5
Hops complex
CHLRE_03g199311v5
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
5725018
NCBI-ProteinID:
XP_042926613
UniProt:
A0A2K3DZI9
LinkDB
All DBs
Position
3:8422937..8431598
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AA seq
1017 aa
AA seq
DB search
MTDSVAQLKTQAVGDWEVVGDCFFARETLYESIWDGFEVEDKRFTCATYGGPIAAMRDER
RMVLVTPGSSATAAAGGLKPVLRTFTAAGGPLGASVWDGGRLVDWGWTDEQQLAAVEANG
KVTVYSPYAEKVREFRFGAAVERDTVAAAIVYGTGVLVVTEAQLQPAPPGSSTPTATVSE
PGSIWLVEDLREPRPTRLTSPPLTAFTPTATEDNRGDLGGSGLLSLGGLGRLGLPSCVAV
LDPRHTLSTRVEVLAVVGGVLWQLDEVSATDHHPAALRSAGGADHISVSPDGAFVAMYTQ
DHRLVVLASDLTKQLTEFEMRGAECAPQALHWVGADAVLLVWPETAVLVGPYGDSVQWSM
SDDVLAVVPEVDGCRLLFGGRGRHELLRKVPEACTQVFRPGATGPAAQLWDARALYDDQN
PRCDRILRNIQDGGPTALAAAVATTITAASHDLSPLRQRSLMRAAAYGRPFCPPEFPRQL
MYGTACRLRVLNAVRDARVGLPLTMSQLEALSLPVLVARLMSYRQWLLAYRIAGVLRNIP
GAQQPPLRQGTGANTALGPRPPPMGQDQVLMQWACAKISAASGSSSQVDDAHLKDAIVAK
LKGCPNVRYAPLAAHALSVGRRRLALRLLDEERSPAQQVPLLLSLAVGSAGARAGAGGSS
GRQGLDARVGDEDGDSSDEVLQRALRKAIESGDTDLVYLVLFGLYRARPLPEFWSLVAVR
ALARNLFIKYCRAKEPELLETILTSAAATSSSAAGAGGAQTSAASAAAAASFPPTAAAAE
LASLHFRAALKEEVQLCEQAAAGAGGGMPPAQADAAATHLASELADVAHKYGQSRDSAFQ
SKAVSEMAALRREQARLERETGQRLFYGLSLVETVRTAIRLGHHRAAAALKKQFVLSDRR
FTWVKVRTLAETRDWESLEGFATELRRSPIGWEPFIEAAKKWQAPSEYRARLVARLPDSP
AKAEELSALGLAREAAEVAARIKDTDLFARIQSAVAAGSPAALAIAQIKERFQFRTG
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactcagtggcacaactaaagacacaagcagtcggagactgggaggtggtaggc
gattgcttcttcgcgcgagagaccctctatgagagcatctgggatgggttcgaggtggag
gacaagaggtttacatgcgcaacgtacgggggccctattgctgcgatgcgtgacgagagg
cgcatggtgctggtaacaccgggttcatcggcaacagcagcagccgggggcctcaagcct
gtcctaagaacgttcacagccgccggaggacctctgggggcgtcggtgtgggacggaggc
cgcttggtggactggggctggacggatgagcagcagctggccgcagtggaggccaacggc
aaggtcaccgtgtactccccctatgctgaaaaagtccgtgagttccgatttggagctgcg
gttgagcgcgacacagtggctgccgcaattgtgtacggcactggggtgctggtagtcact
gaagcgcagctgcagccagcaccgccaggttccagcactcccactgcgaccgtgtctgag
cccggaagcatctggttggttgaggacttgcgggaaccccgcccaacacggctcacctcg
cccccgctcacggcattcacccccacggccactgaggacaaccgtggcgaccttggtggc
agtgggctgctgagtctgggcggccttgggcgactgggcctgccctcatgcgtggcagtg
ttggaccctcggcacaccctatcgacacgcgtggaggtcctggctgtggtaggcggcgta
ctgtggcagctggatgaggtgtcggccaccgaccaccaccccgctgcactgcggtcggcg
ggtggggcggatcacatctctgtgtcgccggatggggcctttgtggccatgtacacgcag
