KEGG   Chlamydomonas reinhardtii: CHLRE_03g199311v5
Entry
CHLRE_03g199311v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K20180  vacuolar protein sorting-associated protein 16
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    CHLRE_03g199311v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cre04131]
    CHLRE_03g199311v5
Membrane trafficking [BR:cre04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    CHLRE_03g199311v5
   Hops complex
    CHLRE_03g199311v5
SSDB
Motif
Pfam: Vps16_N Vps16_C
Other DBs
NCBI-GeneID: 5725018
NCBI-ProteinID: XP_042926613
UniProt: A0A2K3DZI9
LinkDB
Position
3:8422937..8431598
AA seq 1017 aa
MTDSVAQLKTQAVGDWEVVGDCFFARETLYESIWDGFEVEDKRFTCATYGGPIAAMRDER
RMVLVTPGSSATAAAGGLKPVLRTFTAAGGPLGASVWDGGRLVDWGWTDEQQLAAVEANG
KVTVYSPYAEKVREFRFGAAVERDTVAAAIVYGTGVLVVTEAQLQPAPPGSSTPTATVSE
PGSIWLVEDLREPRPTRLTSPPLTAFTPTATEDNRGDLGGSGLLSLGGLGRLGLPSCVAV
LDPRHTLSTRVEVLAVVGGVLWQLDEVSATDHHPAALRSAGGADHISVSPDGAFVAMYTQ
DHRLVVLASDLTKQLTEFEMRGAECAPQALHWVGADAVLLVWPETAVLVGPYGDSVQWSM
SDDVLAVVPEVDGCRLLFGGRGRHELLRKVPEACTQVFRPGATGPAAQLWDARALYDDQN
PRCDRILRNIQDGGPTALAAAVATTITAASHDLSPLRQRSLMRAAAYGRPFCPPEFPRQL
MYGTACRLRVLNAVRDARVGLPLTMSQLEALSLPVLVARLMSYRQWLLAYRIAGVLRNIP
GAQQPPLRQGTGANTALGPRPPPMGQDQVLMQWACAKISAASGSSSQVDDAHLKDAIVAK
LKGCPNVRYAPLAAHALSVGRRRLALRLLDEERSPAQQVPLLLSLAVGSAGARAGAGGSS
GRQGLDARVGDEDGDSSDEVLQRALRKAIESGDTDLVYLVLFGLYRARPLPEFWSLVAVR
ALARNLFIKYCRAKEPELLETILTSAAATSSSAAGAGGAQTSAASAAAAASFPPTAAAAE
LASLHFRAALKEEVQLCEQAAAGAGGGMPPAQADAAATHLASELADVAHKYGQSRDSAFQ
SKAVSEMAALRREQARLERETGQRLFYGLSLVETVRTAIRLGHHRAAAALKKQFVLSDRR
FTWVKVRTLAETRDWESLEGFATELRRSPIGWEPFIEAAKKWQAPSEYRARLVARLPDSP
AKAEELSALGLAREAAEVAARIKDTDLFARIQSAVAAGSPAALAIAQIKERFQFRTG
NT seq 3054 nt   +upstreamnt  +downstreamnt
atgaccgactcagtggcacaactaaagacacaagcagtcggagactgggaggtggtaggc
gattgcttcttcgcgcgagagaccctctatgagagcatctgggatgggttcgaggtggag
gacaagaggtttacatgcgcaacgtacgggggccctattgctgcgatgcgtgacgagagg
cgcatggtgctggtaacaccgggttcatcggcaacagcagcagccgggggcctcaagcct
gtcctaagaacgttcacagccgccggaggacctctgggggcgtcggtgtgggacggaggc
cgcttggtggactggggctggacggatgagcagcagctggccgcagtggaggccaacggc
aaggtcaccgtgtactccccctatgctgaaaaagtccgtgagttccgatttggagctgcg
gttgagcgcgacacagtggctgccgcaattgtgtacggcactggggtgctggtagtcact
gaagcgcagctgcagccagcaccgccaggttccagcactcccactgcgaccgtgtctgag
cccggaagcatctggttggttgaggacttgcgggaaccccgcccaacacggctcacctcg
cccccgctcacggcattcacccccacggccactgaggacaaccgtggcgaccttggtggc
agtgggctgctgagtctgggcggccttgggcgactgggcctgccctcatgcgtggcagtg
