Chlamydomonas reinhardtii: CHLRE_06g309050v5
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Entry
CHLRE_06g309050v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHLRE_06g309050v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_06g309050v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CHLRE_06g309050v5
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CHLRE_06g309050v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
5716830
NCBI-ProteinID:
XP_001691212
UniProt:
A8IMK5
LinkDB
All DBs
Position
6:complement(8612962..8617370)
Genome browser
AA seq
721 aa
AA seq
DB search
MLGNPGGLDPSGARGFGYGQQAGQAGFPLGALQGGMQGGLPGVRTGIAGLQAGAAGPQQT
AQNRFAAASTLQSNLQQQLGQYAQAQGRPLTGAQLANGVLAGAAGAGVRAQGIGGLAPLA
AMRQPGVDRAANLSLAANLNAAAAGAAGAGLAGLQGYAAAQNPLAAALQNPQRLTGLGLN
AQLTAAAAAGLGGLQGGNLQSRLQMANAGGLGLLQQNLAGAMPNTNTNTHELLAMLNRQQ
QQKQQQVAQQHQQQQMPGGANAFNALNNLGLSAAGFGAVGGGVGNLGGPGLGLVQQSAQQ
QVAAAAAAAQQQQQQQQQQQQHGDQDGPSFDNNDFPSLLANAAARQGRANAEAMGAAAAA
AAAANDPFAKLGLRTAAAAVAGGAGHAGAGAGGAGGDFQIQNEDFPALPGTSTRDGMGGA
GGLAQQQGVGRGAGASGFGAEHLQQLAAAAGQPGSAEYEAYLRLQQQRGLAPGLLGPGGP
GPMGGKGVGPGGELQGGAAAAKADRFGLMGLLPLIKMTDPDLTMLALGTDLTGLGLNLNA
PGDLHSTLVSPLADNPIKAEPDFDLPSCYKFVPQRLQPGYLSKFKEETLFYMFYSMPGDE
AQLLAADELSVRGWWFHRRYKLWMLHAPGAATQKSQRGERGSFLIFDINQWEIVQKADLE
ILYEDIEVAPRLPRNAKLTGGGQGGAGGAQGPVGAGGAQGQQPGGAGAPQSQGQAGVPGR
H
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgctaggaaatccaggcgggctggacccgagcggtgccagaggatttggatatggacag
caggcggggcaggcgggctttcccctcggtgctctccaaggagggatgcagggcgggcta
cccggcgtcaggactggcattgctgggcttcaagctggagcggcagggccacagcaaacg
gcgcagaaccggtttgctgcagcgagcacgttacagtctaatttgcagcagcagcttggg
cagtacgcccaggcgcaggggcgacctctcacaggcgcacagctagcaaatggcgtcctc
gcgggcgctgctggggccggcgtccgcgcgcaggggataggggggcttgcgccgctcgca
gcgatgcggcagcccggcgtcgaccgcgccgctaacctcagtctggccgccaacctcaac
gccgcggcagcgggcgcagcgggcgctggcctggccgggttgcaagggtacgccgcggcg
cagaaccctctcgcggcggcgctgcagaacccgcagcggctgacggggcttgggctcaat
gcgcagctcacggcggcagctgccgcgggcctgggcgggctgcagggcggcaacctgcag
agccggctgcagatggcaaacgcgggcgggctgggcctgctgcagcagaacctggcgggc
gcgatgcccaacaccaacaccaacacgcacgagctgttggcgatgctcaaccgtcagcag
cagcagaagcagcagcaggtggcgcagcagcaccagcagcagcagatgcccgggggcgca
aacgcctttaacgcgctcaacaacctggggctttcggcggcgggcttcggcgcggtgggc
ggcggcgtcgggaacctgggcgggcccggcctggggctggtgcagcaatcggcgcagcag
caggtggcggcggccgcggcggccgcacagcagcagcagcagcagcagcaacagcagcaa
cagcatggggatcaggacgggcctagctttgacaacaacgacttcccgtcgctgctggcg
aacgcggcggcaaggcagggccgcgccaacgcagaggccatgggcgctgcggcggccgcc
gctgcggcggcgaacgaccccttcgctaagcttggcttgcgcacagcagcggcagcggtc
gcgggcggggcggggcatgccggcgccggtgctggcggggcaggcggcgacttccagatc
cagaacgaggattttccggcgctgccagggacatcaacgcgggacggtatgggtggtgcc
ggtggcctggcccagcagcagggggtgggccggggcgcgggcgcgtctgggttcggtgcg
gagcatctgcagcagctggcggcggccgcgggccagcccggcagcgccgagtacgaggcg
tatttgcggctgcagcagcagcgcggcctggcgccggggcttcttgggcccggggggccg
gggcctatgggcggcaagggcgtggggccaggcggcgagctgcagggtggcgcggcggcg
gccaaggctgaccggttcgggctgatgggtctgctgcctctgatcaagatgacggacccg
gacctgaccatgctggctctgggcaccgacctgacggggctggggctcaacctcaacgcg
ccaggcgacctgcattccacgctggtgtcgccgctggcggacaaccccatcaaggcggag
cccgacttcgacctgccctcctgctacaagttcgtgccgcagcggttgcagccgggctat
ttgtccaagttcaaggaggaaacgctgttctacatgttctactccatgcccggcgacgag
gcgcagctgctggcggccgacgagctgtcggtgcgcggctggtggttccaccgccgctac
aagctgtggatgctgcacgcgcccggcgccgccacgcaaaagagccagcgcggcgagcgc
ggctcgttcctcatttttgacatcaaccagtgggagattgtgcagaaggcggacctggaa
atcctttacgaggatatcgaggtggcgccgcggctgccgcgcaatgccaagctgacgggc
ggtggccagggcggcgccggcggcgcgcagggccccgtgggggccggcggggcgcaggga
cagcagcctggcggggcgggggcgccgcagtcgcagggccaggccggcgtgcccggtcgc
cactaa
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