Chlamydomonas reinhardtii: CHLRE_06g297904v5
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Entry
CHLRE_06g297904v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHLRE_06g297904v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cre03400
]
CHLRE_06g297904v5
Enzymes [BR:
cre01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
CHLRE_06g297904v5
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
CHLRE_06g297904v5
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
CHLRE_06g297904v5
DNA repair and recombination proteins [BR:
cre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
CHLRE_06g297904v5
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
CHLRE_06g297904v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
AAA_33
zf-C2HE
HIT
Zeta_toxin
AAA_18
CPT
KTI12
DUF7740
Viral_helicase1
AAA
Motif
Other DBs
NCBI-GeneID:
5717027
NCBI-ProteinID:
XP_042924248
UniProt:
A0A2K3DQR5
LinkDB
All DBs
Position
6:complement(7215025..7219400)
Genome browser
AA seq
818 aa
AA seq
DB search
MALRVGNKSSPSCAALTVLQQGESAVLHNGDAFSLICTRPDLAIQVHILPAAQGPPADAA
TREGTAAGYMPAGREGGAAVAAPPGSAPSTSHNSSPERVVAPTTQPSQQSSRHTEASGSY
VTGDGDLDGLSDEGADSGRSGGAGPGPGSLASPVSTGKGQRGKRRGPGAGGKDTARGVGN
NKPPVQGLPPVLLLFAGLPGSGKSTFSRSLQDASTVSWVHVNQDAINKGKPGKREQCVAA
LRAALAEGSCCIIDRCHLDASQRATFLELAAECHVAAHCVALAIPAQACAGRVAARTDHP
GGVQGDNNRAVVFRMAKQQDSKGWPPTAAEGFTSVMDCFTDSDANAAVRAWAAYGAAAAA
GGSGAAAALTTATAVGGSSEGAKPVGAAQGTAEAQAAPTLAMWQAYVAKRKPLAAATAIT
AFFKPAAAKAAAGATGTGAVPGVKAMAAGKAPAASAATEAGPQQAPAAGGSQVGAARSAP
MAGAKAEPGSAVTGARQRGAESPPAAEQRPAKRPATAQPSVGVAPHGGGTGAPAGKGAGS
PGSGHAAKPNAVPGSQQSQGNSGGGSASGTGAASPSPGGGANAFAVLMKGSRQAAAAAAG
AKPSPTGVARATLGGADVDKRFKLDSPWAQALRKAAQDPEGSQQQVLHKDEEVVMIMDAF
PKARSHALVIARDPALRSIADLRAEHLPLLEHMRQVALDWIAKRKEQVPGTAAFKLGFHA
VPSMCQLHLHVISQDFDSPALKNKKHWNTFTTEFFRPLDLVLRELEGHGKLTLISEAEEK
RFEGQELRCHACGLAQKSIPALKSHIVACDAVKCLPGL
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcgcgtagggaacaagtcctcgccgagctgtgctgccttgacggtgctacag
cagggcgagtcagcggtgcttcacaacggtgacgccttcagcttgatctgcacacgaccg
gacctagccatccaggtgcacatactaccagccgcacaggggccgccggccgacgcggct
acgcgggagggaaccgctgccgggtacatgcccgccggccgcgaaggtggcgcggccgtg
gccgcgccacctgggagcgcgcccagcaccagccacaactcaagcccagaacgcgttgta
gcacccacaacacaaccatctcagcaatcctctcggcacacagaggcgtccggatcctac
gttaccggggatggggacctggatggcctcagcgatgagggggcggacagcgggcggagc
gggggtgcggggccaggtccgggcagcttagcatcgcctgtatctacgggtaaaggccag
cgcggcaagcgccgcggtcctggtgccggcgggaaggacactgcacgtggcgtaggcaac
aacaagccgcccgtccagggtttgccgccagtcctgctgctgtttgcgggtttgccggga
tcaggcaaaagcaccttcagccgcagcctgcaggatgcctccaccgtgtcctgggtgcac
gtcaaccaggacgcaataaacaagggcaagcccggcaaacgcgagcagtgcgttgcggcg
ctgcgcgccgccttggctgagggctcctgctgcatcatcgacaggtgccacctggacgcc
agccagcgggccacctttctggagcttgccgccgagtgccacgtggcggcgcactgcgtg
gcgctggccattcccgcccaggcgtgtgctggccgcgtggcggcccgcacggatcacccc
ggcggcgtgcagggcgacaacaaccgggctgtcgtgtttcgcatggccaagcagcaggac
agcaagggctggccgcccacagccgcagagggcttcacctccgtcatggactgcttcaca
gacagcgacgccaatgccgcggtgcgcgcctgggcggcgtacggcgccgcggcagctgca
gggggaagcggcgccgccgccgccctgacaacggctacagcagtgggcgggagctcagaa
ggcgcaaagcctgttggtgcggcgcagggtacggctgaggcgcaggcggcaccgacgcta
gccatgtggcaggcgtacgtggcgaagcgcaagccgctagcggcggctacggctatcacg
gcattcttcaagccagctgcggcaaaggcagcggcaggggcaacggggacgggggcggtg
ccgggtgtgaaagcaatggcagcagggaaggcgccggcagccagcgcggccacagaggca
ggccctcagcaggctcccgcggccggcggctcgcaagtcggggcggcgaggtcggcgccg
atggccggcgccaaggctgagcctggctcagccgtcacgggagcccgacaacgaggcgct
gagtcgccaccagcagctgagcagcgcccggcgaagcggcccgcgacggcgcagccgtca
gtgggggtggcaccgcatggcgggggcacaggcgcgccggcagggaaaggcgcggggtcg
ccggggtctgggcacgccgcaaagccgaatgctgtgccggggagccagcaatcccaaggc
aacagcggcggcggtagcgcgtcgggcactggggcagcatccccgagtcccgggggcggg
gccaacgccttcgccgtgctgatgaagggctcaaggcaggcggcggctgcagcggcaggc
gccaagccaagtccaacaggagttgcgcgggcgaccctgggtggcgctgacgtggacaag
cgcttcaagctggacagcccgtgggcgcaggcgctgcgcaaggcggcgcaggacccggag
ggctcgcagcagcaggtgctgcataaggacgaggaggtggtgatgatcatggatgccttc
cccaaagcacgcagccacgcgctggtgatcgcgcgcgaccccgcactgcgcagcattgcg
gacctgcgggcagagcacctgccgctgctggagcacatgcggcaggtagcactggactgg
atcgcgaagcggaaagagcaggtcccggggactgcagccttcaagctgggctttcacgca
gtcccatccatgtgccagttgcacctgcacgtcatatctcaggatttcgactcgccggcg
ctcaagaacaagaagcactggaacacttttacaaccgaattcttcaggccgctggacctg
gttctccgcgagcttgagggccacggcaagctcacgctgatcagcgaggctgaggagaag
cgttttgagggccaggagctgcgctgccacgcctgcggactggcgcagaagtcgattccc
gcgctgaagagccatattgtggcctgcgacgcggtgaaatgcttgcctgggctgtga
DBGET
integrated database retrieval system