Chlamydomonas reinhardtii: CHLRE_06g306850v5
Help
Entry
CHLRE_06g306850v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03013
Nucleocytoplasmic transport
cre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CHLRE_06g306850v5
03015 mRNA surveillance pathway
CHLRE_06g306850v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_06g306850v5
Enzymes [BR:
cre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CHLRE_06g306850v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CHLRE_06g306850v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
5716869
NCBI-ProteinID:
XP_001691375
UniProt:
A0A2K3DRJ8
LinkDB
All DBs
Position
6:8383026..8390819
Genome browser
AA seq
504 aa
AA seq
DB search
MADDAPAKPTEEAPKAEAPKAEPAKEAAAPEPAKETPKKSWADEAEEEDGPPPGFDDIVK
AVAATKVEEAVDEPDLSLKSEGLRERPEAEITTKTEGDSIYASAHKFEELPLSPELLKGL
YVEMKFERPSKVQALTLPMILTPPHRDLIAQAHNGSGKTTCFVLSMLSRVDPSKQLTQAL
CICPTRELVVQNLSVLRRMAKYTNITSTSTASELEVGGSGLRRDPINEMVVVGTHGKLKN
WVQKRLLDLDGVAILVFDEADEMLKADGFADDSVRLIKMIRKKNPRVQLLLFSATFNDIV
KRFAVSIAPQANQVFVAKEQLSLDVIAQYNVRCPDRQGKTRVLKEMIFPNCERLGQTMIF
VRTRDSAKSLHAEMERDGYKCTSITGDMQPTDRDRVVQEFRDGTTKILISTDVLSRGFDV
SQVTLVINYDVPVERDGVTPAYETYLHRIGRSGRFGRKGAAFNLICTGQDNDVMTRISTY
FKKTIEEIKWDDEDEFIKVLDKTL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgacgcgccagcaaagccgacggaggaggcccccaaggccgaggctcctaag
gccgagccggccaaggaggccgccgctccggagccagcaaaggagactcccaagaaatcg
tgggcggacgaggcggaggaggaggacgggccgccgcccggcttcgatgacatcgtcaag
gcagtggccgccaccaaggtggaggaggcggtggatgagccggacctgtccctgaagagc
gaggggctgcgggagcggccagaggcggagatcaccaccaaaaccgagggtgactccatc
tacgccagcgcacacaagttcgaggagctgcccctcagccccgagctgctcaagggcctg
tacgtggagatgaagttcgagcggcccagcaaggtgcaggcgctcacgctgcccatgatc
ctcacgccgccgcacagggacctcatcgcgcaggcgcacaacggctccggcaagaccacg
tgcttcgtgctgtccatgttgtcccgtgtggacccctccaagcagctgactcaggcgctg
tgcatctgccccacccgcgagctggtggtgcagaacctgtccgtactgcgccgcatggcc
aagtacactaacatcacctccacctccaccgccagcgagctggaggtgggcggctccggc
ctgcggagagaccccatcaacgagatggtggtggtgggcacgcacggcaagctgaagaac
tgggtccagaagcggctgctggacctggacggcgtggccatcctggtgttcgacgaggcg
gacgagatgctcaaggcggacggcttcgcagacgactcggtgcggctgatcaagatgatc
cgcaagaagaacccgcgcgtgcagctgctgctgttcagcgccaccttcaacgacatcgtg
aagcgcttcgcggtcagcatcgcgccgcaggccaaccaggtgtttgtggccaaggagcag
ctgtctctagacgtgatcgcgcagtacaacgtgcgctgcccggaccggcagggcaagacg
cgggtgctcaaggagatgatcttccccaactgcgagcggctggggcagaccatgatcttc
gtgcgcacacgcgactcggccaagtccctccacgccgagatggagcgcgacggctacaag
tgcacctccatcacgggagacatgcagcccaccgaccgcgaccgcgtggtgcaggagttc
cgggacggcaccaccaagatcctcatcagcacagacgtgctgtcgcgcggcttcgacgtc
agccaggtgacgctggtgatcaactacgacgtgcctgtggagcgcgacggcgtcacgcca
gcctacgagacctacctgcaccgcatcggccgctcgggcaggttcgggcgcaagggagcc
gccttcaacctcatctgcacaggccaggacaacgacgtgatgacgcggatcagcacctat
ttcaagaagacaattgaagagatcaagtgggatgacgaggacgagttcatcaaggtgctg
gacaagacgctgtga
DBGET
integrated database retrieval system