Chlamydomonas reinhardtii: CHLRE_07g328250v5
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Entry
CHLRE_07g328250v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K17943
pumilio RNA-binding family
Organism
cre
Chlamydomonas reinhardtii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
FANCF
Motif
Other DBs
NCBI-GeneID:
66054042
NCBI-ProteinID:
XP_042922707
UniProt:
A0A2K3DJQ1
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Position
7:2355314..2365166
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AA seq
1900 aa
AA seq
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MLEAGIAFGLGSSCCSGSEETPARETSRCCHGGAAAVAAVTKQTASTPPTAVAAAAVQAA
AAAESDAAAYVCACTVTANSSGSDGDQTNGGSSPRKRLAADGSSSANNNNNNNGSAGSAP
DAARALRHLLLPLAAQLELPPSAGSATAATITTMAPPPQSPTAGPDPPQPQQQPVAERLQ
RLPSPPSPVPTPTRAPPSPPRPQTPPVSPAPGERTAATNSCSGEDGGGGGSSYSGVQQAP
PSPSDSAAPLALAQQLQPPAGPATAHQQQPQQQPGAAVASAQPAGEGCSGRSDGGSSSGA
TAAAVSQSEGEVPVPAEPAVPSANLDVNAHTNAHTAVAKAAAGAATPPEAAAAGAAPATP
PGGITAAAAALLAPGQFQRYYSRMCDAHAEALAAELAAAAAAAAAADMSPPPPPPPLMLP
QQQLQLLSPHAAGYPPFPAAAPQQHAPPFQSHTLPQPQPPPPPHHLHHPLHYGGSPLLAR
GGHNGYNGNPNHHNHLGGGGGGPCWTSLDEWRQRHLLEIEAMQGIVPGPVADNRSTNRHN
HHHHNHLQPPTNLFGGYSGAGGGGGVGGESYSRPPPWQQQQQQQQHYLLQQHPLSPDPRH
LSLPPPPPPPPPPPQHYAAEALPAAGRHPNHPNHHHQSGDQQPNNRGVDNGGTGGGAAGL
SPAGRMLTRFFSQRTGAGGDGFGGPAPEEEEAATATAAITADGGVGGGATAGTASELGSG
DNGGGGSGGSASRRSDEGPLPCPDAFATAAAAAAAAAAAAADAAAETAADVADQPPPRSH
SPPPSGLLRFDGSQREHMSPQPHTQPPSVIGSNPMSSSVYGGGYGGGGHAALPYQMSYDS
LVLEGGSYGGGEGGFGGFLPAFASVPEGLGLFGAGGGYSRTGAGGASATAGGAAGGGGDL
LLPMGLGGGGPYDISPYGTPPMSYTSGGGGVGGGGGGFQAFGATPPSPPSRLLAWGNSAP
AGGGGTIGPFGSLGGADGGGGFGGGGGGGGRSGNGHSLYTGGGVKGISGGGGGGFGVSGG
GSCGSGGAGGGMGVGGGGGGCVRLESLFGRLTALSCDQQGSRVVQRLLGSAASEQVGRCL
DELLPSVYDTSCHPYGNYVLQQLMAVGGARHKLRLCGALSGRIRELSFDPYGCRVVQKLL
EVVPEPQAAAAVAELDGTVMRCVRDKCAHHVLRAALHHVPHSRQTFLVDTLQSALPALAR
HPYGCRLVQSLLQTTSEPERWEVIARDLLQDAPQLGGHEYGNYVMQTLAQVAAPHVRSAL
AAALAPHAVRLACCRHGSPVLEAVLKYGSEGDREVLLAALLGPTTAGGGGGCSVGSGSPY
GSNGGAGGWPFEIGGGEGGGGAAAGAIAAAAAGVGSGGGGGGVSGGGSGSGSGSSSCSRA
LRLACDPFGNYVLQRCFQVCSPGQAARLAAALLPAIPELSARCAASHHPGMAALLARLQE
MTPDPGQLHLQQQLQRQQQDPNHQQDEHYQQLQLQLQQHLGSSSYPLSPHVHLQHLQPPA
TPPHPPSPVFGGGALPPPPYAQHSFGGGGGGGVSPFGMPGAGAAMFGSSMMGATADNRYF
GGVASDGGSGSLDLSVLLSKLSQEEQRQLLLQLQPPSSLFGSSGSDAAAALYGYDSVASV
GGVAATAASAAAAGNLADGGSSSGVTALEVGSRRYCRNSTSSFGSSSTAAAERASGAAAT
ATITAGDASPPPSDQASSGAPANAAATAAAGPAKVPESEAAVAAAAAVAVAAAARALSLE
EWALVAAIGGSSNGGPDASGGALAAATAASGLRSPMPLLPAAVWAHHIPGAELAGGGDSS
TSAKRPHGQHPTTAEAAAATAAVAAGGDGWSRLLLRTLSRVASGGGGSGGNKAVGGAAGG
GEAAVDELSEYPEDAVLTEDSVAAALRALGLAPVGSGRQR
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggctggcatagcgtttgggctcggctctagctgctgcagtggctccgaggaa
acgcccgcgcgggagacgagcaggtgttgccacggcggtgcagcagcagtagcagcagta
accaagcagaccgcatcgacgccaccaacggcagtagcagcggcggcggttcaagcagca
gcagcggccgagagcgacgcggccgcgtacgtttgcgcctgcaccgtcaccgccaactcc
