Chlamydomonas reinhardtii: CHLRE_04g219750v5
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Entry
CHLRE_04g219750v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CHLRE_04g219750v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cre03032
]
CHLRE_04g219750v5
03400 DNA repair and recombination proteins [BR:
cre03400
]
CHLRE_04g219750v5
Enzymes [BR:
cre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHLRE_04g219750v5
DNA replication proteins [BR:
cre03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CHLRE_04g219750v5
DNA repair and recombination proteins [BR:
cre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
CHLRE_04g219750v5
Bloom's syndrome complex (BTR)
CHLRE_04g219750v5
FA (Fanconi anemia) pathway
CHLRE_04g219750v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ_Zn_bind
ResIII
HRDC
Motif
Other DBs
NCBI-GeneID:
5717851
NCBI-ProteinID:
XP_042925217
LinkDB
All DBs
Position
4:2156706..2171236
Genome browser
AA seq
1769 aa
AA seq
DB search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NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctgtgcgcgctcagcaggcgcccatcgtccagggtccgccggccagcatggac
tggggctttctatactgtctacccgaccagaatgcgacggttctgaggcgtggcacagag
attgacacgtcgttggctagcgggacccatccgtcgtatgtaaagaaggcgatggacctg
ctgctgcgcttccgcaacaccggccccagcgccatcccgcccacacgctacctctacgtg
ccgccgccgcagtcggcgcagccggggcccgctggacagcagggacagccctacacgggc
ccgggccaggcggcggcggggccgtggctgggccgcggcgcgggcgccggcggccctacc
agtggtggccctgggcagggtgtgggcgcgggtgccggtggcggcggcggcccacctgca
gctccttaccagcccggcaaatcccagcccggacccggaaccggacccggaaccggaacc
ggacccggaaccggggccgccgccggcggctactcgcagttgccgcctactcagccgcga
ccggggatggccgctgccggtgtgggtgcgggtgcgggtgccggtcccgcgcggggcggc
ggcggtggcggtggcggcggcggtggcggcgggggtcgcggggatgcgctggaggtggat
gacgatgacgatgacgacctgccggatgtggacatcgacgccatcgtcgccaaccaccag
gccgccggcacaaccgctgccaacggtaataacggccacaacggcaacgggcctggcggc
ggcggcggggcatacggtgggggtggaggtggcggaggcggcggcgccggcgcgtatggt
ggtggtgggggaggcggccagaaccaccagcagagctggggcggcggtggcggcggcggc
tccggtgcaggcgcaggcggtgggtatggcggcggcggcggtggcggcggcggcggcggc
ggttgtggtggtggtggcggtgcctatgggggcagctactccggtggcggcggtgccgga
ggcgtcgctggcggcggcggcggctacggctttggcgccggcgccggcgccggcgctggc
gccggcagcgctggcggcttcggctctggcgccggcggcggcggcttcggcggcccttcc
ggcgccttcggcccttccagcaacttcggaaccggcaacttcggcaccggtggcctgggc
ggcggcggcggcggcggcggcggcgcctactacggcgacgacgcggggccgcggccgccc
gacccctcactgagggccaaggcggcgggcgcgccgcccagccccacacggtatgaggtg
gtggacggcggcgcggaccggcagtggcggcgcggcttcgagtggacggccaagctgcgg
cgcatcaacctggaggtgtttggcaacaagagcttcaggcacaaccaggagtccatcatc
aacgccacactggcggcgcgggacgtgtttgtgctcatgcccacaggcggcggcaagagc
ctgtgctaccagctcccggcgctgatgagtgacagcggcgtcaccattgtcatcagcccc
ctggtgtcactcatccaggaccagatctaccacctgcgcgaggcgggcataggcgccgca
cacctgggtggcagccaggactggcaggaggcacgagagcacatggacggcatccgctcc
ggctcctccgatgtgcggctgctgttcgtgacgccggagaagatcgccaagagcgacgcc
ctggtgcggctgctggaggcgctggaggcggcggggcggctggacagggtggtggtggac
gaggcgcactgcgtgagccagtggggtcatgacttcagacctgactacaaggagctggct
ctgttcaaacggcggtggccgcgtgtgccgctgctggccctcacagccactgccacgccg
cgagtgcaggctgacgtgcggctgcagctgcgcattcccgattgcgtggtgttcaagagc
tctttcaacagacccaacctcaggtacgaggtggtgaagaagggcaaggccatcaccgac
gacctcaagcagctgctgctggagcggttcgtgcacccggtgaagaagagggtgcagtgc
ggcatcgtgtactgcctaagccgcgccgagtgtgagcgggtagctgaagagctgcgcaag
