KEGG   Chlamydomonas reinhardtii: CHLRE_07g313185v5
Entry
CHLRE_07g313185v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03020  RNA polymerase
cre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CHLRE_07g313185v5
  09124 Replication and repair
   03420 Nucleotide excision repair
    CHLRE_07g313185v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cre03021]
    CHLRE_07g313185v5
   03400 DNA repair and recombination proteins [BR:cre03400]
    CHLRE_07g313185v5
Transcription machinery [BR:cre03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     CHLRE_07g313185v5
DNA repair and recombination proteins [BR:cre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CHLRE_07g313185v5
SSDB
Motif
Pfam: RNA_pol_Rpb4 ANAPC8
Other DBs
NCBI-GeneID: 5726332
NCBI-ProteinID: XP_042922401
UniProt: A0A2K3DII3
LinkDB
Position
7:complement(149100..151191)
AA seq 140 aa
MALPKSEMEHADAKVFEHAAVISNSEVATILTEYMRQRREEKPTFQPQPLVQKTLEYVQK
FNCGTNPEAVQAMRNYIESIGLRPYEWGLIANLMPEDSDEATKLIPSLVDNPEDPPEEQR
GLAGDELDRLLAEVQNLRHA
NT seq 423 nt   +upstreamnt  +downstreamnt
atggcgctcccgaagtcggagatggagcatgcggacgccaaggtgtttgagcacgcggcg
gtcattagtaactcagaggtagctacaatcctgacggagtatatgcgacagcggcgagag
gagaagccgacgttccagccgcagccgctggtgcagaagacgctcgagtacgtgcagaag
ttcaactgcggcaccaaccccgaggccgtacaggccatgcgcaactacatcgagtccatt
gggttgcggccgtacgagtggggcctcatcgccaacctgatgcccgaggacagcgacgag
gcaaccaagctcatacccagcctggtggacaacccggaggacccgcccgaggagcagcgc
ggtctggcgggcgacgagctggaccgactgctggccgaggtgcagaacctgcgccacgca
tag

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