Chlamydomonas reinhardtii: CHLRE_04g218300v5
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Entry
CHLRE_04g218300v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K14774
U3 small nucleolar RNA-associated protein 25
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cre03009
]
CHLRE_04g218300v5
Ribosome biogenesis [BR:
cre03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CHLRE_04g218300v5
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Ortholog
Paralog
GFIT
Motif
Pfam:
UTP25_NTPase-like
Utp25_C
Motif
Other DBs
NCBI-GeneID:
5717837
NCBI-ProteinID:
XP_042925187
UniProt:
A0A2K3DU20
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All DBs
Position
4:1934743..1943094
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AA seq
1174 aa
AA seq
DB search
MAGGKLARLLLVGGGASGRDGRTAASGAPAKAPAGDTNGAAARNGSSLAQPHAGKALKIS
AAGVSHNPPPAADSDADAGAGGLRPRKRRRGGAGRTVPLSKAAKAKRAKKEAGPSTKAPA
TTPDAVLAAGAEELDAERQQLLAGRSAYEALMSELSRGGAAGSSGRKAGGGGADSDLRAL
LQRLRNEQMGESSEEEEEEEEAVGEEGEGEEDGSDSEGGDGEEGAGMSIAELEAAVAAAE
AEAAEAEAEAAAEAAALAGAKKQTPAAAAAAAAAAGKGGKGKGKLAVSGAEDGADGADEA
EKDDEEEEDENDEEEEEGAALAGRRAGGGGASTSAANGGRPAAPVVDSWARHVGRELADW
ELVALESGKSDYRDAPPAEPHSRAWGGSARWQLRVFGSSSSSATTAATAAAAGSGAKKRK
GGGSENGGAGVTAAAAAAAPAVGLTALPAAPPTLPEYGVKERLIGLWREVHKEEAAKREQ
QQQQQQPQEGREGKEGKQAAGGGGGGGGGPVLVGSDFVNEQQRSLFSLLNSYADVHLPAR
PYPTDASPSAPDPLMDAVLLHCLNHVTKAADRIKKNNAVLAAAAAREAAARDAARMAAMT
AAAAGGGGAAGAGKRRRRNGRAVVPKPAADAAAAAAAAVAGAAGAEKAAGAEALANGHAE
GNGGAAAASAADGAAEGRGEDVEETGTEAGNDEEEEQQEEAGQQEEKEEEQQEAGQQEEE
KQPDAAAAAEGPARDMEAEALEGGTPRDQGFTRPKVLLLLPLRNSAFRAVRRLVRLALRE
TRSDSVQGKEKFLEQFTDPEEMAEEENMDEAARARLAAKPSEHRALFAGNIDDHFRLGIK
VTKGAVKLFADLYQSDIIVASPVALATKLAEDKRADPHSQPDFLSSVELLVIDRADVMAM
QNWAHVETVVAALNRLPRQQHGTDIMRVRDWYLAGQAARYRQTVLLSSHASAQANALVRA
TANHAGGVRLQVEQPGVLGAVVPQVRQLFERFHADSPAAVGDARFEFFMRTIWPRVKDSV
SRGLLLFVPSYFDFVRLRNALKDDDSVDFATVSEYSSNAEVTRSRARFFHGQRRMLIYTE
RAHFYHRYRIRGIKDVLFYGLPDHGHFYPELLNLLEEGGAGAGAGAGLSGVAGFGHATVT
ALFCGWDVLQLERVVGSARARRMLRGESSTYMFC
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcggtaagcttgcccgcttgctgctcgtgggcggcggcgcgagcggccgagat
gggcgaaccgccgcgagcggagcccccgcaaaagctccagccggcgacacaaacggcgcc
gccgcgcgtaacggctcatcgctagcacagccacacgccggcaaggccctgaaaataagc
gccgctggcgtctcgcacaaccccccgcctgcggcggactcggatgcggacgctggcgcc
ggcgggctccggccccgcaagcgccggcgcggtggcgcgggccgcacggttccgctctcg
aaggccgccaaggccaaacgcgcaaagaaggaggctggccccagcaccaaggccccggcg
accacgccggatgcggtgcttgccgcgggggcggaggagctggatgcggagcggcagcag
ctgctggcgggcaggtccgcctatgaggcgctcatgtcggagctatcccgcggcggcgcc
gctggcagcagcggccgcaaggcgggcggcggcggcgccgactctgacctccgcgctctg
ctgcagcggctgcgcaatgagcagatgggcgagagcagcgaggaggaggaggaagaggag
gaggcggtgggagaggagggagagggagaggaggacgggagcgacagcgagggaggtgac
ggcgaggagggcgcgggtatgagcattgcagagctggaggcggcggtggcggcggcggag
gccgaggccgccgaggccgaggcggaggcggcggcggaggcggcggcgcttgcaggcgcg
