Chlamydomonas reinhardtii: CHLRE_06g270850v5
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Entry
CHLRE_06g270850v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CHLRE_06g270850v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cre03036
]
CHLRE_06g270850v5
03400 DNA repair and recombination proteins [BR:
cre03400
]
CHLRE_06g270850v5
Chromosome and associated proteins [BR:
cre03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
CHLRE_06g270850v5
DNA repair and recombination proteins [BR:
cre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
CHLRE_06g270850v5
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
WHD_SOWAH
Motif
Other DBs
NCBI-GeneID:
5721844
NCBI-ProteinID:
XP_042923645
UniProt:
A0A2K3DND2
LinkDB
All DBs
Position
6:complement(2749076..2759451)
Genome browser
AA seq
1887 aa
AA seq
DB search
MDLDVELGLAELGVTAKNANAVEEQIIQEALEETGNGAPDDGPAAGEFTGGPASAAAAAN
AQDGEQQLQLQLQQRRRERQRVASQLATVAAEIGTMSAALATAEEEAQEAAAEATEPKTA
GAVPAGATSLQVALMRDRLAGLRAEQQRLAAEAAQLASGGGVGGGNGGAAGESGDGGAGA
AAAGRSRPRSFGAAAMARHGATGKAAGAAAAGKPPAAGGGGTAAAAPRQAGGKKPQQEPM
HLQQSKRARTEVAPVTRLTADEDDLFGDDDDDSGAAGSAGAGSARLELVETEKDRLIRLG
LLTPFDRLAGYERKKVSTQPAGAAGAGGAGGGGDVAATGAKLPFQRTGEGALRHLGRAAL
SEQEAAAVTRSGRRVGEYLAEAGRQALEAREARPRAKFLEPDQLPQQERDVRKVPAHFWH
QAASARKAGASSKLRRKRTLPRARPGRAGGGGDGLRKAAAAGAAAGSGEAEEEESEGSSG
QEEEEEDAEGEEHQAVAAERRRGGSRRRHSGGRLAGEEAGPAEEGEEEAEEGGTSRQRRR
LRARRSTGGSGGGGDGGGSGGSSDASGGPGAGEGVDDLADSDYTEGSDALDSDAAEDDDI
VMSDDEEEVEEEEEDAGLSGLEDEDEDEMAGGAGSSGGARRRKGRKKGKTQKGGKGAAAA
AAAAAAAAAGVDEDLYDDVDEQFYIDRVRRAAAAEAEARRAEALAKQKPRRGKQPQQQRR
RRRSASAGAGGDAEGNGAAACGRAGGRGSEGGGGGGDGGLGNGGSRELGMLPHCGAYGSE
GGPVVGSGVGGLGAAKAAEAAEQQHVQQEGAAAEAAAAAEAAAAEAEEAEEAAEAEEADV
VFEGGFRVPARLYGRLFDYQRTAVKWLWELHVQGAGGILGDEMGLGKTVQMIAYLAGLHA
SGLYRPSLIVCPATVLRQWMRELRTWAPALRVVLLHESGRNPPSGLLRPDRAGVLEAALS
PCPAGLEPLLGSSSRTSPTPGAPGSGSGSGASVSYPGVVLTTYDQLRLHRDLLLRVRWGV
AVLDEGHKIRNPDSEITLVCKQLHTVHRLIMSGSPIQNRLSELWSLFDFIFPGKLGTLPV
FQAQFAVPIQVGGYANASSLQVTTAYKCAVVLRDLIAPYLLRRRKADVAAQLPAKTEQVL
FCTLVSEQLELYRSYLASKEVGEILEGSRRALCGIDILRKVCNHPDLLERLSAQDAEDYG
NPARSGKLRVAERVLDSWRAAGHKALLFCQTQQMLDIFEKLARSKKSPAWSYHRMDGGTP
VASRSRLIDDFNNNPDVFLFLLTTKVGGLGVNLTGATRVMLYDPDWNPSTDIQARERAWR
IGQSQPVTIYRLITAGTIEEKVYHRQIYKNFLTNKVLRDPRQKRFFTARDISELFTLGPE
YKKGAAAAAAGGGSGAGGDTETARIFGSALDAQELAEAVRQQAEGGAGAAGGSGSGGRGA
GGGGGAGGAGWLSSTAAAAAALRRRGERPNGEEAAAGGGAGAEEDELGQDGEGGEEGGEG
RRGKKRKKGAANGVAAAEQPAAAAAASKPAEEQDESRVLRDLFDGGAGLRGLVDHSRIES
ANDPELITLHAEAQRVAARAAEALRRSRAACAVAPISTPTWTGRHGHAGAPAGQQQAQQA
QPQRRFGNVTNSRMRLGGGAGGAGGAGAGAGGSGPGGSGSVPGGAQPFSGAVAGVQGLAA
GRRMGGGGGGGAGGGVAGGAPSSASLLSQMRSRQQALQGAAAEASSRGVRGSGGGGSGGG
SAAAAAVEPAEALAAEVVTFLDSRGGVVGSEVLVEAFRQTVPPAQMPLFKQVLRQVAGLR
RRAAGGEWVLKKEFRTAAPEAAAAGGLQEGRQGGGEAGAAAAGAGGSSDGGGAGSGAGGA
GDAGGSGAAAGAASGGGSDAYDFIDLT
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atggaccttgatgttgagctgggccttgcggagcttggcgtcacggccaagaatgcgaac
