Chlamydomonas reinhardtii: CHLRE_07g314900v5
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Entry
CHLRE_07g314900v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cre03041
]
CHLRE_07g314900v5
03009 Ribosome biogenesis [BR:
cre03009
]
CHLRE_07g314900v5
Enzymes [BR:
cre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CHLRE_07g314900v5
Spliceosome [BR:
cre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CHLRE_07g314900v5
Ribosome biogenesis [BR:
cre03009
]
Eukaryotic type
90S particles
Helicases
CHLRE_07g314900v5
Pre-60S particles
CHLRE_07g314900v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
5726525
NCBI-ProteinID:
XP_042922433
UniProt:
A0A2K3DIM4
LinkDB
All DBs
Position
7:complement(397605..404856)
Genome browser
AA seq
731 aa
AA seq
DB search
MDKDDHKRKRKRSRSKAGRDDGEDAGAGGGAAVKATPAKQVAANGKGAKPVAVVKGTPSA
APSSKGKPAAAAKQAAPPLAKKAKADAGRPSKQQKRPAKPAPEDEDEDEEDEDEDAEGFN
SEDFDAMLMGGGPDGDDDEDDDEEDDGEGEEEEEEDGGEGEEDEEEEGEGEEDSDVAIDG
EEEAEEEEEDEEAADAKAAARRKARDDKDNVRMARGGIEVERHVASVAGIMSASEFTSLE
LTANTKKAIDEMGFSHMTEVQARTIPALLTGRDVLGAARTGSGKTLAFLIPCAELLYRAK
FMPRNGTGAVVISPTRELALQIYGVARDLLKHHTQTHGIVMGGANRRTEAEKLVKGVNLL
VSTPGRLLDHLQNTRGFVYRNLACLVIDEADRILEIGFEEEMRQIIKILPKERQTMLFSA
TQTTKVEDLARISFKHKPLYVGVDDGRSVATREGLEQGYCVVPADKKFLLLFTFLKKNLN
KKVMVFFSSCNSVKFHAELLNYIDIPVKDIHGKQKQQKRTTTFFEFCQAEKGILLCTDVA
ARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGQAGRGRALLLLLPEELGFLKYLKDAK
VPLNEYDFPTSKLANVQSQLERLVEKNYYLHQSAKDAFRSTLLAYNSHSLKEIFNVHRLD
LQAMARSFGFSVPPRVNLQLESHSSHTRKAAKGAPGGKADYRRGLSTGHKFSAANPHGRR
EAGDKRQFVRI
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggacgaccataaacgcaagcggaagcgaagccgcagcaaggccgggcgtgac
gatggagaggacgccggcgccggcggaggcgccgccgtgaaggcgacacccgccaagcag
gtagcggcgaacggcaagggcgctaagcccgtcgccgtcgtcaagggcactccctccgcc
gcgcctagcagcaagggcaagcccgccgcagcagcaaagcaggcggcgccgcctctcgcc
aagaaggccaaggccgacgcgggccggccgtcgaagcagcagaagcggcccgccaagccg
gcccctgaggacgaggacgaggatgaggaggacgaggatgaggacgccgagggattcaac
agcgaggactttgacgccatgctgatgggcggcgggccggacggcgacgacgacgaggat
gacgacgaggaggatgacggcgagggcgaggaggaggaggaggaggatggcggggaaggg
gaggaggacgaggaggaggagggcgagggcgaggaggacagcgacgtggcgatagacggc
gaggaggaggcggaggaggaggaggaggacgaggaggcggcggacgcgaaagcggcggcc
aggcgcaaggcccgggacgacaaggacaatgtgcgcatggctcgcggcggcatcgaggtg
gagcggcacgtggccagtgtggcgggcatcatgtcggcctcggagttcaccagcctggag
ctgacggccaacaccaagaaggccatcgacgagatgggcttcagccacatgacggaggtg
caggcgcgcaccattccggcgctgctcacaggccgcgacgtgctgggcgccgcgcgcacc
ggctcgggcaagacgcttgccttcctgatcccctgcgccgagctgctgtaccgcgccaag
ttcatgccgcgcaacggcaccggcgcagtggtcatcagccccacgcgagagctggcgctg
cagatctacggtgtggctcgcgacctgctcaagcaccacacgcagacgcacggcattgtg
atgggaggagccaacaggcgcactgaggctgagaagctggtcaagggtgtgaacctgctg
gtgtccacccccggccgcctgctagaccacctgcagaacacgcgcggcttcgtgtacagg
aacctggcctgcctggtcattgacgaggcggaccgcatcctggagatcgggttcgaggag
gagatgcgccagatcatcaagatcctgcccaaggagcgccagaccatgttgttcagcgcc
acccagaccaccaaggttgaggacctggcgcgcatctccttcaagcacaagccgctgtac
gtgggcgtggacgacggccgctcggtggccacgcgtgaggggctggagcagggctattgc
gtggtgcccgccgacaagaagttcctgttgctgttcaccttcctcaagaagaacctcaac
aagaaggtgatggttttcttcagcagctgcaacagcgtcaagttccacgccgagctcctc
aactacatcgacatccccgtcaaggacatccacggcaaacagaagcaacagaagcgcaca
accacattcttcgagttctgccaggccgagaagggcatcctgctgtgcacggacgtggcg
gctcgcggcctggacatcccggccgtggactggatcatccagttcgacccgcccgacgac
ccgcgcgagtacatccaccgcgtgggccgaaccgcgcgcgggcaggcgggtcgcgggcgg
gcgctgctgctgctgctgcccgaggagctgggcttcctcaagtacctcaaggacgccaag
gtgcccctgaacgagtacgacttccccacctccaagcttgccaacgtgcagtcgcagctg
gagcggctggtggagaagaactactacctgcaccagtccgccaaggacgccttccgctcc
acgctgctcgcctacaacagccacagcctgaaggagatcttcaacgtgcaccgcctggac
ctacaagccatggcccgctccttcggcttctcggtgccgccgcgcgtgaaccttcagctg
gagtcgcacagcagccacacgcgcaaggcggccaagggcgcccccggcggcaaggcggac
taccggcgcgggctgagcacggggcacaagttcagcgcggccaatccgcacggcaggcgc
gaggcgggcgacaagcggcagttcgtgcgcatctga
DBGET
integrated database retrieval system
