Chlamydomonas reinhardtii: CHLRE_05g238900v5
Help
Entry
CHLRE_05g238900v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cre03009
]
CHLRE_05g238900v5
Enzymes [BR:
cre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CHLRE_05g238900v5
Ribosome biogenesis [BR:
cre03009
]
Eukaryotic type
90S particles
Helicases
CHLRE_05g238900v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
5723276
NCBI-ProteinID:
XP_042924893
UniProt:
A0A2K3DT16
LinkDB
All DBs
Position
5:3057556..3065717
Genome browser
AA seq
770 aa
AA seq
DB search
MDAFALLTGGAHFDRRRYRKDIDAFNPKAVSSAAIQEEAMASARRQGAAGSEVGSKRRQA
KANAKKRRRLNAAAAKAAAGVSEEEDEPDIALFAREGDSDDEEVEEGDEEAEEEEDEEAE
DEEDEDEDEKDAELEGELEEGEEEDEGLEGEDSDEMGEDEEDEGEEVGEDEEDGEAAAAG
RKARGVATAADVSNGAVAGAAGERDGGSELGPLVDDVIPVVHTNDPHEEANLIRKALRIK
ATGTDVPAPLKSFAELASRYKVGRRLLAALRAAGFTAPTPIQRQAIPALLEGRELLAVAP
TGSGKTLAFLVPLLARLKSLRAAAQASGQAEQWPNAVKALVVSPTHELAAQQARVLKLLL
PGSGLRACLLCKATAAGTDFSKVDLLLANPLRLVTLVEAGKVDLSQCRYVVLDEADKLFE
LGFMEQVDALLAAAQHPDVSRALFSATLPERVEDLARSVQQQPLRITVGMKNAATSSVNQ
KLHFVGREAGKLLALRQALADGGLKPPVLVFVGSKERAKALHRELLYDGVHVDSITAGQP
QAARNAAIDNFRAGKTWVLIATDLIGRGMDFVGINTVINYDFPRTTADYVHRIGRTGRAG
HTGEAITFFTEEDAPALRPIANQIRAAGGEVPDWMLALRRDKRAAKRKHLSDRIGAAADF
EAGEGFGGRGGRGGRGGRGGRGGRGGRGGRGGRGGRGGGGGRGGWDGEERGRGRGRGRGG
PGGAAGRGRGESPGGRGRGVGGAGGSRGGPGRGRGRGRGRGAGGGRGGAE
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctttgcgctgcttaccggcggcgcgcatttcgaccgccggcgctacaggaag
gatatagatgcgttcaaccccaaagcggtgagctcggcggcgatacaggaggaggcaatg
gcgtcggcgcggcgccagggcgcggcgggcagtgaagtgggaagcaagcggaggcaagcc
aaagccaacgcgaagaagcggcggcggctgaacgcagcggccgccaaggcggcggcaggg
gtgtcggaggaggaagatgagcccgacattgcgctgttcgcccgggagggcgacagtgac
gacgaggaggtggaagagggcgacgaggaggcggaggaggaggaggacgaggaggcggag
gacgaggaggacgaggacgaggacgaaaaggatgccgagctggagggcgagctggaggag
ggcgaggaggaagacgaggggttggaaggggaggattcggatgaaatgggggaggatgag
gaggacgagggcgaggaggttggggaggatgaggaggacggcgaggcggcggccgcgggg
cgaaaggcccgcggtgtcgcaacggctgctgacgtcagcaacggggcagtcgcaggcgca
gccggcgagcgggacggcggctcggagctgggcccgctggtggatgacgtgattccggtg
gtgcacaccaacgacccccatgaggaggccaacctcatccgcaaggccctccgcatcaag
gccactggcacggacgtgcctgcgccgctcaagagctttgcggagctggcctcacgctac
aaggtggggcggcggctgctggcggcgctgcgtgcggcgggcttcaccgcgcccacgccc
atccagcgccaggccatcccggcgctgctggaggggcgggagctgctggcggtggcgccc
acaggcagcggcaagacgctggcgttcctggtgccgctgctggctcggctcaagtcgctg
cgggcggcggcgcaggccagcggtcaggcggagcagtggcccaatgctgtgaaggcgctg
gtggtcagccccacacacgagctggcggcgcagcaggcgcgtgtgctcaagctgctcctg
cccggcagcggcctgcgcgcctgcctgctgtgcaaggccacagccgccggcacagacttc
tccaaggtggatctgctgctggccaacccgctgcggctggtgacgctggtggaggcgggc
aaggtggacctcagccagtgcaggtatgtggtgctggatgaggcggataagctgttcgag
ctgggcttcatggagcaggtcgacgcgctgctggcggcggcacaacaccccgacgtgtcg
cgggcgctgttctccgccacactgccggagcgcgtggaggacctggctcgcagcgtgcag
cagcagccgctgcggatcacggtgggcatgaagaacgcggccaccagctccgtcaaccag
aagctgcacttcgtgggccgcgaggccggcaagctgctggcgctgcggcaggcgctggcg
gacggaggcctcaagccgcccgtgctggtgttcgtgggcagcaaggagcgggccaaggcg
ctgcacagggagttgctgtacgacggcgtgcacgtggactccatcacggcggggcagccg
caggccgcgcgcaacgccgctatagacaacttccgtgctggcaagacgtgggtgctcatc
gccacggacctcatcggacgtggcatggactttgttggcatcaacacagtcatcaactac
gacttcccgcgcaccacagccgactacgtgcaccgcattggccgcaccggccgcgccggg
cacaccggcgaggccatcaccttcttcacagaggaggacgcccccgcgctgcgacccatt
gccaaccagatccgggcggcaggcggcgaggtgcccgactggatgctggccctgaggcgg
gacaagcgcgccgccaagcgcaagcacctgagcgaccgcatcggcgccgccgcggacttc
gaggccggggagggctttggcggccggggcgggcgcggcggcagaggaggccggggcggg
cgcggcgggcgcggcgggcgcggcgggcgcggcgggcgcggcgggcgcggcggaggcgga
ggtcggggcgggtgggatggcgaggagcgagggagggggcgagggagggggcgtggaggc
ccaggcggagccgcgggccgggggaggggagagagcccgggcgggcgggggcggggtgtt
ggaggtgctggaggcagccggggcgggccggggcgagggcgaggtcgaggccgggggcgc
ggagctggtgggggccggggtggtgccgagtag
DBGET
integrated database retrieval system