Chlamydomonas reinhardtii: CHLRE_04g214501v5
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Entry
CHLRE_04g214501v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHLRE_04g214501v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_04g214501v5
03016 Transfer RNA biogenesis [BR:
cre03016
]
CHLRE_04g214501v5
Enzymes [BR:
cre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CHLRE_04g214501v5
Messenger RNA biogenesis [BR:
cre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CHLRE_04g214501v5
Transfer RNA biogenesis [BR:
cre03016
]
Prokaryotic type
tRNA degradation factors
CHLRE_04g214501v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
KH_KhpA-B
KH_2
S1
Motif
Other DBs
NCBI-GeneID:
5724232
NCBI-ProteinID:
XP_042925121
UniProt:
A0A2K3DTU2
LinkDB
All DBs
Position
4:complement(1353109..1366794)
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AA seq
788 aa
AA seq
DB search
MNMQLGMQNKLARHAPSRASHGMPAVFSSLATGSRSAVHAASSICSSSGANARTSLRRMR
ALPGRRGMHIAAQLAPATYAPPKADAVILTLPGGKEIKLETGEIGRQANGAIMATAGETM
LYATACCSASPTGDGSFTPLTVNYAERFSAAGRTSGGFVKRDGRPRDAEVLVSRLVDRPI
RPMFAKGWANDTQILEWVLSYDGVNDPEPLAITAAAAALLISDIPLKKAVAGVRVGMSAD
GGFIINPTVEEMETSRLDLMVAGTRDAVLMIEGFCDFLTEEQMIEALGKGSEAIASLCDQ
MEAWAKKVGKPKRTDAVVTVPEELESRLMELVGDSLTAAYKTSLSKEVRGAAVAEAQARA
LEALAAESGAASGSETVGGNGNGGGGRSYTPLQISMALKAVESRSICVATLGSANDALRS
DTMRKPDGEDPESGRFYLQYHFPPSSVGETGRTGAPGRRELGHGELAQRALAPILPDPAQ
FPYTVRVESTITESNGSSSMASVCGGCLAMMDAGVPIARPVAGIAMGLILESNGRNAVLS
DILGSEDALGDMDFKVAGDHDAITAFQMDIKVEGITLDIMAKALQQAKAGRRHILDQMAK
CAPPPANTLSAHAPRMMRLQIDPDKKGAVIGSGGRVIKQIRDVSGATAIDIDESGMVDVM
APSQDAAAKAIEFVKLLASDPEPGTIFRSGLVHVSELDDPAPTDVAAVVKVGDLMDVMVM
GVADGGKLSLSRKAVQRHDRGEEVEMKAGGGGGRGGGGRGGGGRGGGGRGGGGRGGGGGG
GGDRSRRP
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgcagctaggaatgcagaataaattggcgcgccatgcgccaagccgtgctagc
cacggcatgccggcagtcttcagctcgctggctactggcagtcgttctgcggttcatgcc
gcctcgagcatttgcagcagctctggtgctaatgccaggacatcgctgcgtcggatgcgg
gcacttccggggcggcgtggaatgcacatcgccgcacagctcgcgcctgccacctacgct
cccccgaaggcggatgccgtaatcctgacgctgcccggaggcaaggagatcaagctggag
acgggcgagatcggccgccaagccaacggcgcaatcatggccaccgctggcgagaccatg
ctgtacgccaccgcctgctgctcagcctcgcccacaggcgacggctccttcacaccgctc
acggtcaactacgccgagcgcttctccgcagctggccgcaccagcggtggctttgtgaag
cgcgacggccgccctcgtgacgccgaggtgctggtgagccggctggttgaccgccccatc
cgccccatgttcgccaagggctgggccaacgacacccagatcctggagtgggtgttgtcg
tacgacggcgtcaatgaccccgagccgctggccattacggcggcggcggcggcgctgctc
atctcggacatcccgctcaagaaggcggtggcgggcgtgcgtgtgggcatgagtgccgac
ggcggcttcattatcaaccccactgtggaggagatggagaccagccgccttgaccttatg
gttgcgggcactcgggacgcggtgctcatgatcgagggcttctgcgactttttgacggag
gagcagatgatcgaggcgctgggcaagggcagtgaggccatcgcctctctgtgcgaccaa
atggaggcctgggccaaaaaggtgggcaagcccaagcgcacggacgcggtggtgactgtg
cccgaggagctggagtcgcggctgatggagctggtgggagacagcctcaccgcagcgtac
aagacctcgctgagtaaggaggtgcgcggtgcggcggtggcggaggcgcaggcacgcgca
ctggaggcgctggcggcggagagcggcgccgccagcggcagcgagaccgttggcggcaac
ggtaacggcggcggcggcaggtcgtacacgccgctgcagatcagcatggcgctcaaggct
gtggagagccgctccatctgtgtggcgacactgggcagtgccaacgacgccctccgctcc
gacaccatgcggaagcccgacggcgaggaccccgagtccggccgcttctacctgcagtac
cacttcccgccctccagtgtgggcgagacaggccgcacaggcgcgcccggccggcgcgag
ctgggtcacggcgagttggctcagcgcgccctggcgcccatcctgcccgacccggcccag
ttcccctacacagtccgtgtggagagcaccatcactgagtccaacggctccagctccatg
gcgtccgtgtgcggcggctgcctggccatgatggatgccggcgtgcccattgctcgcccc
gtggcgggtattgccatgggcctcatcctggagtccaacggccgcaatgccgtgctgtcc
gacatcctgggcagcgaggacgcactgggggacatggactttaaggtggcgggcgaccac
gacgccatcacggccttccagatggacatcaaggttgagggcatcacgctggacatcatg
gccaaggccctgcagcaggccaaggccggtcgccgccacatcctggaccagatggcaaag
tgcgcgccgccgcccgcaaacacgctgtccgcacacgcgccgcgcatgatgcggctgcag
attgaccccgacaagaagggcgcggtgatcggctccggcgggcgcgtgatcaagcagatc
cgtgacgtcagcggcgccacagccattgacatcgacgagtcgggcatggttgacgtgatg
gcgcccagccaggacgccgcggccaaggccattgagttcgtcaagctgctggccagcgac
cccgagcccgggaccatcttcaggtctggcctggtgcacgtgagcgagctggacgaccca
gcgcccacagacgtggcggccgtggtcaaggtgggcgacctgatggacgtgatggtgatg
ggcgtggcggatggaggcaagctgtctctgagccgcaaggccgtccagcgccacgaccgc
ggagaggaggtggagatgaaggccggtggaggcggcggccgcggtggcggcggccggggc
ggtggcggccggggcggtggcggccgcggtggcggcggccgcggcggcggtggtggcggt
ggcggcgaccgttcccgccgcccgtaa
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