Chlamydomonas reinhardtii: CHLRE_06g278142v5
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Entry
CHLRE_06g278142v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cre03009
]
CHLRE_06g278142v5
Enzymes [BR:
cre01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CHLRE_06g278142v5
Ribosome biogenesis [BR:
cre03009
]
Prokaryotic type
ribosomal protein modification factors
CHLRE_06g278142v5
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-GeneID:
5723579
NCBI-ProteinID:
XP_042923800
UniProt:
A0A2K3DNZ6
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All DBs
Position
6:complement(3691837..3697942)
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AA seq
524 aa
AA seq
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MQVLLRGLPASVPVTSTHSRRPVQCKAIEAPAPAEKKAGAKKVSLVALGCPKNVVDGEVL
LGDLARAGFEVTDDHEESDAIIVNTCAFVEDAKSESLEAIVEAASLNEDGRRRKLVVTGC
LAQRYSSQLAADLPEADLVVGFQSYGNLAASLQKSMGMEVTPEALAIAEASAAAGAAAAD
GSSAAVAAPAAPAAAGAAAARVQVGAATVPFRPEWNRHRLTPKHSAYLRVAEGCNHACTF
CAIPGFRGKFRSKPWQSVLDEAAHLVAGGAVELNLIAEDTNQYGMDRRDGRDLAQLLREL
GKLEGLRWIRILYAYPSYFNDELIDEIANNPKVCKYLDMPLQHIANLTLLAMNRPPKEHT
TKLLAKLRERIPGLALRTTFISGFPGESDEQHRELVDFVKTFKFERMGCFAFSEEDGTPA
ATMPEQVPRRQRERRRDELISLQQRIGEEWAEGLVGREVDVLVEGYNDDGWLIGRTQWDA
PDVDPLVFLTEAEDESVPRLEVGSIRRCLVTSNSLFDLECTPVP
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgctactccgagggctgccggccagcgtgccggtcacgtccacgcattcacgg
cggccggtgcaatgcaaggctatagaagcccctgcgcccgcggaaaagaaggcgggagct
aagaaggtctcgctggtggccctaggatgcccaaagaacgttgtcgacggtgaggtgctg
ctgggcgacctggctcgtgccggctttgaggtgacggacgaccacgaggagtcggacgcc
atcatcgtcaacacatgcgccttcgtggaagacgccaagagcgagtcgctggaggccatc
gtggaggccgcctcgctcaacgaggacggccgccgccgcaagctggtggtgacgggctgc
ctggcgcagcgctacagcagccaactggcggcggacctgccggaagctgacctggtggtg
ggcttccagagctacggcaatctggcagcctcgcttcaaaagtccatgggaatggaggtt
acgccggaggcgctggcgattgcggaggcgtcggcggcggctggcgccgccgccgcggac
ggctcgtccgcggcggtggcggcgccggcggcgccggcggcggctggcgccgccgccgcg
cgtgtgcaggtgggcgcggcgacggtgccgttccggcccgagtggaaccggcaccggctg
acgcccaagcacagcgcctacctgcgggtggcggaggggtgcaaccacgcctgcaccttc
tgcgccatccccgggttcaggggcaagttccgctccaagccgtggcagtcggtgctggac
gaggcggcgcacctggtggcgggcggcgccgtggagttgaacttgatcgcggaggacacc
aaccagtacggcatggacaggcgcgacggccgcgacctggcgcagctgctccgcgagctg
ggcaagctggagggcctgcgctggatccggatcctgtacgcctacccctcctacttcaat
gacgagctcatcgacgagatcgccaacaacccgaaggtgtgcaagtacctggacatgccg
ttgcagcacatcgccaacctcacactgctggccatgaaccgcccgcccaaggagcacacc
accaagctgctcgccaagctgcgcgagcgcatccccggcctcgcgctgcgaaccaccttc
atcagcggcttcccgggggagagcgacgagcagcaccgcgagctggtggactttgtcaag
acgttcaagtttgagcgcatgggctgtttcgccttcagcgaggaggacggcacgccagcg
gcaaccatgcccgagcaggtgccgcggcggcaacgcgagcggcggcgcgacgagctgatc
agtctgcagcagcgcatcggcgaggagtgggcggaggggctggtggggcgcgaggtggac
gtgctggtggaggggtacaacgacgacggctggctcatcggccgcacgcagtgggacgcg
cccgacgtggacccgcttgtgtttctgacggaggcggaggacgagtccgtgccgcgactg
gaggtgggcagcatccggcgctgcctggtgacgtccaactcgctgtttgacctggagtgc
acgcccgtgccgtga
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