KEGG   Chlamydomonas reinhardtii: CHLRE_04g214501v5
Entry
CHLRE_04g214501v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CHLRE_04g214501v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cre03019]
    CHLRE_04g214501v5
   03016 Transfer RNA biogenesis [BR:cre03016]
    CHLRE_04g214501v5
Enzymes [BR:cre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     CHLRE_04g214501v5
Messenger RNA biogenesis [BR:cre03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CHLRE_04g214501v5
Transfer RNA biogenesis [BR:cre03016]
 Prokaryotic type
  tRNA degradation factors
   CHLRE_04g214501v5
SSDB
Motif
Pfam: RNase_PH RNase_PH_C KH_1 KH_KhpA-B KH_2 S1
Other DBs
NCBI-GeneID: 5724232
NCBI-ProteinID: XP_042925121
UniProt: A0A2K3DTU2
LinkDB
Position
4:complement(1353109..1366794)
AA seq 788 aa
MNMQLGMQNKLARHAPSRASHGMPAVFSSLATGSRSAVHAASSICSSSGANARTSLRRMR
ALPGRRGMHIAAQLAPATYAPPKADAVILTLPGGKEIKLETGEIGRQANGAIMATAGETM
LYATACCSASPTGDGSFTPLTVNYAERFSAAGRTSGGFVKRDGRPRDAEVLVSRLVDRPI
RPMFAKGWANDTQILEWVLSYDGVNDPEPLAITAAAAALLISDIPLKKAVAGVRVGMSAD
GGFIINPTVEEMETSRLDLMVAGTRDAVLMIEGFCDFLTEEQMIEALGKGSEAIASLCDQ
MEAWAKKVGKPKRTDAVVTVPEELESRLMELVGDSLTAAYKTSLSKEVRGAAVAEAQARA
LEALAAESGAASGSETVGGNGNGGGGRSYTPLQISMALKAVESRSICVATLGSANDALRS
DTMRKPDGEDPESGRFYLQYHFPPSSVGETGRTGAPGRRELGHGELAQRALAPILPDPAQ
FPYTVRVESTITESNGSSSMASVCGGCLAMMDAGVPIARPVAGIAMGLILESNGRNAVLS
DILGSEDALGDMDFKVAGDHDAITAFQMDIKVEGITLDIMAKALQQAKAGRRHILDQMAK
CAPPPANTLSAHAPRMMRLQIDPDKKGAVIGSGGRVIKQIRDVSGATAIDIDESGMVDVM
APSQDAAAKAIEFVKLLASDPEPGTIFRSGLVHVSELDDPAPTDVAAVVKVGDLMDVMVM
GVADGGKLSLSRKAVQRHDRGEEVEMKAGGGGGRGGGGRGGGGRGGGGRGGGGRGGGGGG
GGDRSRRP
NT seq 2367 nt   +upstreamnt  +downstreamnt
atgaacatgcagctaggaatgcagaataaattggcgcgccatgcgccaagccgtgctagc
cacggcatgccggcagtcttcagctcgctggctactggcagtcgttctgcggttcatgcc
gcctcgagcatttgcagcagctctggtgctaatgccaggacatcgctgcgtcggatgcgg
gcacttccggggcggcgtggaatgcacatcgccgcacagctcgcgcctgccacctacgct
cccccgaaggcggatgccgtaatcctgacgctgcccggaggcaaggagatcaagctggag
acgggcgagatcggccgccaagccaacggcgcaatcatggccaccgctggcgagaccatg
ctgtacgccaccgcctgctgctcagcctcgcccacaggcgacggctccttcacaccgctc
acggtcaactacgccgagcgcttctccgcagctggccgcaccagcggtggctttgtgaag
cgcgacggccgccctcgtgacgccgaggtgctggtgagccggctggttgaccgccccatc
cgccccatgttcgccaagggctgggccaacgacacccagatcctggagtgggtgttgtcg
tacgacggcgtcaatgaccccgagccgctggccattacggcggcggcggcggcgctgctc
atctcggacatcccgctcaagaaggcggtggcgggcgtgcgtgtgggcatgagtgccgac
ggcggcttcattatcaaccccactgtggaggagatggagaccagccgccttgaccttatg
gttgcgggcactcgggacgcggtgctcatgatcgagggcttctgcgactttttgacggag
gagcagatgatcgaggcgctgggcaagggcagtgaggccatcgcctctctgtgcgaccaa
atggaggcctgggccaaaaaggtgggcaagcccaagcgcacggacgcggtggtgactgtg
cccgaggagctggagtcgcggctgatggagctggtgggagacagcctcaccgcagcgtac
aagacctcgctgagtaaggaggtgcgcggtgcggcggtggcggaggcgcaggcacgcgca
ctggaggcgctggcggcggagagcggcgccgccagcggcagcgagaccgttggcggcaac
ggtaacggcggcggcggcaggtcgtacacgccgctgcagatcagcatggcgctcaaggct
gtggagagccgctccatctgtgtggcgacactgggcagtgccaacgacgccctccgctcc
gacaccatgcggaagcccgacggcgaggaccccgagtccggccgcttctacctgcagtac
cacttcccgccctccagtgtgggcgagacaggccgcacaggcgcgcccggccggcgcgag
ctgggtcacggcgagttggctcagcgcgccctggcgcccatcctgcccgacccggcccag
ttcccctacacagtccgtgtggagagcaccatcactgagtccaacggctccagctccatg
gcgtccgtgtgcggcggctgcctggccatgatggatgccggcgtgcccattgctcgcccc
gtggcgggtattgccatgggcctcatcctggagtccaacggccgcaatgccgtgctgtcc
gacatcctgggcagcgaggacgcactgggggacatggactttaaggtggcgggcgaccac
gacgccatcacggccttccagatggacatcaaggttgagggcatcacgctggacatcatg
gccaaggccctgcagcaggccaaggccggtcgccgccacatcctggaccagatggcaaag
tgcgcgccgccgcccgcaaacacgctgtccgcacacgcgccgcgcatgatgcggctgcag
attgaccccgacaagaagggcgcggtgatcggctccggcgggcgcgtgatcaagcagatc
cgtgacgtcagcggcgccacagccattgacatcgacgagtcgggcatggttgacgtgatg
gcgcccagccaggacgccgcggccaaggccattgagttcgtcaagctgctggccagcgac
cccgagcccgggaccatcttcaggtctggcctggtgcacgtgagcgagctggacgaccca
gcgcccacagacgtggcggccgtggtcaaggtgggcgacctgatggacgtgatggtgatg
ggcgtggcggatggaggcaagctgtctctgagccgcaaggccgtccagcgccacgaccgc
ggagaggaggtggagatgaaggccggtggaggcggcggccgcggtggcggcggccggggc
ggtggcggccggggcggtggcggccgcggtggcggcggccgcggcggcggtggtggcggt
ggcggcgaccgttcccgccgcccgtaa

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