Chlamydomonas reinhardtii: CHLRE_04g214250v5
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Entry
CHLRE_04g214250v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_04g214250v5
03036 Chromosome and associated proteins [BR:
cre03036
]
CHLRE_04g214250v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CHLRE_04g214250v5
Chromosome and associated proteins [BR:
cre03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CHLRE_04g214250v5
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
CHLRE_04g214250v5
microRNA pathway
RISC loading complex
CHLRE_04g214250v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
5724236
NCBI-ProteinID:
XP_042925128
UniProt:
A0A2K3DTU5
LinkDB
All DBs
Position
4:1422517..1436368
Genome browser
AA seq
1095 aa
AA seq
DB search
MSGRGRGGGGGYGGGYGGGGGGSRGGGGGGGSGGGDRGYGGGGGGRGGGGYGGGSAGGGG
YGGGGGRGGGGGGGGYGGGGGGRGGGGGGGGVVSPQQAAATLDVVLKSARTLTAKVNVET
TPDGRPLGITRRPNAGTVGKAVALLANYFALATTPAFPGQAYHYDVEIRSVEEAAGGGGG
GGRGGGRGGGGGGGGGRGGRRDLAPASATGDVPGGAAAAAAAEDLPPRLAHRVMAAAAAA
HGWPAGAWRFDGRKNLFLPGELLPREVREWPVTLKPREGDKSERDKGFVVATKWAACVGL
TQLQDYLAQRQQTAPRDAMQVLDIVIRHAFPINPRCTGGGRGFYYGGKGVLDIVIRHAFA
IDPRCTVVGRGFYYGGEGVMPLGGGAEVWSGFQQSFKAVQAGLMLNLDSSFAAFMSARPL
PELLAEGAGVRGGPAQLAAADPRRLRAAARSLVGFKVEFPMPGGRARRKMLTGLSEQGAD
RTMFMNEKEGREMSVAEYFRSTGRPLRHPGLPCANVGDRRRAVYIPLELCTVVAGQRRMK
LDATQSAGMITAAKQDPAVKAEACNKQAKRVAEALAAGGTERSWGLKLGTGMLPVQGRVL
PNPVLQYGNRQDFDAGPLGSWNTLNVKFVDARALDSWAVAVMMNQADVDFDGDNSIWKFL
EDLCSAMITRGMRVASPVTRGSNDSPPVEYGGAAAGGGAAGRGGGARGVEATLRAAADAA
AARYKKPAQLVLVVLPVKPSDEYREVKRVSDIELGIPSQVVVGGKARVGYREQRGGGPQY
CANVAMKINNKLGGVNVQLSGGLRYMPVLGGAGSVPFMVLGADVTHPTGAAARADSRDPS
VAAVVGSLDASLGRWASRVLLQAGRQEVITGMCGATKELLLEFYRANKQVKPQRLVMYRD
GVSEGQFEQVLAEEFTALRRACRELEEGYRPAITFVVVQKRHNTRLLPNDRASADPKGNV
VPGTVVDSGITAPDGFDFYLNSHSGLQGTNKPAHYHVLVDEIGFGADGMQLLTYWLCYLY
QRTTKSVSYCPAAYYADRAAFRGRTLLAASSSASDSASESGSRAGRGAGAAEGGASAPPT
FAGIHRNLSNVLYFM
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgaggccgaggcggaggtggaggctatggcggaggctacggcggaggcggg
ggaggctcccgcggcggcggcggcggcggtgggagcggtggcggcgaccgaggatacggc
ggtggcggcggcggccgcggaggtggcggctatggtggcggcagcgctggcggcggtggc
tacggtggcggcggcggtcggggcggcggaggcggcggaggcggctatggtggaggcggc
ggcggccgcggaggcggtggcggcggcggcggcgtggtgagcccgcagcaggcggcggcg
acgctggacgtggtcctcaagtcggcccggaccctgaccgccaaagtcaacgtggagacg
acgcccgacggccggccgctgggcatcacgcgccgccccaacgccggcaccgttggcaag
gcggtggcgctgctggccaattacttcgcactggccaccacacccgccttcccggggcag
gcctaccactacgatgtggagatacgctccgttgaagaggcggcaggaggaggaggaggc
ggcggccgtggcggcggccgtggcggcggcggcggcggcggcggcgggcgcgggggccgg
cgtgacctggcgcctgctagtgctactggcgacgtgccgggtggcgccgccgccgccgcc
gccgctgaggacctgccgccgcggctggcgcaccgcgtgatggcggcggcggcggcggcg
