KEGG   Chlamydomonas reinhardtii: CHLRE_06g284500v5
Entry
CHLRE_06g284500v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K11600  exosome complex component RRP41
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CHLRE_06g284500v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cre03019]
    CHLRE_06g284500v5
Messenger RNA biogenesis [BR:cre03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CHLRE_06g284500v5
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     CHLRE_06g284500v5
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 5720981
NCBI-ProteinID: XP_001695347
UniProt: A8J275
LinkDB
Position
6:5461478..5465172
AA seq 245 aa
MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE
LREEGALVVCEYSMAAFSTGERRRRGKGDRRSTELSMVIRNTLEQAVITELLPRSQIDVY
VQVLQADGGTRCAAINAAVLALAAAGVPLRDLVAGCAAGYLDGTALLDLNYTEDSGGGPD
LCVALAPRLDSLYLVQMDNRLPVDTFQAVMELAREGCRTISGVMRAALLEHTQRLAVARG
ITAAV
NT seq 738 nt   +upstreamnt  +downstreamnt
atggagtttgtctcgccagaggggctgcggctggacggccggcggccgcgtgagctgcgg
cgaataaactgccagctagacgtgctgtcaaacgcggatggctcggccatattcgagatg
ggcaacaccaaggtgctggcagccgtgtttgggccgcacgcggtgacccggcgctccgag
ctgcgggaggagggcgcgctggtggtgtgcgagtactccatggcggccttcagcacgggc
gaacggcggcgtcgcggcaagggcgaccggcgctctactgagctgagcatggtgatccgc
aacacgctggagcaggcggtcatcacggagctgctgccgcgcagccagatagacgtgtac
gtgcaggtgctccaggcggacggcggcactcgctgcgccgccatcaacgcggctgtgctg
gcgctggcggcggcgggtgtgccgctgcgggacctggtggcgggctgtgcggcggggtac
ctggacggcacagcgctgctggacctgaactacacagaggactctggcggcggccccgac
ctgtgcgtggctctggctccgcggctggactcgctatacctggtgcagatggacaaccgg
ctgcccgtggacacattccaggctgtcatggagctggctcgtgagggctgccgcaccatc
agcggcgtcatgcgggcggcgctgctggagcacacacagcgactggcggtggcgagaggc
atcactgcagccgtgtag

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