aagaagcagacgccggcagcggcagcagcggcagcggcggcggcagggaaaggcgggaag
ggcaagggcaagcttgcagtcagcggcgctgaggacggggcggacggagcggacgaggca
gagaaagatgatgaggaagaggaggatgaaaacgacgaggaggaggaggagggggcagcg
ttggcagggcggcgtgccggcggtggcggcgcctccacctccgccgccaatggcgggcgg
ccggcggcgccggtggttgacagttgggctcgtcacgtgggccgcgagctggcggactgg
gagctggtggcgttggagagcggcaagtctgactaccgcgacgcgccgcccgccgagccg
cacagccgcgcctggggcggcagcgcgcgctggcagctgcgggtcttcggctcctcctcc
tcctcagcaacaacagcagcaacagcagcagcagcagggtcaggcgctaagaagcggaaa
ggcgggggcagcgagaacggcggagccggggttacggcggcggcggcggccgccgcgccg
gcggtgggtttgacggcgctgccggcggcgccgccgaccctgccagagtacggtgtcaag
gagcggctgatcggtctgtggcgggaggttcacaaagaggaggcggcgaagcgcgagcag
cagcagcagcagcagcagcctcaggaggggagggaggggaaggagggcaagcaggcagcc
ggtggcggcggcggcggaggcggcgggccggtgttggtcggcagtgactttgtgaacgag
cagcagcggtcgctgttctcgttgttgaacagctacgcggatgtgcacctgccggcgcgg
ccctaccccacggatgcctccccctccgcccccgacccgctgatggacgccgtactcctg
cattgcctcaatcacgtgactaaggccgcagaccggatcaaaaagaacaacgccgtactg
gcggcggcggcggcgcgggaggcggcagcgcgcgacgcggctcgcatggcggctatgacg
gcggcggcggcgggcggtggcggcgccgccggggccggcaagcgcaggcggcggaacggc
cgggcggtggttccgaagccggcggctgacgcggcggcggcggcggcggcggcggtggca
ggagcagcaggagcagagaaagcggcaggagcagaggcgcttgcaaacgggcatgcggaa
ggcaacggcggcgccgctgctgcaagtgcggcggatggggccgctgagggccgaggcgag
gatgtggaggagacaggcacagaggccggcaatgacgaggaggaggagcagcaggaggaa
gctgggcaacaggaggagaaggaggaggagcagcaggaggctgggcaacaggaggaggag
aagcagcccgacgccgccgccgcggcggagggcccagcccgggacatggaggctgaggcg
ctggagggtggcactccacgcgaccagggcttcacgcggcccaaggtgctgctgctgctg
ccgctgcgcaacagcgcgttccgggcggtgcggcggctggtgcggctggcgctgcgggag
acgcgcagcgacagcgtgcagggcaaggagaagttcttggagcagttcacggaccccgag
gagatggcagaggaggagaacatggacgaggccgcccgcgcccgtctggccgccaagccc
agcgagcaccgggcgctcttcgccgggaatatagatgaccacttcaggctgggcatcaag
gttacaaaaggcgctgtgaagctgttcgccgacctgtaccagtccgacatcatcgtggcc
tcgcccgtggcactggccaccaagctggcggaggacaagcgcgccgacccgcactcgcag
cccgattttctgtcctctgtggagctgctggtgatagaccgcgcggacgtgatggccatg
cagaactgggcccacgtggagacggtggtggcggcgctgaaccgcctgccgcgtcagcag
cacggcacagacatcatgcgagtgcgcgactggtacctggcggggcaggcggcgcgctac
cgccagaccgtgctgctgtcctcgcacgccagcgcgcaggccaacgcgctggtgcgggcg
acggccaaccatgccggcggcgtgcggctgcaggttgagcagccgggtgtgttgggcgca
gtggtgccgcaggtgcggcagctgtttgagcgcttccacgccgacagcccggccgctgtg
ggcgacgcgcgctttgagttcttcatgcggaccatctggccgcgagtcaaggactcggtg
tccagaggcctgctgctgttcgtgcccagctactttgactttgtgcggctgcgcaatgcg
ctcaaggacgatgacagtgtggacttcgcgactgtcagcgagtacagcagcaacgccgag
gtgacgcgctcccgcgcccgcttcttccacggccagcgccgcatgctcatctacaccgag
cgcgcgcacttctaccaccgctaccgcatccgcggcatcaaggacgtgctgttctacggc
ctgcccgaccacggccacttctaccccgagcttctcaacctactggaggagggcggcgcg
ggggcgggggcaggcgcggggctgtcaggcgtggccgggtttgggcacgccacggtcacg
gcgctgttctgcggctgggacgtgctgcagctggagcgggtggtgggtagcgcgcgcgcg
cggcgcatgctgcgcggcgagagcagcacctacatgttctgctga
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