gcggtggaggagcagattattcaagaggcgcttgaagagaccgggaacggagcgccggac
gatgggccagcggcaggcgagttcacaggcggtcccgcttccgccgccgcagctgctaat
gcccaggacggtgagcagcagctgcagctgcagctgcagcagcggcggcgtgagcggcag
cgcgttgcatcgcagctggccacggtggcggcggagattggcaccatgagcgcagcgctg
gccacagcggaggaggaggcacaggaggcagccgcggaggcgacggagccgaagacggcg
ggcgcggtgccggcgggcgcaacgtcgttgcaggtggcgctgatgcgggaccgactggca
gggctgcgggcggagcagcagcggctggcggcagaggcagcgcagctggcttcaggcggt
ggcgtcggaggcggaaatgggggtgcagctggggagtcaggcgatggtggtgcgggcgcg
gcggcggctgggaggagccgtccgcggagcttcggtgccgccgctatggccaggcacgga
gctactggcaaggcggcgggcgctgccgccgccggcaagccgccggcagcaggtggcggc
ggcactgcggcggcggcgccgcggcaggcgggcgggaagaagccgcagcaggagcctatg
cacctgcagcagagtaagcgggcgcgcacggaggtcgcaccagtcacacggctgacggct
gatgaggacgacctgtttggcgacgacgacgacgacagcggcgccgctggcagcgcaggc
gccggcagcgctcgcctagagctggtggaaacagaaaaggaccggctgattcgccttggg
ctgcttactccctttgaccggctcgccggctatgagcggaagaaggtaagcacgcagccc
gccggggccgccggggccggcggagccggcggcggcggcgatgtcgccgccaccggcgcc
aagctgccgtttcagcgcactggcgagggcgctctgcggcacctgggtcgcgcggcgttg
agcgagcaggaggcggcggcggtgacgcgcagtgggcggcgggtgggggagtacctggcg
gaggcggggcggcaggcgctggaggcgagggaggcgcggccgcgggccaagttcttggag
ccagaccagctgccgcagcaggagcgggacgtgcgcaaggtgcctgcacacttctggcac
caggccgcctccgcccgcaaggccggcgccagcagcaagctgcggcgcaagcgcacactg
ccgcgcgcccggccgggccgcgctgggggcggcggcgatggcttgcgcaaggccgccgcg
gcgggcgcggctgccggttccggcgaggcggaagaggaggagagtgaagggagcagcggg
caggaggaagaggaggaggatgcggaaggggaggagcaccaggctgtggcggcggagcgg
cggaggggtggtagccgccgccggcacagcggcggccgcctggcaggggaggaggcgggc
cctgcggaggagggcgaggaagaggcggaggaaggcggcacaagccggcagcggcgacgg
ttgagggcgcggcggtcaaccggcggcagcggcggcggtggtgatggaggcggcagcggc
ggcagttccgacgcgtctggggggcccggggccggcgagggcgtggatgaccttgcggac
agtgactacacggaaggcagcgacgcactcgactcggacgcggccgaagacgacgacatt
gtcatgagcgacgacgaggaggaggtagaggaggaggaggaggacgcggggctgtcaggc
ctggaagacgaagacgaagatgaaatggcgggcggcgcaggcagcagcggcggcgcgcgg
cggcggaaaggcaggaagaaggggaaaacgcagaagggcggcaagggcgccgcggcggcg
gcggcggcggcggccgccgcagcagcgggagtggatgaagatctgtacgatgacgtggat
gagcagttttatattgaccgggtgcgcagggcggcggcagcggaagcagaggcgcggcgg
gcagaggcgcttgcaaagcagaagccgcggcgcggcaagcagccgcagcagcaacgccgg
cggcggcgcagcgccagcgctggcgctggcggcgacgcagaaggcaacggcgccgccgcg
tgcggtcgtgctggcggcagaggtagtgaaggcggcggcggcggaggtgatggtggcttg
ggcaacggcggcagcagggagttagggatgctgccgcactgcggcgcctacggctcagag
ggaggcccggtcgtcggcagcggcgtcggcggcctgggtgcggcgaaggccgcggaggct
gcggagcagcaacatgttcagcaggagggcgcggcggcggaggcggctgctgctgccgag
gcggcggcggcggaggccgaggaagccgaagaggcggcggaagccgaagaggcggacgtg
gtgtttgagggcggcttccgcgtgcctgcgcggctgtacgggcggctgttcgactaccag
cgcacggcagtcaagtggctgtgggagctgcacgtgcagggcgcggggggcatactgggg
gacgagatggggctgggcaagaccgtgcagatgatcgcctacctggccggcctgcacgcc
agcggtctgtaccggccctcgctcatcgtgtgccccgccaccgtgctgcgccagtggatg
cgcgagctgcgcacctgggcgccggcgctgcgtgtggtgctgctgcacgagagcggccgc
aacccgcccagtggcttgctgaggccggacagggcgggcgtgctggaggcggcgctgagc
