Chlamydomonas reinhardtii: CHLRE_07g328550v5
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Entry
CHLRE_07g328550v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre04142
Lysosome biogenesis
cre04145
Phagocytosis
cre04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
CHLRE_07g328550v5
04142 Lysosome biogenesis
CHLRE_07g328550v5
04148 Efferocytosis
CHLRE_07g328550v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cre04131
]
CHLRE_07g328550v5
Membrane trafficking [BR:
cre04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
CHLRE_07g328550v5
Hops complex
CHLRE_07g328550v5
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS18_solenoid_2nd
Pep3_Vps18
VPS18_solenoid_1st
P23-45_gp39_N
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
5716214
NCBI-ProteinID:
XP_042922711
UniProt:
A0A2K3DJP5
LinkDB
All DBs
Position
7
Genome browser
AA seq
1298 aa
AA seq
DB search
MDLVEAFGARNTGPGYGAEVIERLESGASGDLVIIDAPSNGAGGSEAPQLFIDTAIRQAS
RGRGAVTCVTASNDVVLVATARGYLLRYSWDENGNERVAEVEVVPAKQQADHRIAHLFMD
PWANHVLIAVRAGGGAGGGGGGGGGGGGGGGGGGGGGGGGTAEVHYVHRRWPRARLLSEF
KGHSALTAVGWCMQQGDDSAPPAPAGGSRGPASVAGSAAGESCTGVILLGTEAGSLLEAA
LDERTKPGREAPPRTLIEAPGAAAAAGGGGGGGGGKDRRGAAGGGAAGGGAGSAAGAAAF
TSLYQIAMPSGRHGLLAATPSHLRIWVAPSTSATSSSAASSPWQALFLQGHAGSVRGGSA
AAGGGGGGGPPPPLAVLEAVAPSPYSQLQLYWPIDISELPSRFAWLVGGVVYHGDLDWEA
AAAAAEAAEAAAANGAGPAAAAAAAAVAGGADALSGVVSLPLEGAGAGDDAGSARSLVVT
EYHLLLLAGDRLRAVNRVSGRTVAARAFRSPITRSLTGEHAREIDGLVRDPVSGTAYMAS
DEALYEVALTHEAAGMWRVYLELQDWDAALRCCSGPAQRDEVHRARAEAAVAASDWRTAA
VNFAKVSDGRPPFEDVALMLADCGDTAALPAFLTTRLATLAAIAGAGGAGSAVVQGAFGG
RPAPPLPLPLPSPSASTSGAAAPASASTLALLSPQTSALLAGGAALGGGAAAGGAAGGVG
SNPHGPERAQCTLLAAWLTELHLDAINRALLEAGGESGEAYLAAAAALRAHLSDWVHVMD
PGTTVSLLSSYGRLEELLQLAQLRGDHEGLVEQLLARPPPAGALRALAVLRSPVVSRELV
YRFAPGLVAAAPEEAVDFFIAERPPLDPRRLLPALLRYGDPGSGARQAAARRHVLRYVEF
AIEALGCTDSVVHNLAVALYSLAPGEEGEAALLRYLTRGGRYGGVTPLYDSGYALRLAQE
CSKPRAAVRLMCQLGMYPDAVRAALALDLGLAKSLAAEPDQDDALRRKLWLQVARHVVEH
GSRAAAAAAAATAATAASGANGAANGSTASANGAAAAAKGSESTAGTAAADAADAAAAAD
PTTSHIRTAVEFLREADGLLRIEDILPFFPDFVTIDNFQAAICDSLERYGSAIESLKSDM
EEATAIAEALRADIRQLAARSAVVSLGQPCTRCGRPISEPAPLTSLPQGGALPPFYVFPT
GCAYHVACCAAEVTELVAPAQRKRIHTLMARLSRVRPGATTCPAYAGAPAAPVAELQEAL
AAEVGHEDPRNGELAVRLLEAPFVLEAADRAEADSWAI
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtcgaggcattcggggctcgcaacaccgggcctgggtatggcgccgaggtc
atagagcggctggagagcggagcatcgggtgacctggtcattatagatgcgccatccaat
ggagctgggggcagcgaggctccgcagctgttcatcgacacggccatccgccaggcctcc
aggggccgcggtgccgtgacgtgcgtgacggcctccaacgacgtggtgcttgtggccaca
gcacgcggctacctgctgcgctacagctgggatgagaacggcaacgagcgggttgcggag
gtggaggtggtgccggccaagcagcaggccgaccaccgcatcgcacacctgttcatggac
ccatgggccaaccatgtgctcatagccgtgcgggccggaggaggagcaggcggaggagga
ggaggaggaggaggtggagggggcgggggaggcgggggaggtggaggcggcggcggcggc
acggcggaggtgcattacgtgcacaggcgctggcctcgcgcccggctgctgtcggagttc
aagggacactcggcgctgacggccgtgggttggtgcatgcagcagggcgatgactcggcg
ccgccggcaccggcgggcggcagtcgcgggccggcgtccgtggcgggcagcgcggcgggc
gagagctgcacgggggtcatcctgcttggcacggaggcgggctccctactggaggcggcg
ctggacgagcggaccaagcccgggcgggaggcgccgccgcggacacttatcgaggcaccg
ggcgcggcggcagcagcgggcggcggcggaggcggaggcggaggcaaggaccgccgaggt
