Chlamydomonas reinhardtii: CHLRE_03g205697v5
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Entry
CHLRE_03g205697v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K19613
leucine-rich repeat protein SHOC2
Organism
cre
Chlamydomonas reinhardtii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_14
LRR_LRWD1
LRR_9
LRR_EndoS
LRR_13
Motif
Other DBs
NCBI-GeneID:
5724941
NCBI-ProteinID:
XP_042926667
UniProt:
A0A2K3DZT4
LinkDB
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Position
3:8778953..8790098
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AA seq
1152 aa
AA seq
DB search
MEGEINKEGMGLPTVPADELQAQPDCKALRLAKNAISVFPGGVLPLVAKLQLLDLTGNKL
SGVPGDLTRCSGLRTLLLSHNSLAGVPDAVFGLVRLRRLELARCGLADVDGAWFQLTALK
HLDLSHNDLRTLPPDIGWLPLEPERGEGAAAAAAAEEEEGPAAGPWSGPGLRLQGNANLR
LPASVLGAGFRAVMSYLQVICEQHRLVEQHLDKFAAPATEGEGGLPIRSRPTDANALSAL
VARRLGAAAVTGVLDAKYCGTPAALAELPKLQAVYVADVRHNAWRSVPAEVLRLNGLVVL
NASDNDIESLADGVTPQHLGVLNLSFNRLASLPAALGAAPVLQQMYLANNRLADLPRTFA
CLPMVDLFLSENEFEKVPVAVLGMSQLAKLSMACCRLAEVPDALGSVATLKFLDLSFNAL
RGLPDGLSRLTQLNALNVSFNPLGPGFPPVLTALTSLLELNLDHTGVADVPEGVGEMRRL
EGLQLEGCPLPPTEAALYAANPLLLVQVHNTALTSLDLSGLGLDKVPKLDRLLGLTALDL
SHNRLTRPPTELLPLTQLATLSLRDNPLVQPYAALLEAQGEMAVLDLLNPAADKLDLAGC
GLRTVPAEVAPHAGVLTQLKMAHNRLGAPAADGGGDDAAVGAAAAAAAAALPDWLDKFGS
LSTVVLDHNCFTELPPVLGRLPKLSILMASSNALAGSPLTPELLGGGLSRLQALVLQGNA
VAELPPLISRLTELKALVLQSNQLTVLPDQLCGCVGLRLLDLSHNALRALPSGLGALSRL
KSLKLHHNALPSVPRGLSCLGALTELLLSHNPLPLQGAELNATGAPAVRKMVAALLDACA
ALPAAAHAAELEAAAAAIAAKAATMKAKEEEEAAAAAAVAEAEAAAAAVVADLDALREEE
EARAAAPPPAAPAEGEIKTLEGPEAIQRRVEALQRELHAMHPDSKWAYVAKHVETLSKDP
LRPKSGAWHENVPIMNIPRIIAAISSPPPPPPTGPGADGKGAPAGLDADGKPLRPQVMHR
FKRVVDQSAMAMQLLNRVQGVLQPGGGGGGGGAGGGARGMPPQPMGMPGTPGMMMPPPPG
MFPPGMMPPPPGMFPPGMMPPPPGMFPPGMMPPPPGMFPPGMMMPPPGMFPPGMMPPPGM
MPPGMMPPPPPR
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgaaataaacaaggagggcatgggcctgcccacggtgccagccgacgagctc
caagcacagccggactgcaaggcgttgcggcttgcaaagaatgccatctcggtctttccg
ggcggggtcttgcccttggtggcgaagctccaactactggatttgacggggaacaagctt
tccggcgtccctggtgatctgactcggtgcagcggcctgcgcacgctgctgctgagccac
aacagcctggccggtgtgcccgacgctgttttcgggctggtgcggctgcggcggctggag
ctggcgcgctgcgggctggcggacgtggacggcgcctggttccagctgacggcgctcaag
cacctggacctgtcccacaacgacctgcgcacgttgccgcccgacatcggctggctgccg
ctggagccggagcggggcgagggcgcggcagcagcagcagcagcagaggaggaggagggg
ccggctgcggggccctggtcggggccggggctgcgactgcagggcaacgccaacctgcgg
ctgccggcgagcgtgctgggggcaggcttccgagccgtcatgagctacctgcaggtcatc
tgcgagcagcaccggctggtggagcagcacctggacaagttcgcggcgccggccacagag
ggggagggggggctgcccatacggtctcggcccaccgacgccaacgcgctgtctgcgctg
gtggcccggcggctgggcgcggcggcggtgacgggcgtgctggacgccaagtactgcggc
acacccgcggcgctggcggagctgcccaagctgcaggcggtgtacgtggctgacgtgcgg