ccctgcccggcaggcctggagcccctcctcggcagcagcagccgcaccagccccacaccc
ggcgcccccggctccggctccggctccggcgcctccgtctcctacccgggagtggtgctg
acgacgtacgaccagctgcgcctgcaccgtgacctgctgctgcgcgtgcggtggggcgtg
gcggtgctggacgaggggcacaagatccgcaacccggattcggagatcaccctggtgtgc
aagcagctgcacacggtgcaccggctgatcatgagcggcagtcccatccagaaccggctg
tccgagctgtggagcctgttcgacttcatcttccccggcaagctgggcacactgcccgtg
ttccaggcgcagttcgcggtgcccatacaggtgggcggctacgccaacgccagcagcctg
caggtgaccaccgcctataagtgcgccgtggtgctgcgcgacctcatcgcgccctacctg
ctgcggcggcgcaaggccgacgtggcagcgcagctgcccgccaagacggagcaggtgctg
ttctgcacgctggtgagcgagcagctggagctgtaccgctcctacctggcgtccaaggag
gtgggcgagatcctggagggcagccggcgggcgctgtgcggcatcgacatcctgcgcaag
gtgtgcaaccacccagacctgctggagaggctgtcggcgcaggacgccgaggactatggc
aaccccgctcgctccggcaaactgcgcgtggccgagcgcgtgctggactcgtggcgggcc
gctgggcacaaggcactgctgttctgccagacgcagcagatgctcgacatattcgagaag
ctggcccgcagcaagaagtcaccggcgtggagctaccaccgcatggacggcggcacgccg
gtggcctcgcgctcgcggctgattgacgacttcaacaacaacccagacgtgttcctgttc
ctgctcacaaccaaggtgggcgggctgggcgtgaacctgacgggcgccacacgcgtcatg
ctgtacgacccggactggaacccctccacggacatacaggcccgggagcgcgcctggcgc
atcggccagtcgcagcccgtgaccatctaccgcctcatcaccgctggcaccatagaggag
aaggtctaccaccgccagatctacaagaacttcctcacaaacaaggtgcttcgtgaccca
cgacagaagcgcttcttcaccgcccgtgacatctctgagctcttcacactggggcccgag
tacaagaagggcgcggcggcggcggcggccggtggtggcagcggcgctggcggcgacacc
gagacggcacgcatattcggctcggcgcttgacgcgcaagagctggcggaggcggtgcgg
cagcaggcggagggcggggcgggggccgcgggaggcagcggcagtggcgggagaggagca
ggaggaggaggaggcgcaggcggtgcggggtggctgtcgtcaacggcggcggcggcggcc
gcgcttcggcggcgcggcgagcggccgaacggcgaggaggccgcggccggcggcggggca
ggagcggaggaggacgagctggggcaggacggagagggcggcgaggagggcggggagggg
cggcgcggtaagaagcggaagaagggcgctgccaatggcgtggcggctgcggagcagccg
gcggccgcggcggccgccagtaagcctgcggaggagcaagatgagagccgcgtgcttcga
gacctgttcgatggcggcgcaggcctgcgcggcctggtggaccacagccgcatcgagtcc
gccaacgaccccgagctcatcaccctgcacgcggaggcgcagcgggtggcggcgcgcgcc
gcagaggcactgcggcgcagccgcgcagcctgcgccgtggcgcccatctccacgcccacc
tggacggggcggcacgggcacgcgggcgcgccggcgggccagcagcaggcgcagcaggcg
cagccgcagcggcggtttgggaacgtgaccaacagccgcatgcggctggggggcggggcg
ggaggagcgggaggagcaggagcgggggcaggaggcagcggaccgggtgggtcgggaagt
gtgcccggcggcgcgcagccgttcagcggtgcggtggcgggcgtacagggcctggcagca
ggccgccgcatgggcggcggcggcggcgggggtgctggcggtggggttgctggtggcgcg
ccctcctccgcgtcgcttctgtcgcagatgcgcagtcggcagcaggcgctgcagggcgcg
gctgcggaggccagcagccgtggcgtgcgcggcagcggaggcgggggcagcggaggcggc
agcgccgccgccgccgccgtggaaccggcggaggcgctggcggcagaggtggtgaccttt
ttggattcacgcggcggggtggtgggaagtgaggtgctggtggaggcgttccggcagacg
gtgccgccggctcagatgccgctgtttaagcaggtgctgaggcaggtggcggggctgcgg
cggcgggcggcaggcggcgagtgggtgctgaagaaggagttcaggactgctgcgccggag
gcggcggcggcgggggggctgcaggaggggcggcagggcggcggggaggcaggagcagca
gccgcgggagcagggggaagcagtgatggtggtggtgctggaagtggggcaggaggtgca
ggggatgcaggaggcagtggcgcggcagcgggcgcggccagcgggggaggcagcgatgca
tatgatttcattgatttgacctag
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