KEGG   Chlamydomonas reinhardtii: CHLRE_07g325716v5
Entry
CHLRE_07g325716v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03030  DNA replication
cre03410  Base excision repair
cre03420  Nucleotide excision repair
cre03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHLRE_07g325716v5
   03410 Base excision repair
    CHLRE_07g325716v5
   03420 Nucleotide excision repair
    CHLRE_07g325716v5
   03430 Mismatch repair
    CHLRE_07g325716v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cre03032]
    CHLRE_07g325716v5
   03400 DNA repair and recombination proteins [BR:cre03400]
    CHLRE_07g325716v5
Enzymes [BR:cre01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CHLRE_07g325716v5
    6.5.1.6  DNA ligase (ATP or NAD+)
     CHLRE_07g325716v5
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CHLRE_07g325716v5
DNA replication proteins [BR:cre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CHLRE_07g325716v5
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CHLRE_07g325716v5
DNA repair and recombination proteins [BR:cre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CHLRE_07g325716v5
   NER (nucleotide excision repair)
    Other NER factors
     CHLRE_07g325716v5
   MMR (mismatch excision repair)
    Other MMR factors
     CHLRE_07g325716v5
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 5728431
NCBI-ProteinID: XP_042922614
UniProt: A0A2K3DJC2
LinkDB
Position
7:1735857..1743015
AA seq 973 aa
MKQKSIGAFFGGAGTKAGAKQEAVKDAKPAKPESKPKTKPEPADPASDQDNEADAASRPA
RKRLRRAVIEDDDDAALAVASKPAAAETAAPQQPTAAESELEDKDATMTDAPAATTKGAA
AAPTAAAGTPAKSAAPAEEPKADGGGPGTASKPAAPIASIFQRPAVRKAAAAAAAGGSPA
PGNAKKSGGGAGAAASPLKASASPAKAGKGAAPAGAATSTRDAAGGEEGKAAAAAASPAS
KKDKTKARAPKVEKAGEDGEEGEEAEGSEADPISDSDDDAGGDVNELLPEGAVGGGSGKK
AKAKKAAGRIKSGKGAQMEGVGTGALAAASKYKEQDISAVISWKEGQPVPYSLLANTFEA
IAGTTKRLEIVALLVSAFRAILATNPPDLLPAVYLCVNRVAPAHTGIELGIGEATLIKAM
CEATGKNEASIKKSYEEHGDLGVVVVGARSTQRTMFAPPPLTIASVLKAFQNIAQTTGTK
SGDQKRGMIVKLLVAAKGNEPGYIVRSLQAKLRIGLAEQSVLVALSHAVHLHRGGPAALK
QPDVKLAEALEAGAQVVKQAYSECPSYDVLVPALLEHGSTDLLSRCHFMPGVPVKPMLAK
ATNGVGEVLEKFTDIEFTVEYKYDGERAQVHVLDGGKTVHIFSRNAENNTPKYPDIVSRI
KGLLKPEVDSIVFDAEAVAYDPEKKKILPFQVLSTRARKDVAVDDIKVQVVLFAFDCLYL
NGQSLLHKPLTERRAALYGSLTEKEGELLYASYKTSRDVEELESFLNESVEAGTEGLIVK
TLGDTYEPSKRSSHWLKLKKDYMEGVGDTFDVVPVGAFFGKGKRTGVFGAYLLAVYDPDT
ETYQTISKLGTGFSEEQLSQLAEAMRPHTIPQPRHYYTWDESLVPDVWFDAAVVWEVKAA
DLSISPRHKAALGLVDPTKGISIRFPRLIRVRDDKSPEDATSAAQVADMFRNQAVIRQQK
AQDNQAGDEGEDE
NT seq 2922 nt   +upstreamnt  +downstreamnt
atgaagcaaaaaagcatcggagctttctttggtggcgctgggacgaaggcgggagcgaag
caggaggcagtgaaggacgcgaagcctgcgaagccggagagcaagcccaaaacaaagccg
gagccagccgacccggccagcgaccaggacaatgaagctgatgccgccagccggccagct
cgcaagcgcctgcggcgcgcagtaattgaggacgacgacgacgcggctctcgccgtggca
