KEGG   Chlamydomonas reinhardtii: CHLRE_07g342352v5
Entry
CHLRE_07g342352v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03020  RNA polymerase
cre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CHLRE_07g342352v5
  09124 Replication and repair
   03420 Nucleotide excision repair
    CHLRE_07g342352v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cre03021]
    CHLRE_07g342352v5
   03400 DNA repair and recombination proteins [BR:cre03400]
    CHLRE_07g342352v5
Transcription machinery [BR:cre03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CHLRE_07g342352v5
  RNA polymerase III system
   RNA polymerase III
     CHLRE_07g342352v5
  RNA polymerase I system
   RNA polymerase I
     CHLRE_07g342352v5
DNA repair and recombination proteins [BR:cre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CHLRE_07g342352v5
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 Zn_ribbon_LysW Zn_Ribbon_YjdM Prok-RING_1 C1_1 Zn_ribbon_3 Zn_ribbon_13 DUF1451 DZR Zn_ribbon_NUD At4g08330 A2L_zn_ribbon DUF5816 Zn_ribbon_DZR_6 HypA
Other DBs
NCBI-GeneID: 5717990
NCBI-ProteinID: XP_001692523
UniProt: A8ITN4
LinkDB
Position
7:complement(4192022..4193320)
AA seq 58 aa
MSGYGTMPATVTMGVPYICGQCGSEISLKPGDIIQCRECGYRILYKKRTNKVVQFEAR
NT seq 177 nt   +upstreamnt  +downstreamnt
atgagcggctacgggactatgccggcgactgtgacgatgggcgtgccctacatttgcggg
caatgcggttcagagattagtctgaagcccggcgacatcatccagtgccgtgagtgcggt
taccgcatcctgtacaagaagcggacgaacaaggtcgtgcagtttgaggcccggtaa

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