cacaacgcctggcgctccgtcccggccgaggtgctgcggctcaacgggctggtggtgctc
aacgcctcggacaatgacatcgagagcctggcggacggcgtgacgcctcagcacctgggt
gtgctgaacctgtccttcaaccgcctcgcctcgctgcccgccgcgctgggcgccgcgccg
gtgctgcagcagatgtacctggccaacaaccgcctggccgacctgccgcgcaccttcgcc
tgcctgcccatggtggacctgttcctgtcggagaacgagttcgaaaaggtcccggtggct
gtgctgggcatgagccagctggccaagctgtccatggcctgctgccgcctggccgaggtg
ccggacgcgctgggcagcgtggccacactcaagtttctggacctgtcgttcaacgcgctg
aggggcctgcccgacggcctgagccgcctgacgcagctgaacgcgctcaatgtgtcgttc
aacccgctgggccccggcttcccccccgtgctcaccgccctcacctccctgctggagctc
aacctggaccacacgggcgtggcggatgtgccggagggcgtgggcgagatgcggcggctg
gaggggctgcagctggagggctgcccgctgccgcccacagaggccgccctgtacgcggca
aacccgctgctgctggtgcaggtgcacaacacggcgctgacgtcactggacctgtcgggg
ctggggctggacaaggtgcccaagctggaccggctgctggggctgacggctctggacctg
tcccacaaccgcctcacgcggccgcccacggagctgctgcccctcacacagctcgccacg
ctcagcctgagggacaacccgctggtgcagccctacgccgcgctactggaggcgcagggc
gagatggcggtgttggacctgctgaaccccgcggcggacaagctggacctggcgggctgc
gggctgcgcacggtgccggccgaggtggcgccgcacgccggcgtgctgacgcagctcaag
atggcgcacaaccgcctgggcgcgccggcggccgacggcggcggcgacgacgcggcggtg
ggcgcggcggctgcggctgctgctgctgcgctgccggactggctggacaagttcggcagc
ctgagcactgtggtgctggaccacaactgcttcacggagctgccgccggtcctgggccgc
ctgcccaagctgtccatcctcatggcctcttccaacgccctggccggcagcccgctcacg
cccgagctgctgggcggcggcctgagccgcctgcaggcgctggtgctgcagggcaacgcc
gtcgcggagctgccgccgctcatatcgcggctcacagagctcaaggcgctggtgctccag
tccaaccagctgacggtcctgcccgaccagctgtgcggctgcgtgggtctgcggctgctg
gacctctcccacaacgccctgcgtgcgctgccctccggcctgggcgccctgtcgcgcctc
aagtcgctcaagctgcaccacaacgcgctgcccagcgtgccgcgcgggctgagctgcctg
ggcgccctcacggagctgctgctgtcgcacaacccgctgccgctgcagggcgcagagctg
aatgccactggcgcgcccgctgtgcgcaagatggtggcggcgctgctggacgcctgcgcc
gcgctgcccgccgccgcacacgccgccgagctggaggcggcggcggcggccatcgccgcc
aaggccgccaccatgaaggccaaggaggaggaggaggccgcggcggcggcggccgtggcg
gaggcggaggcggcggcagcggcggtggtggctgacctggatgcgctgcgggaggaggag
gaggcgcgcgcggcggcgccgccgcctgcggcgcccgcggagggcgagatcaagacgctg
gagggcccggaggccatccagcggcgcgtggaggcgctgcagcgggagctccacgccatg
cacccggacagcaagtgggcgtacgtggccaagcacgtggagacgctgtccaaggacccg
ctcaggcccaagtcgggagcatggcacgaaaacgttcccatcatgaacatcccgcgcatc
atcgccgccatcagctcgccgccgccgccgccgcccaccggccccggcgccgacggcaag
ggcgcgccggcgggccttgacgcggacggcaagccactgcggccgcaggtgatgcaccgc
ttcaagcgggtggtggaccagtccgcaatggccatgcagctgctcaaccgggtgcagggc
gtgctgcagcccggcggcggcggcggcggcggcggagcaggaggcggagcccgaggcatg
ccgccacagcccatgggcatgcccggcacgcccggcatgatgatgccgcctccccccggc
atgttcccgccgggaatgatgcctccgcctcctgggatgttcccgcctgggatgatgccc
ccacctccgggcatgtttcctccgggcatgatgccgcctccccccggcatgtttcccccc
ggcatgatgatgcctcccccgggcatgttcccacctgggatgatgccccctcccggcatg
atgcctccgggtatgatgccgcccccgccgccacggtga
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