KEGG   Chlamydomonas reinhardtii: CHLRE_04g223850v5
Entry
CHLRE_04g223850v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CHLRE_04g223850v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cre03019]
    CHLRE_04g223850v5
   03036 Chromosome and associated proteins [BR:cre03036]
    CHLRE_04g223850v5
Enzymes [BR:cre01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CHLRE_04g223850v5
Messenger RNA biogenesis [BR:cre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     CHLRE_04g223850v5
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     CHLRE_04g223850v5
Chromosome and associated proteins [BR:cre03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    CHLRE_04g223850v5
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 NA-iREase2 DS
Other DBs
NCBI-GeneID: 5717886
NCBI-ProteinID: XP_001692202
UniProt: A8IT25
LinkDB
Position
4:2780537..2783387
AA seq 405 aa
MATNEDWKQRLNLPPKDARVRTEDVTNTKGNEFEDYFLKRELLMGIFEKGFEKPSPIQEE
SIPIALAGRDILARAKNGTGKTAAFCIPVVERVDPTRPVIQALLLVPTRELALQTAQVCK
ELSKYLSIEVMVTTGGTSLKDDIMRLYQTTHIVVATPGRVVDLASKGVARLNECRMLVMD
EADKLLSPEFQPVVEQLIGYLPDDRQIMLYSATFPVTVKAFKEKFLRKPYIINLMEELTL
KGVTQFYAFVEEKQKVHCLNTLFSKLRINQSIIFCNSVNRVELLAKKITELGYSCYYIHA
KMLQSHRNRVFHDFRNGHCRNLVSSDLFTRGIDIQSVNVVINFDFPKNAETYLHRVGRSG
RFGHLGLAVNLITYDDRINLFKIEQELGTEIKPIPAQIEEKLYCI
NT seq 1218 nt   +upstreamnt  +downstreamnt
atggccaccaacgaggactggaagcagcggctgaacctgccacccaaggatgcgcgcgtg
cgcaccgaggatgtcacgaacaccaagggcaacgagttcgaggactacttccttaagcgc
gagctgctgatggggattttcgagaagggtttcgagaagccctcccccattcaagaagag
tctattcctatcgcgctggccggacgtgatatcctggcgcgtgccaagaacggaacggga
aagacggcagcattctgcatcccggtggtggagagggtcgatcccactcggcctgtgatc
caagccctccttctggtgccgactcgcgagctggcgctgcaaaccgcgcaagtgtgcaag
gagctgtcgaagtacctgagcatcgaggtgatggtcaccaccggtggcactagcctaaag
gacgatatcatgcgtctctaccaaacgacgcacatcgttgttgccacgcccgggcgcgtg
gtggacctggcgagcaagggcgtggcccgcctcaacgagtgccggatgctggtgatggac
gaggcggacaagctgctgtcgccggagttccaacccgtggtggagcagctcatcggctac
ctgcccgacgaccggcaaatcatgctgtactcggctaccttcccggtgaccgtgaaggcc
ttcaaggagaagttcctccggaagccctacatcatcaacctcatggaggagctcacactg
aagggtgtgacgcagttctacgcgttcgtcgaggagaagcagaaggtgcactgcctcaac
acgcttttctccaagctgcgcatcaaccagtcgatcatcttctgcaactccgtcaaccgt
gtggagttgctggcgaagaagattacggagctgggctacagctgctactacattcacgct
aagatgctgcagagccaccgcaaccgcgtcttccacgacttccgcaacggccattgccgc
aacctggtgtcgtcggacctcttcacgcgtggcattgacattcagtcggtgaacgtcgtc
atcaacttcgacttcccgaagaacgcggagacctacctgcaccgcgtcggccgctcgggc
cggttcggccacctgggtctggccgtgaacctcatcacctacgacgaccgcatcaacctg
ttcaagattgagcaggagctggggacggaaatcaagcccattccggcccagatcgaggag
aagctgtactgcatctag

DBGET integrated database retrieval system