ttggaccctcggcacaccctatcgacacgcgtggaggtcctggctgtggtaggcggcgta
ctgtggcagctggatgaggtgtcggccaccgaccaccaccccgctgcactgcggtcggcg
ggtggggcggatcacatctctgtgtcgccggatggggcctttgtggccatgtacacgcag
gaccaccggctggtggtgctggcgtcagacctgaccaagcagctaactgagtttgagatg
cgcggtgctgagtgtgcaccacaagccctacattgggtgggcgcagatgccgtgctgctg
gtgtggcctgaaacagcggtgctagtgggcccctacggcgacagcgtgcagtggagcatg
agcgatgatgtgctcgcggtagtacctgaggtggatggctgccggctgctgttcggcgga
cgcggccgtcacgagctgctcaggaaggtgccggaggcctgtacacaggtgttccgacca
ggcgccactgggccagcggcgcagctgtgggatgcaagggcgctgtacgatgaccaaaac
ccgcgctgtgaccgcatcctgcggaatatccaggatggcgggcccacagctctggccgcc
gccgtggctacaaccatcacggccgccagccacgacctgtcgcctttgcggcagcggtcg
ctgatgcgggctgccgcttacggccggcccttttgcccgcccgaattcccacgccagctg
atgtacggcaccgcttgccggctgcgggtgctgaacgcggtccgggacgcccgcgtgggc
ctgccgctcaccatgagccagctggaggcgctcagtctgcccgtgctggtggccaggctc
atgtcataccggcaatggctgctggcctaccggatagcaggcgtgctccggaatatcccg
ggcgcccagcagccgccactgaggcaagggactggcgcaaacactgcactgggcccccga
cctccgcctatgggccaagaccaggtgctgatgcagtgggcgtgcgccaaaatctctgca
gcgtccggcagcagcagccaagtggacgacgcgcacctcaaggacgcgattgtggccaaa
ctgaaaggctgccctaacgtgcggtatgctccgctcgcagcacacgccctatctgtggga
agacgccgcctggcactgcggctgctggatgaggagcggtcacctgcacagcaggttccc
ctgttgctcagcttggcggtgggaagtgccggggcgcgggcgggagctggcggctcctcg
ggaaggcaaggtctggatgcaagggtgggtgacgaggacggcgacagcagtgacgaggtg
ctgcagcgggcgttgcggaaggccattgagagtggcgacaccgacctggtctacttggtg
ctgttcggactgtaccgagcccggccgctgcctgagttctggtccctggtggcggtgcgg
gcgctagcgcggaatctgttcatcaagtactgcagggccaaggagccggagctgctcgaa
accattttgacgtcagcagccgccaccagtagctcagcagccggagcaggaggggcacag
acgtctgcggcaagtgctgcagcggcagccagcttccctcctacggctgctgccgcagag
ctggccagtctgcacttccgcgccgcgctgaaggaggaggtccagctgtgcgagcaggcc
gcggcaggagctggcggcggaatgcctccggctcaggccgatgccgcggcaactcacctt
gcgagtgagcttgctgacgtggcgcacaagtatggccagagccgtgactccgccttccag
tccaaggccgtgtcggagatggcggcactgcggcgtgagcaggcgcggctggagcgggag
accggtcagcgccttttctacgggctgagcctggtcgagactgtgcggacggcaatacgg
ctcggacaccatcgcgccgcggcagcgttgaagaagcaatttgtgctcagcgaccggcgc
tttacctgggtcaaggtgcgcacgctggcggagacccgtgactgggagtcactggagggt
tttgccacagagcttcggcgcagccccatcggatgggaacctttcattgaggccgctaag
aaatggcaagcgccgtcggagtaccgcgccaggctggtggcccggctgccggacagcccc
gccaaggctgaggagctctcagcgctgggcctggcgcgcgaggccgcagaagtggctgcc
cgcatcaaggacacggacctgtttgcgcgcattcagtcggcagtggcggccggtagccct
gcggcactggccatcgcacagatcaaggagcgcttccagttccggacagggtga

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