tccaagccggcagcagcagagacagctgcgcctcagcagcccacagctgccgagtcggag
ctagaggacaaggatgcgaccatgacggatgcacctgctgcaactactaagggagccgca
gccgcacctacggcagcggcgggcacgccagccaagtcggctgcgccagccgaggagcca
aaggctgatggcggtggcccaggcacagccagcaagcctgcggcccccatcgcctccatc
ttccagcgccctgccgtgcgcaaggctgccgcggcggccgcggcgggcggcagcccggca
ccgggcaacgccaagaagtcaggtggcggcgccggcgctgccgcgtctcctttgaaggcc
tcggcgtcacccgccaaggccggcaagggcgcggcccctgcgggcgcggccaccagcacc
agggatgcggccggcggcgaggagggcaaggcggcggcggcggcagctagccctgccagc
aagaaggataagaccaaggccagggcgccgaaggtggagaaggcgggagaagacggggag
gagggcgaggaggcggaggggtcggaggcggaccccatcagcgacagcgacgacgacgcg
ggcggcgacgtgaatgagctgctgcctgagggcgctgtgggcggcggcagcggaaagaag
gcgaaggcgaaaaaggccgcgggccgcatcaagtccggcaagggcgcgcagatggaaggc
gtgggcactggcgcactggccgccgcctccaagtacaaggagcaggacatcagcgccgtg
atcagctggaaggaggggcagccggtgccgtactcgctgttggccaacacattcgaggcc
attgccggcaccaccaagcgcctggagatcgtggccctcttggtgtcggccttccgagcc
atcctggccaccaacccgcccgacctgctgcccgccgtgtacctgtgcgtcaaccgcgtg
gcgcccgcgcacaccggcatcgagctgggcatcggcgaggccacactcatcaaggcgatg
tgcgaggctacgggcaagaacgaggccagcatcaagaagtcgtacgaggagcacggcgac
ctgggcgtggtggtggtgggcgcgcgcagcacgcagcgcaccatgtttgcgccgccgccg
ctcaccatcgccagcgttctcaaggccttccagaacatcgcgcagacgaccggcaccaaa
tctggtgaccagaagcgcggcatgattgtcaagctgctggtggcggccaaaggcaacgag
cccggatacattgtgcgctcgctgcaggccaagctccgcatcggcctggctgagcagtct
gtgcttgtggcgctgtcacacgccgtgcacctccaccgcggcgggccggcggcgctgaag
cagccggatgtgaagctggcggaggcgctggaggccggggcgcaggtggtgaagcaggcc
tacagcgagtgcccgtcatacgacgtgctggtgcctgcgctgttggagcacggctcgacg
gacctgcttagtcgctgccacttcatgccgggtgtgcccgtgaagcccatgctggccaag
gccaccaatggcgtgggcgaggtgctggagaagttcacggacattgagttcacggtggag
tacaagtacgacggcgagcgggcgcaggtgcacgtgctggacggcggcaagaccgtgcac
atcttcagccgcaacgccgagaacaacacgcccaaatacccggacatcgtgtcacgcatc
aaggggctgctcaagcccgaggtggactccatcgtgtttgacgccgaagccgtggcgtac
gacccagagaagaagaagatcctgcccttccaggtgctgtccacacgcgcgcggaaggac
gtggctgtggacgacatcaaggtgcaagtggtgctgttcgccttcgactgtctctacctc
aacggccagtcgctgctgcacaagccgctgacggagcggcgcgcggcgctgtatgggtct
ctgactgagaaggagggcgagctgctgtacgccagctacaagaccagccgggatgtggag
gagctggagagcttcttgaatgagtctgtggaggcgggcacggagggcctgatcgtcaag
acgctgggtgacacgtacgagccctccaagcgctccagccactggctcaaactcaagaag
gactacatggagggtgtgggcgacacgttcgatgtggtgcccgtgggcgcctttttcggc
aagggcaagcggacaggcgtgttcggcgcctacctgctcgccgtgtacgacccggacacc
gagacctaccagaccatctccaagctgggcaccggcttcagcgaggagcagctcagccag
ctggcagaggccatgcgcccacacaccatcccgcagccgcgacactactacacctgggac
gagagtctggtgccggacgtgtggttcgatgcggcggtggtgtgggaggtgaaggcggcg
gacctgtccatcagcccgcggcataaggcggcgctgggcctggtggacccgaccaagggc
atcagcatacgcttcccccgcctgatccgggttcgtgacgacaagtcaccggaggacgcc
accagtgcggcgcaggtggccgacatgttccgcaaccaggcagtcatacggcagcagaag
gcacaggacaaccaggctggcgatgagggcgaggacgagtaa

DBGET integrated database retrieval system