gaccaccggctggtggtgctggcgtcagacctgaccaagcagctaactgagtttgagatg
cgcggtgctgagtgtgcaccacaagccctacattgggtgggcgcagatgccgtgctgctg
gtgtggcctgaaacagcggtgctagtgggcccctacggcgacagcgtgcagtggagcatg
agcgatgatgtgctcgcggtagtacctgaggtggatggctgccggctgctgttcggcgga
cgcggccgtcacgagctgctcaggaaggtgccggaggcctgtacacaggtgttccgacca
ggcgccactgggccagcggcgcagctgtgggatgcaagggcgctgtacgatgaccaaaac
ccgcgctgtgaccgcatcctgcggaatatccaggatggcgggcccacagctctggccgcc
gccgtggctacaaccatcacggccgccagccacgacctgtcgcctttgcggcagcggtcg
ctgatgcgggctgccgcttacggccggcccttttgcccgcccgaattcccacgccagctg
atgtacggcaccgcttgccggctgcgggtgctgaacgcggtccgggacgcccgcgtgggc
ctgccgctcaccatgagccagctggaggcgctcagtctgcccgtgctggtggccaggctc
atgtcataccggcaatggctgctggcctaccggatagcaggcgtgctccggaatatcccg
ggcgcccagcagccgccactgaggcaagggactggcgcaaacactgcactgggcccccga
cctccgcctatgggccaagaccaggtgctgatgcagtgggcgtgcgccaaaatctctgca
gcgtccggcagcagcagccaagtggacgacgcgcacctcaaggacgcgattgtggccaaa
ctgaaaggctgccctaacgtgcggtatgctccgctcgcagcacacgccctatctgtggga
agacgccgcctggcactgcggctgctggatgaggagcggtcacctgcacagcaggttccc
ctgttgctcagcttggcggtgggaagtgccggggcgcgggcgggagctggcggctcctcg
ggaaggcaaggtctggatgcaagggtgggtgacgaggacggcgacagcagtgacgaggtg
ctgcagcgggcgttgcggaaggccattgagagtggcgacaccgacctggtctacttggtg
ctgttcggactgtaccgagcccggccgctgcctgagttctggtccctggtggcggtgcgg
gcgctagcgcggaatctgttcatcaagtactgcagggccaaggagccggagctgctcgaa
accattttgacgtcagcagccgccaccagtagctcagcagccggagcaggaggggcacag
acgtctgcggcaagtgctgcagcggcagccagcttccctcctacggctgctgccgcagag
ctggccagtctgcacttccgcgccgcgctgaaggaggaggtccagctgtgcgagcaggcc
gcggcaggagctggcggcggaatgcctccggctcaggccgatgccgcggcaactcacctt
gcgagtgagcttgctgacgtggcgcacaagtatggccagagccgtgactccgccttccag
tccaaggccgtgtcggagatggcggcactgcggcgtgagcaggcgcggctggagcgggag
accggtcagcgccttttctacgggctgagcctggtcgagactgtgcggacggcaatacgg
ctcggacaccatcgcgccgcggcagcgttgaagaagcaatttgtgctcagcgaccggcgc
tttacctgggtcaaggtgcgcacgctggcggagacccgtgactgggagtcactggagggt
tttgccacagagcttcggcgcagccccatcggatgggaacctttcattgaggccgctaag
aaatggcaagcgccgtcggagtaccgcgccaggctggtggcccggctgccggacagcccc
gccaaggctgaggagctctcagcgctgggcctggcgcgcgaggccgcagaagtggctgcc
cgcatcaaggacacggacctgtttgcgcgcattcagtcggcagtggcggccggtagccct
gcggcactggccatcgcacagatcaaggagcgcttccagttccggacagggtga
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