Chlamydomonas reinhardtii: CHLRE_04g219250v5
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Entry
CHLRE_04g219250v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K19681
intraflagellar transport protein 52
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cre03037
]
CHLRE_04g219250v5
Cilium and associated proteins [BR:
cre03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
CHLRE_04g219250v5
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
DUF2194
DUF5506
Motif
Other DBs
NCBI-GeneID:
5717848
NCBI-ProteinID:
XP_001692161
UniProt:
Q946G4
Structure
PDB
PDBj
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All DBs
Position
4:2093096..2096928
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AA seq
454 aa
AA seq
DB search
MEEPGAEEVRILFSTAKGESHTHKAGFKQLFRRLRSTYRPDKVDKDDFTLDTLRSAHILV
LGGPKEKFTAPEVDMLKKFVKNGGSILILMSEGGEEKAGTNINYFLEQFGMSVNNDAVVR
TTHYKYLHPKEVLISDGILNRAVITGAGKSLNSNDDDEFRVSRGPQAFDGTGLEYVFPFG
ATLSVQKPAVPVLSSGKIAYPMNRPVGAVWAQPGYGRIAVLGSCAMFDDKWLDKEENSKI
MDFFFKFLKPHSKIQLNDIDAEEPDVSDLKLLPDTASLADKLKGCLQEIDDVPRDWTSLF
DDSLFKFDTGLIPEAVSLYEKLGVKKGQLNLIPPSFETPLPPLQPAVFPPTIREPPPPAL
ELFDLDESFASETNRLASLTNKCHGEEDLEYYIMEAGHILGLKLQENANAKHVLSEVFRR
IAQYKMGSLGLGQTLDSMGQTLPAANQFGDQFEL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaggagccgggcgcggaggaggttcggattctcttcagcacagcgaagggggaatcc
catacgcacaaggcaggcttcaagcagctatttcgacgattgcgttcaacttatcgtcca
gacaaagtagataaggatgacttcacgctggacacgctgcggtcagcgcacatccttgtg
ctcggtggcccgaaggagaagttcaccgcgcctgaggtggacatgctcaaaaagttcgtg
aagaatggtggctccatcctcattctaatgtcggagggcggcgaggagaaggcgggcact
aacatcaactacttcctcgagcagtttggcatgtcggtgaacaacgacgccgtggtccgc
accacgcactacaagtacctgcaccccaaggaggtgctcatctcggacggcatcctcaac
cgggcggtgatcacgggcgcggggaagtcgctgaacagcaacgacgacgacgagttccgc
gtgtcgcgggggccgcaggcttttgatggcacgggcctggagtacgtcttccccttcggt
gccacgctctcagtgcagaagcccgcggtgcccgtcttgtccagcggcaaaatcgcgtac
cccatgaaccggccagtgggtgcggtatgggcgcagcccggctacggccgcatcgccgtg
ctgggctcgtgcgccatgtttgacgacaagtggctggacaaggaggagaactccaaaatc
atggacttcttcttcaagttcctcaagccgcattccaaaatccaactcaacgacattgac
gcggaggagccggacgtgagcgacctgaagctgctgcccgacacagccagtctggcagac
aagctgaagggctgcctccaggagatcgacgacgtgccgcgcgactggacctcgctgttc
gacgactcgctgttcaagttcgacaccggcctcatccctgaggccgtgtcgctgtacgag
aagctgggcgtgaagaaggggcagctgaacctcatcccgccctccttcgagacgccactg
ccgccgctgcagcccgccgtgttcccgcccaccatccgtgagccgccgccgccggcgctg
gagctgttcgacctggatgagagctttgccagcgagacgaaccggctggcctcgctcacc
aacaagtgccacggcgaggaggacctggagtactacatcatggaggcgggccacatcctg
ggcctcaagctgcaggagaacgccaacgccaagcacgtgctgtcggaggtgttccgccgc
atcgcgcagtacaagatgggcagcctgggcctgggccagacgctggactccatgggccag
accctgcccgcggccaaccagttcggcgaccagttcgagctgtaa
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