gcggccggcggcggcgcggccggcggcggcgcgggctctgccgccggcgccgccgccttc
accagcctgtaccagatcgccatgccgtccggccgccacggcctgttggctgctactccc
tcccacctccgcatctgggtcgcaccctccacctccgccacctcctcctccgctgcctcc
tcgccttggcaagcgctcttcctgcaaggccacgccggcagcgtgcgcggcggctccgcc
gccgcaggcggcggcggcggcggcgggccgccgccgccactcgccgtacttgaggctgta
gctccgtctccgtacagtcagctacagctgtactggccgatcgacatctcggagcttccc
tccaggtttgcctggctggtgggcggggtggtgtatcacggcgacctggattgggaggcg
gcggcggcggccgcggaggcggccgaggcggcggcggcgaacggcgccggcccggcggcg
gcggcggcggccgcggcagtagcgggcggcgcagacgcgctgtcgggggtcgtgagcttg
ccgctggagggcgcgggcgccggagacgacgccggctccgcccgctcgctggtggtgacg
gagtaccacctgctgctgctggcgggcgatcggttgagggccgtgaaccgagtcagtggt
cgcaccgtggcggcgcgggcgttcaggagccccatcacacgcagcctgacgggggagcac
gcgcgggagattgacggcctggtgcgcgaccctgtgtccggcactgcctacatggcgtcc
gacgaggcactgtatgaggtggcgctcacacacgaggcggcgggcatgtggcgcgtgtac
ttggagctgcaggactgggacgctgcgctgcgctgctgctccggccccgcacagcgagac
gaggtgcatcgggcgcgggcggaggcggcggtggcggcgagtgactggcgcaccgcggcc
gtgaacttcgccaaggtgtcggacgggcggccgccgtttgaggacgtggcgctgatgctg
gcggactgcggcgacacggccgcgctgcccgccttcctcaccacacgcctcgccacactg
gctgccatagccggagccggaggcgccggcagcgccgtggtgcagggcgcctttggcggc
cgacccgcgccgcccctgcccctgcccctgccctccccctccgctagcaccagcggcgca
gccgcccccgcctccgcctccacgctagcgctgctctcgccacaaacgagcgcgctgctt
gcgggcggcgccgcgctcggcggcggcgccgccgccgggggggcggccgggggtgtcggc
agcaacccgcacggtcctgagcgggcccagtgcacgctgcttgcggcctggctgacggag
ctgcacctggacgccatcaacagagccctgctggaggcgggcggcgagtcgggcgaggcg
tatctggcggcggcggcggctctgagggcgcacctcagcgactgggtgcacgtcatggac
ccaggcaccacggtgtctctgctgtccagctatgggcggctggaggagctgctgcagctg
gcgcagctgcggggcgaccacgagggactggtggagcagctgttggccaggccgccgccg
gcgggggcgctcagggctctggcggtgttgcgctcgcctgtggtgagtcgcgagctggtg
taccgcttcgcgccggggctggtggcggcggcgccggaggaggccgtggacttcttcatc
gcagagcggccgcccctggacccgcggcggctgctgccggcgctgctgcggtacggcgac
ccgggctcgggggcgcggcaggcggcggcgcggcggcacgtgctgcggtatgtggagttt
gccatcgaggcgctgggctgtacggacagtgtggtgcacaacctggctgtggcgttgtac
agcctggcccccggcgaggagggcgaggccgcgctgctgcgctacctcacccgcggcggc
cgctacggcggcgtgacgccgctgtacgacagcggctacgcgctgcggctggctcaggag
tgcagcaagccacgggcggcggtgcggctcatgtgccagctgggcatgtaccctgacgcg
gtgcgggcggccctggcactggacctgggactggccaagagcctggcggccgagcccgac
caggacgacgccctgcggcgcaagctgtggttgcaggtggcccgacacgtggtggagcac
ggcagccgcgccgcggcggcggcagccgccgcaaccgccgcaaccgccgccagcggcgcc
aacggcgccgccaacggttctacagcttctgccaacggtgccgctgctgctgctaagggc
tccgagagcactgccggcactgccgctgctgacgccgctgacgccgccgccgccgccgac
cccaccaccagccacatccgcaccgcggtggagttccttcgcgaggccgacggcctgctg
cgcattgaggacatcctgcccttcttcccggactttgtcaccatcgacaacttccaggcc
gccatctgcgacagcctggagcgctacggctccgccattgagtcgctcaagtcggacatg
gaggaggccacagccattgcggaggcgctgcgggcagacatacggcagctggcggccagg
tctgctgtggtgtctctgggccagccctgcacgcgctgcgggcggcccatcagtgagccg
gcgccgctcaccagcctgccgcagggcggcgcgctgccccccttctacgtgttccccacc
ggctgcgcctaccacgtggcctgctgcgccgccgaggtcacggagctggtggcgccggcg
cagcggaagagaatccacacgctcatggctcgtctgtcccgagtgcgcccgggcgccacc
acctgccccgcatacgccggagcgcccgccgcccccgtggccgagctgcaggaggctctg
gctgcggaggtgggtcatgaggacccgcgcaacggcgagctggcggttcgactgctggag
gcgcccttcgtgctggaggcggcggaccgtgcggaggcggacagctgggccatatga
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