Chlamydomonas reinhardtii: CHLRE_06g278239v5
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Entry
CHLRE_06g278239v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHLRE_06g278239v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cre03041
]
CHLRE_06g278239v5
Spliceosome [BR:
cre03041
]
Common components
Common spliceosomal components
SR proteins
CHLRE_06g278239v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
RRM_7
SRP-alpha_N
Motif
Other DBs
NCBI-GeneID:
5723614
NCBI-ProteinID:
XP_001697982
UniProt:
A8J8W6
LinkDB
All DBs
Position
6:complement(4222107..4225405)
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AA seq
320 aa
AA seq
DB search
MYGGGGDRGGDRGGGGGRYGGGGGGGGGGDRYGGRAIFVGNLPYDVREKELDEIFYKFGR
IRMIDIKKPARPPGFAFVEFEDPRSAEEAARRRNNYEFAGMRMRVEIARGGEAAGAQQPL
RIGYRPIRNTMGFRLYVKNLPRSASWQDLKDFVRRVCKPLYTEVFKDNRDNVVGVVEFES
KEDMKATVRKLDDTEFANPFDKGHYVRLTEDLEERGRSRSRSRSRSRGRERDRARDRSRS
RSRSKSRSRSRSRSPKRDSKSRSRSRSPAAEGGAKSKSRSRSRTRSRSRSKSRSKSRSRS
PPPADNGKEERKEGDAPADD
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtatggtggcggtggcgaccgcggtggcgaccgcggtggtggcggtggccgctacggt
ggaggtggaggtggaggtggcggtggcgaccgttatggtggccgtgccatcttcgtgggc
aacctgccctacgatgtgcgcgagaaggagcttgatgagattttctacaagttcggccgc
attcgcatgattgatatcaagaagcctgctcgcccgccgggcttcgcgtttgtcgagttc
gaggacccccggtctgccgaggaggccgcccgccgccgcaacaactacgagtttgcgggc
atgcgcatgcgtgtggagattgcccgcggtggcgaggccgccggcgcgcagcagccgctg
cgcatcggctaccgccccatccgcaacaccatgggcttccgcctgtacgtgaagaacctg
ccccgctccgccagctggcaggacctcaaggactttgtccgccgcgtgtgcaagccgctg
tacacggaggtgttcaaggacaaccgcgacaacgtggtcggcgtggtggagttcgagagc
aaggaggacatgaaggccaccgtccgcaagctggacgacaccgagttcgccaaccccttc
gacaagggccactacgtgcgcctgaccgaggacctggaggagcgaggccgctcccgctcc
cgcagccgctcccgctcccgcggccgcgagcgggaccgcgcccgcgaccgctcccgcagc
aggtcccgctccaagtcgcgctcgcgctcccgctcgcgcagccccaagcgcgacagcaag
agccgctcgcgctcccgcagccccgctgccgagggcggcgccaagtccaagtcgaggtcc
cgctcccgcacccggtctcgctcgcgctctaagtcgcgctccaagtcgcgctctcgcagc
cccccgcccgccgacaacggcaaggaggagcgcaaggagggcgacgccccggccgacgac
tga
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integrated database retrieval system