agcggcagcgacggcgaccaaaccaacggcggcagcagcccgcgcaaaaggctggcagcg
gacggcagtagcagcgccaacaacaacaacaacaacaacggcagcgcgggctcggcgccg
gacgcggccagagccctccgccacctgctactgccgctggccgcgcaactggagctgccg
ccctcagcgggctctgctacagccgccaccataaccacgatggcgcctccgccccagtcg
ccaacagcagggccagacccacctcagcctcagcagcagccagtagccgagcggctgcag
cgcctgccctcaccgcccagccccgtgccaacgcccacacgtgcgccgccgtcgccgccg
cggccccaaacgccccctgtgtcgcccgcgcctggagagcgcacggcggcgacgaacagc
tgcagcggtgaggatggcggcggcggcggcagtagctacagcggtgtccagcaggcgccg
ccgagcccgtccgattcggccgcaccgctggcgcttgcccagcagctacagccccctgct
ggccctgctacagcccaccagcagcagccccagcagcagccgggggcggcggtcgcatca
gcgcagcctgctggtgaaggctgtagcggacgcagcgacggtggcagtagcagcggagcc
acggcggcggccgtgtcacagtccgagggggaggtgcccgtacccgctgagccggctgtg
ccctccgcaaacctcgacgtcaacgcccacaccaacgcccacaccgccgtcgccaaagcc
gcagccggagcagcgacgccgccagaagcggcggcagcgggtgcggcgcccgcgacgcct
ccaggcggcatcacggccgccgccgccgcgctgctggccccgggtcagttccagcgctac
tacagccgcatgtgcgacgcacacgcggaggcgctggcggcggagctggcggcggcggcg
gcggcggcggcggcggcggacatgtcgcctccaccgccaccgccgccactgatgttaccg
cagcaacagctgcagctgttgagcccccatgccgccggctacccgccgttccccgctgca
gccccgcagcagcacgcaccgcccttccagtcccacaccctcccacaaccccagccgccg
ccgccgcctcaccacctgcaccacccgctgcactacggcggcagccctctgctggctcgc
ggcggccataacggttacaacggcaatcccaaccaccacaaccacctcggcggcggcggt
ggcggcccctgctggacgtcactggacgagtggcgacagcggcacctgttggagatcgag
gccatgcagggcatcgtgccgggaccggtagccgacaaccgcagcaccaaccgccacaac
caccaccatcacaaccaccttcagccgccaaccaacctctttggcggctacagcggcgcc
ggtggcggcggcggtgttggcggtgagagctacagccgtccgccgccgtggcagcagcag
cagcagcagcagcagcactacctgctacagcagcatccactgtcacccgacccccggcac
ctttcgctgccgccgccacctccaccgccgccgccgccgccacaacactacgcggctgag
gcattgccggcggcggggcggcaccccaaccaccccaaccaccaccatcagtccggtgat
cagcagcccaacaaccgcggcgttgataatggcggcacaggcggcggcgcagcgggcctg
agccccgcgggccgcatgctcactcggttcttcagtcagcgcaccggtgccggcggcgac
ggctttggcggccctgctcccgaagaggaggaggctgctactgccaccgccgccattact
gcagacggcggtgttggtggtggtgctactgccgggacagcgtctgagctgggtagcggc
gacaacggcggcggcggcagtggcggcagcgcaagccggcgcagcgatgaggggccgctg
ccatgtcctgacgccttcgccacagcggcggcggcggcggcggcggcagcggcggcggcg
gctgacgctgccgccgagactgctgctgatgttgccgaccagccgccgccgcgctcgcac
tcgccgccgccgtcgggcctgctgcgcttcgacggcagccagcgcgagcacatgtcgccg
cagccgcacacccagccgccgtcagtcatcggcagcaaccccatgtcatcgtcagtgtac
ggcggcggttatggcggcggcggccatgccgcactgccgtaccagatgtcgtacgactct
ctggtgctggagggcggcagttacggcggcggcgaaggcggttttggcggtttcctgccc
gcctttgcctctgtgcccgaaggcctgggcctcttcggcgccggcggtggttacagccgc
actggcgccggcggcgccagtgctacagccggcggcgcggctggtggcggcggcgacctg
ctgctgccgatgggcctcggtggcggcggcccgtacgacatctcgccgtacggcacgccg
cccatgtcttacaccagtggcggcggtggcgttggtggcggcggcggcggtttccaggcc
tttggcgccacgccgccgtcgccgccgtcgcggctgctggcgtggggcaactcggcgcct
gccggcggcggcggcaccatcgggcccttcggcagtcttggcggcgcagacggcggcggc
ggtttcggtggcggcggcggcggcggaggccgcagcggcaacgggcacagcctgtacact
