Chlamydomonas reinhardtii: CHLRE_06g284500v5
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Entry
CHLRE_06g284500v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K11600
exosome complex component RRP41
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHLRE_06g284500v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_06g284500v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CHLRE_06g284500v5
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
CHLRE_06g284500v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
5720981
NCBI-ProteinID:
XP_001695347
UniProt:
A8J275
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All DBs
Position
6:5461478..5465172
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AA seq
245 aa
AA seq
DB search
MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE
LREEGALVVCEYSMAAFSTGERRRRGKGDRRSTELSMVIRNTLEQAVITELLPRSQIDVY
VQVLQADGGTRCAAINAAVLALAAAGVPLRDLVAGCAAGYLDGTALLDLNYTEDSGGGPD
LCVALAPRLDSLYLVQMDNRLPVDTFQAVMELAREGCRTISGVMRAALLEHTQRLAVARG
ITAAV
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgtctcgccagaggggctgcggctggacggccggcggccgcgtgagctgcgg
cgaataaactgccagctagacgtgctgtcaaacgcggatggctcggccatattcgagatg
ggcaacaccaaggtgctggcagccgtgtttgggccgcacgcggtgacccggcgctccgag
ctgcgggaggagggcgcgctggtggtgtgcgagtactccatggcggccttcagcacgggc
gaacggcggcgtcgcggcaagggcgaccggcgctctactgagctgagcatggtgatccgc
aacacgctggagcaggcggtcatcacggagctgctgccgcgcagccagatagacgtgtac
gtgcaggtgctccaggcggacggcggcactcgctgcgccgccatcaacgcggctgtgctg
gcgctggcggcggcgggtgtgccgctgcgggacctggtggcgggctgtgcggcggggtac
ctggacggcacagcgctgctggacctgaactacacagaggactctggcggcggccccgac
ctgtgcgtggctctggctccgcggctggactcgctatacctggtgcagatggacaaccgg
ctgcccgtggacacattccaggctgtcatggagctggctcgtgagggctgccgcaccatc
agcggcgtcatgcgggcggcgctgctggagcacacacagcgactggcggtggcgagaggc
atcactgcagccgtgtag
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