cacggctggccggcgggggcgtggcggtttgatgggcggaagaacctgttcctgccgggg
gagctgctgccgcgcgaggtgcgggagtggcctgtgacgctcaagccgcgcgagggcgac
aagagcgagcgcgacaagggcttcgtggtggctaccaagtgggcggcgtgtgtggggctg
acgcagctgcaggactacctggcgcagaggcagcagacggcgccgcgcgacgccatgcag
gtgctggacattgtgatccggcacgccttcccaatcaacccgcgctgcaccggggggggc
cgcggtttctactacggcgggaagggggtgctggacattgtgatccggcacgccttcgcg
atcgacccgcgctgcaccgtggtgggccgcggcttctactacggcggggagggggtgatg
ccgctggggggcggcgcagaggtgtggagtggattccagcagtccttcaaggcggtccag
gccggcctcatgctcaacctggactcctccttcgcagccttcatgtccgcccgcccgctg
cccgagctgctggcggagggcgcgggcgtgcgcggcggcccggcgcaactggcggcggcc
gacccacgccggctgagggcggctgccaggtcgctggtggggttcaaggtggagttcccc
atgcccggcggccgcgctcggcgcaagatgctgacggggctgagcgagcagggagcagac
cgcaccatgttcatgaacgagaaggaggggcgtgagatgtcagtggccgagtacttccgc
tccactggccgcccgctgcgccaccccggcctgccctgcgccaacgtgggcgaccgccgc
cgcgcagtctacattccgctggagctgtgcactgtggttgctggccagcggcgcatgaag
ctggacgccacgcagtcggccggcatgatcaccgccgccaaacaggatccggcggtgaag
gccgaggcatgcaacaagcaggccaagcgggtggccgaggctctggctgcgggcggcact
gagcggtcctggggcctgaagctgggcaccggcatgctgccggtgcaggggcgcgtgctg
cccaaccccgtgctgcagtacggcaaccgacaggacttcgacgcggggccgctgggcagc
tggaacaccctcaatgtcaagtttgtggacgcacgcgcactggactcgtgggccgtggcc
gtcatgatgaaccaggcggacgtggactttgacggcgacaacagcatctggaaattcctg
gaggacctctgctcggccatgatcacccgcggcatgcgcgtggccagccccgtgacccgg
ggctccaacgacagcccgccagtggagtacggcggcgcggcggcgggcggcggcgcagca
ggccgcggcggcggggcccgcggcgtcgaggcgaccctgcgcgcggcggcagacgcggcg
gcggcgcggtacaagaagccggcgcagctggtgctggtggtgctgccggtcaagccctcg
gacgagtaccgggaggtgaagcgcgtgtcggacatcgagttgggcatacccagccaggtg
gtggtggggggcaaggcgcgtgtgggctaccgcgagcagaggggcggcggcccgcagtac
tgcgccaacgtggccatgaagattaacaacaagctgggcggggtcaacgtgcagctcagc
ggcggactgcgctacatgcccgtgctgggcggcgcgggctccgtgcccttcatggtgttg
ggcgccgacgtgacgcaccccaccggcgccgccgcgcgcgccgacagccgcgacccctcc
gtggcggctgtggtgggcagcctggacgccagcctgggccgctgggccagccgcgtgctg
ctgcaggcggggcgccaggaggtgatcacgggcatgtgcggcgccacaaaggagctgctg
ctggagttctacagggcaaacaagcaggtcaagccgcagcggctggtcatgtaccgcgac
ggcgtgtcggagggccagttcgagcaggtcctagcggaggagttcacggccctgcgccgc
gcctgccgcgagctggaggagggctaccggcccgccatcaccttcgtggtggtgcagaag
cgccacaacacccgcctgctgcccaacgaccgcgcgtcggccgaccccaagggcaacgtg
gtccccggcacggtggtggacagtggcatcaccgccccggacggcttcgacttctacctc
aacagccactccggactgcagggcaccaacaagcccgcccactaccacgtgctggtggac
gagatcgggttcggcgccgacggcatgcagctgctcacctactggctgtgctacctctac
cagcgcaccaccaagtcggtcagctactgcccggccgcctactacgccgaccgcgccgcc
ttcaggggccgcacactgctggccgcctcctcctccgcctctgacagcgcctccgagtcc
ggcagccgagccggccgcggcgcgggcgcggctgagggcggcgccagcgccccgcccacc
ttcgccggcatccaccgcaacctgtccaacgtgctgtacttcatgtag
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