ggtggcggtgtgaagggtatcagtggtggcggcggcggcggctttggcgtcagcggcggc
ggcagctgcggcagcggcggcgctggcggcggcatgggtgtcggcggcggcggcggcggc
tgtgtacggctggagtcgctgtttgggcggttgacggccctgagctgcgaccagcagggc
agtcgggtggtgcagaggctgttgggcagtgccgccagcgagcaggtgggccgctgcctg
gacgagctgctgccgtcagtgtacgacacctcctgccacccgtacggcaactacgtgctg
cagcagttgatggcggttggcggcgcccgccacaagctgcggctgtgcggtgcgctgtcc
ggccgcatccgggagctgtcgttcgacccgtacggctgccgggtggtgcagaagctgctg
gaggtggtgcctgagcctcaggcggcggcggcggtggcggagctggacggcacagtcatg
cgctgcgtgcgggacaagtgcgcgcatcacgtgttgcgggcggcgctgcaccacgtgccc
cacagccgccagacattcctggtggacacactgcagtctgcgctgcctgccctggcgcgc
cacccctacggctgccgactggtgcagtcgctgctgcagaccaccagcgagcccgagcgc
tgggaggtcatcgccagagacctactgcaggacgcgccgcagctgggcggtcacgagtac
ggcaattacgtgatgcaaacgctggcgcaggtggcggcgccgcacgtgcgttccgcactg
gcggcggccctggcgccgcatgccgtacggctggcgtgctgccgccacggcagccccgta
ctggaggccgtactcaagtacggcagcgagggcgaccgcgaggtactgctggcggcgctg
ctgggaccaaccaccgccggtggcggcggcggttgttccgttggatccggcagcccgtac
ggcagtaacggcggcgccggcggctggccgtttgagattggcggcggagagggcggcggc
ggcgcggctgcgggcgccattgcggctgcggctgcgggtgttgggagtggaggaggaggg
ggcggcgtcagtggcggcgggagcggcagtggcagcggcagcagtagctgcagccgggct
ctgcggctggcgtgcgatccctttgggaattacgtgctgcagcgctgcttccaggtgtgc
agtcccggccaggccgcccggctggctgcggcgctgctgcccgccatccccgagctgtcc
gcgcgctgtgccgccagccaccacccaggcatggccgcactgctagccagactgcaggag
atgacgcccgaccccggccagctgcacctgcagcagcagctgcaacgccaacagcaggac
ccgaaccaccagcaagacgaacactaccagcagctacagctacagctacagcagcacctc
ggcagtagcagctaccccctgtccccccacgtgcacctgcagcacctgcagccgccggcg
acgccgccgcacccgccgtcgccagtgtttggcggcggcgcgttgccgccgccgccgtac
gcccagcactctttcggcggtggtggcggcggcggcgtctctccattcggcatgccgggc
gcaggcgcggccatgtttggcagtagcatgatgggtgctacagctgataacaggtacttt
ggcggcgtcgccagcgatggcggcagtggcagtctggacctgtcagtactcctgtcgaag
ctgtcgcaggaggagcagcggcagctgctgctgcagctacagccgcccagcagcctgttc
ggcagtagcggcagcgacgcggccgcggcgttgtacgggtacgacagcgtggccagtgtg
ggaggagtggctgctactgcggcgtcagcagcggcggcggggaatttggcagatggcggc
agtagcagcggcgtcactgcgctggaggtgggcagcaggcgctactgccgcaatagcacc
agcagcttcggcagtagcagcaccgccgctgccgagcgcgccagcggcgccgctgctact
gccaccatcacggcaggcgacgcctctccgccgccctccgaccaagccagcagcggcgcc
cccgccaacgccgctgctacagccgccgccggcccagccaaggtgcccgagagcgaggcg
gcagtagcagcggctgcagccgtggctgtagcagcggcggcccgggccctcagcctggag
gagtgggccctggtggcggcaattggcggcagtagcaacggcggccccgacgcctccggc
ggcgccctcgcggcggctacagctgcttcgggcctgcgctctcctatgcctttgctgcct
gccgctgtctgggcccaccacattcctggggcagaactggcaggtggcggagatagcagc
acatcagccaagcggccacacggccagcacccaacgacggcggaggctgcagcagccaca
gcggcagtagcagcaggaggcgacggctggagccggctgctgctgcgcacgctgagccgc
gtggcgagcggcggcggcggcagtggcggcaacaaggctgtaggtggggcggcgggtggt
ggggaggcggcggttgatgagctgtccgaataccccgaggatgcggtgctcacggaagac
tcggtggcggcggcgctgagggctctgggcctggcgcccgtgggcagcggccgacagcgc
tag
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