gtccggcagcccaacggccgcatgctggtggcggcccactaccacgccagcctgagtcac
gaggagcgggaggcggtgcagacgcgctggagcaacgacgaggtgcaggtgattgtggcc
accatcgccttcggcatgggcatcaacaagcccgatgttcgcttcgtgatccacttctct
ctgcccaagagcctggagggctaccaccaggagacgggccgcggcggccgtgacggcgcc
gaggcggcctgcctgctgtactacaactacggcgacgcgcagaaggcccgacacatgctg
acgcagagcgcgcaggagaaccagacgccgccccaggtcctccgcagcaacatggactcc
ctcaactccatgatcatgtttgctgaggagcaggtggagtgccggcgtgtgctgctgatg
cagcattttggcgaggcgttcgaccccgccgcctgcaggggcacctgcgacatatgcagg
cagcggcaggcccagggtctgcggcatgaggctcgcgacatgacgggctcggctcggcag
ctggtggagctggtgcgggcggctgggtgcaggtggagtgccagtcatgtggtggacgtg
ttccgagggtccatgagcaaggaggtgaaggcggcgggtcatcacgaactgtcgctgcac
ggctccggcaagagcatgaacaagggtgacgcccagcgcctgcttcgcaagctgctggcg
ctcaacgtgctggcggaggacacacaccgggccgacaacgcctacgccaccatcagcagc
gtcatcaaggtcaacgagcagctggctcagcagatggcgcgtggcggcctcaaggtggag
atgcagttcgcggtgggaggcagcggcggcggcggaggcggcggcggcaaggcaggcaag
agcgctgcaggcgccgctggcggcagccgcgcacgcggcgccggcgccaaagccggtgga
gccgggaccggcggggcggcggcgggcggagccggcggcggcggaggcggcggccgcggc
ggcgcagccgccactgcgagtggcggcggcggaggcggaggcgggcgcggcggcgattgg
ggcgcggatgattgggggccggatggcggtgatgacgactgggcggcggcggcggtggca
ccagggggtggcggcggcggcggtggcggcgacatggactttgtggaggaggagggcgcg
gcgggggacagtgatgtggagattgtggagaggcctgctggcggcgcgccgcgccctcgt
gccgccgccgccgccccgcgcgccgccgtgccggcaacgcgccacaccgccagcgccgcc
agcggcggctacaaccacggcggctacggcggccctggcggcggcggcgtcgccgccgcc
cgccccacgacgtctgcctccagtgccggcggcggcggcgccggcggcggcggcgctacg
tctggtgctggcggcggcggcggcggcggcggcggcgtgacgagcaaccgggctctgaca
cgtgacgacgacgcgctgtgccacctggtgtacgacgccctggtgcagctgcgcggctgg
ctggcctcgcactccagcgagcgcggcaagaagggagaggccatcctgcccagcgccgtg
gtcaaccagctggcgcgcgccaagcccaagaacatgacggatctgctgtcgctcaccctc
accggctacaacgacatgcgcaaacgctcacacggccagaacatcatcgcggtcattgac
atggccaagctgcagtacatggaggcgcggctggcggaccaggacctcgccacggtgcag
ttcgtgctgcaggaggacaagctgcactacggaggaggaggaggaggaggcggagcagga
gcaggcggcggcggcggagcggacggaggcgtgtccatgacccaggctcctccgggcgca
ggtgccacacaggcgccgctgccgtaccacccgcagcagcaccacccgcagcagcaccag
ccgcagccgcccaagcgcgggcgtgacgaccacgactccgcgcccccgcgcccataccca
tacccgcaacagccgcaacagcagccgcaacagcagcagcagcaacagcagccgcagcag
tggtcgggagggactggcggcgccgccggttcggcaggcggccacacgggcgcaggagca
gctgcgggcgggggcccgccgccgccgggtccacgtcagcagggggggccggcggcggct
cggggcgggtacgtggatttggagatgggcggtgtggtgccgcacgtgcagcccttcagg
ggccgcgccacgacaggacccgggagcggagccggagctggggctggagctggagctgca
gctggcccagagcccaagcggcagcacacgggcgggcccggcggcagcaacgccttcgac
ggctaccgctgcggcaccggcaccggcacctcgccgccgccgccaggcgccgccaccacg
ccgtcgccgccacacccgcagcagcaccaggtccaaaaccctcacctccaacaccaccaa
caccagcaagcgcaccagcagccgcaccagcagccgcaccagcagctgcagcagcagccg
ctccagcagccgccacggccggcgctgccgccgcggccgccgcaggcaggcggtggtaac
gcgggcggcggctttgcggccgggggactgtcttggcaacagcaacagcaggggcaacag
cagcagcagcagcagcaggggcagcagcagcaggggcagcaacaagccctcggaggctat
gggggctacggcgctccacaccaggggcagcaggggccgtcaggggcgggcccgggcccc
agcgcgaggggctacgtgccgcctgctttcgcgccagggggcggcggcggctcggctctg
gttaaggctggtccaggcggccatggtggagaaggaggggacggcggggacggctggggg
ccgcagggaggtacaggtggtgcaggaggtggaggcggctggggcagccaaggcgggggt
ggcggcgcaggcagccaggggccagggacacaggggccggcgggcgggcggacagcaggc
ggcagccgcctgtcgctgtccaagcagaagcagcagcaacagcagcagcagccgcagcag
caaggggaattcatcagttttcggaggtga
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