Chlamydomonas reinhardtii: CHLRE_06g282600v5
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Entry
CHLRE_06g282600v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cre03009
]
CHLRE_06g282600v5
Enzymes [BR:
cre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CHLRE_06g282600v5
Ribosome biogenesis [BR:
cre03009
]
Eukaryotic type
Pre-60S particles
Helicases
CHLRE_06g282600v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
CTE_SPB4
DEAD
Motif
Other DBs
NCBI-GeneID:
5720946
NCBI-ProteinID:
XP_042923997
UniProt:
A0A2K3DPR8
LinkDB
All DBs
Position
6:complement(5268044..5273265)
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AA seq
736 aa
AA seq
DB search
MLLVGGTDPAQDVSAFKARGGHVLVGTPGRIEDVLKRCATVDLRRMEVLVLDEADRLLDM
GFKAQLDAVMGRLPKQRRTGLFSATQTEAVQELARAGLRNPVRVNVAVAVQAAKAAAGAG
KEKEKGKAEEKKGMEEEEKGKGKKGKEQQQAAAAAAGAEVEAAAAAEAAAADAAAAGGSQ
KTPNSLSIQYVLCEADEKIPQLVRFLRLHGPSRKVIVYAMTCAAVDHLAAVLPRLPQLAT
AGVRLRALHGRMKQAAREATLEAFRALPAGVLLCTDLAARGLDIPDVHWILQLDPPQDPA
AFVHRVGRTARMGRSGQALVYLTAAEEPYVEFLRLRKVPLTEASQLPPTEGQAPSVAADA
DADDDGAPSTSGRDAAPNATASAGAGGKKKAPGKAAGAAATAGGGGGGGGGGGGGPGGAV
LSAAVSTATADVLAALRSAAERDRDVMEKATKAFVTYVRGYKEHHCKFIFRLQDLHIGRL
ATGLGLLRLPKMPDLKRPLGASEFRPSAVDPSSVPYKDKAREKQRQKGLQQKQQEASRNG
GAASAEERAAAKRKAVAAVAAEAAEARLPAAKRRQLQMKDEAASLNKEYSLLKKLKKGKI
SQHQYNVATGLSDDSDMEEEAEQPAKPAAAGAAAGRLGGGGGDSDTDDGAGSSGSEDEGG
EGGAAGAGGAGKGAAGAGGRVGGAGGRGGKGGRGGPGGRGGRGPLGVKQNRGALQSYIEK
KARKKKRQNAKKAQRQ
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgctgctagtcggcggaaccgaccccgcccaggacgtgtccgccttcaaggcccggggc
ggtcacgtgctggtgggcacgcccggccgcatcgaggacgtgctcaagcgctgcgccaca
gtggacctgcgccgcatggaggtgttagtgctggacgaggctgaccggctgctggacatg
ggcttcaaggcgcagctggacgccgtcatgggccgcctgcccaagcagcgccgcaccggg
ctgttcagcgccacacagaccgaggccgtgcaggagctggcgagggcggggctgaggaac
ccagtgcgggtcaacgtggcggtggcggtgcaggcggccaaggcggcagcgggggcgggg
aaggagaaggagaaggggaaggcggaggagaagaaggggatggaggaggaggagaagggg
aagggcaagaagggcaaggagcagcagcaggcggcggccgcggcggcgggcgcggaggtg
gaggcggcggcggcggccgaggcggcggcggcggatgctgcggcggcgggtggctctcag
aagacgcccaacagcctgagtatccagtacgtgctgtgtgaggcggacgagaagattccg
cagctggtgcgcttcctgcgcctgcacggccccagccgcaaggtgatcgtgtacgccatg
acctgcgccgccgtggaccacctggcggccgtgctgccgcgcctgccgcagctcgccacc
gccggcgtgcgcctgcgcgcgctgcacggccgcatgaagcaggcggcgcgcgaggccacg
ctggaggccttccgcgcgctgcccgccggcgtgctgctgtgcacggacctggcggcgcgc
gggctggacatccccgacgtgcactggatcctgcagctggacccgccgcaggacccggcg
gcgttcgtgcaccgcgtgggccgcacggcgcgcatgggccgcagcggccaggcgctggtg
tacctcaccgcggcggaggagccgtacgtggagttcctgcgcctgcgcaaggtgccgctg
acggaggccagtcagctgccgcccacggagggccaggccccctctgtcgccgccgacgct
gacgccgacgacgacggggcgccgagcaccagtgggcgggacgccgcgcccaacgctacc
gcctccgcaggagccggcggcaagaagaaggcgcctggcaaggccgcgggtgctgccgca
acagctggcggcggcggcggcggcggtggcggcggcggcggcggtccgggcggggcggtg
ctgtcggcggctgtgtccacggccacggcggacgtactggcggcgctgcgcagtgcggcg
gagcgcgaccgcgacgtgatggagaaggccaccaaggcgtttgtgacctacgtgcgcggc
tacaaggagcaccactgcaagttcatattcaggctgcaggacctgcacatcgggcgcctg
gccacgggtctgggtctgctgcggctgcccaagatgccggacctgaagcggccgctgggg
gcgtccgagttccggccctcggcggtggacccctcctcggtgccctacaaggacaaggcg
agggagaagcagcggcaaaagggtctgcagcagaagcagcaggaggccagccgcaacggc
ggcgccgccagcgcggaggagcgggccgccgccaagcgcaaggcggtggcggcggtggcg
gcggaggcggcggaggcgcggctgccggcggccaagcggcggcagctgcagatgaaggac
gaggcggcgtcactcaacaaggagtacagtctgttgaagaagctgaagaagggcaagatc
agccagcaccagtacaacgtggccacggggctgtcagacgactcggacatggaggaggag
gcagagcagccagccaagccggcggcggcgggggcggcggcggggcgactggggggaggc
ggcggcgacagtgacaccgacgacggcgcgggcagcagcgggagtgaggacgagggcggc
gagggcggcgcggcgggagcgggcggggccggcaaaggagcggcgggagcgggcgggaga
gtcggcggcgcgggtgggaggggcggcaagggcgggagaggcgggccgggcggcaggggc
ggtcgcgggccgctgggcgtgaagcagaaccggggcgcgctgcagtcgtacatcgagaag
aaggcccggaagaagaagcggcagaatgccaagaaggcgcagcggcagtag
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