Chlamydomonas reinhardtii: CHLRE_04g227350v5
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Entry
CHLRE_04g227350v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHLRE_04g227350v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_04g227350v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CHLRE_04g227350v5
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CHLRE_04g227350v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Tnp_22_trimer
PMEI
NPV_P10
BES1_N
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
5717919
NCBI-ProteinID:
XP_042925383
UniProt:
A0A2K3DUR5
LinkDB
All DBs
Position
4:3347699..3354920
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AA seq
769 aa
AA seq
DB search
MAAERKLKAEIDRTLKKVQEGQEVFDEIWNQYLAHKQAHDQENQNQRDKLEGELKKEIKK
LQRLREQIKGWIAGADIKDKQPLIDARKSIERDMERFKACEKESKAKGNAAGGADRDPKQ
RAKDEARDWINTVVDQLTEKVETMEAEMEELQANVKKRQKPPARLTALEETVGRHKEHVD
RLEKVLRCIDNETIQPDELSDLKEDMDMYLGSEDGDDSGMDMTHVDDMYVMFQDRLDAVD
NAAPAAPLHSVKHGKGAREKELEEAREKERERERAAAAAAKAQLIAQGNTNLKLHDDDEV
RKPGPTPPATGKGGAATAAAAGLPMAVPPLAAPAPAVAAGSARQTAPPTPAKEPDSGTVT
PRTTAVVPVAASPGPGLVTATSETLSPLPPRGAPPGVPAPPGPSQPPAPGTQLGPGGRAA
SGPLPAVAANGTAAGDAAAPGGVPRWLAAAASTPGHTGAASSAGPATGHQSTGPSAGQSQ
DASVDSRTDGPIAGPGGLQDSAPSGPGVASGPFVTPSSGPTAGSAADALASRVAGMGLGT
AAVGLGGPGAPQHGGAGHGVGAGVGPAGTGVGMGANVMAGSVMLPGDLPPVVPAYSVAAA
KQVLEACYARGVMPQLSDTEWKHTRPRHPVAVPASYPKTTPEVIDNPALFRKMDPECLFF
AFYFQPNTYQQFLAAHELKRQSWRFHRHHNAWFQRFTEPSVTSDEYEQGAYVYFDYNIVH
DDMQTGWCYRRKENFTFRYDALEDELRVANLTPQQTVAMAMAQAAGLQG
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaaagaaagctcaaagctgagatagaccgcaccctgaagaaggtgcaggag
ggccaggaggtattcgacgagatatggaaccagtacctggcgcataagcaggcgcatgac
caggagaaccagaaccagcgtgacaagctggagggcgagctgaagaaggagattaagaag
ctacagcgcttgcgagagcaaattaagggatggattgctggtgcggatatcaaggacaag
cagccactgatcgacgcgcgcaagtcgatagagcgggacatggagcgcttcaaagcgtgc
gaaaaggagtccaaagccaaaggcaacgcagctggaggtgctgaccgggacccgaagcag
cgggccaaggacgaggcgcgggactggatcaacacagttgtggaccaactcacggagaag
gtggagaccatggaggcggagatggaggagctccaggcgaacgtgaagaagcggcagaag
ccgccggcccggctgacggcgctggaggagacggtggggcggcacaaggagcatgtggac
cggctggagaaggtgctgcgctgcatcgacaacgagaccatccagcccgacgagctgtcc
gacctgaaggaggacatggacatgtacctgggctctgaggacggcgacgacagcggcatg
gacatgacccatgtggacgacatgtacgtcatgttccaggaccggctagacgcggtggac
aacgccgcacccgccgcgccgcttcacagcgtcaagcacggcaagggcgcacgcgaaaag
gagctggaggaggcgagggaaaaggagcgagagcgggagcgcgcggcagcggcagcggcc
aaggcgcaactcattgcgcagggcaacaccaacctgaagctgcacgatgatgacgaggtg
cgcaagcccggccccacgccccccgcgaccggcaagggcggcgccgcgacggcagcagcg
gcggggctacccatggcggtgccgccgttggcggcgccggcacccgcggtggcggcgggc
agcgcgcggcaaacggcgccgcccacgccggccaaggagccagactcggggacggtgacg
cctcgcacgacggccgtggtgccggtggcggcttcgcccgggcccgggctggtcacggcc
acatccgaaaccctctctccgctcccaccccgcggcgcgccgccgggcgtgcccgctcct
cctggccccagccagccgcccgcaccgggcacgcagttagggccgggcgggcgggcggcc
tcgggtcctctgccggcggttgcggccaacggcaccgctgccggggacgcggcagcaccg
ggcggtgtgccgcggtggctcgcggcggcggcgtcgacgccggggcatacgggggctgcg
tcttcggcggggcccgcgacggggcaccagtcgacggggccgtcggcagggcagtcacag
gacgcgtcggtggactcgaggacggatgggcccattgcggggccaggggggctgcaggac
tcggcgccttcagggccaggcgtcgcaagcgggccattcgtcacgccctcctcagggccg
acggcggggtcagcggcggacgcgctggcatcgcgcgtggcgggcatggggctgggcacg
gccgcggtggggctcggggggccgggcgcgccgcagcatggcggcgctgggcacggcgtg
ggcgcgggcgtgggcccggccgggacgggcgtgggcatgggtgcgaacgtcatggctggc
agcgtcatgctgcccggcgacctgccgccagtggtgccggcctacagcgtggcggcggcc
aagcaagtgctggaggcgtgctatgctcgcggcgtgatgccccagctgtccgacacggag
tggaagcacacgcggccgcggcacccggtggcggtgcccgcctcctatccgaagaccacg
ccagaggtgattgacaacccggcgctgttccgcaagatggacccggagtgcctcttcttc
gccttctacttccagcccaacacctaccagcagttcctggcggcgcatgagctgaagcgc
cagtcgtggcgcttccaccgccaccacaacgcctggttccagcgcttcacggagccgtcc
gtgaccagtgacgagtacgagcagggcgcctacgtctactttgactacaacatcgtgcac
gacgacatgcagaccggctggtgctaccggcgcaaggagaacttcacgttccgctacgac
gcgctggaggacgagctgcgcgtggccaacctcacgccgcagcagaccgtggccatggcc
atggcgcaggccgcggggctgcaggggtga
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