Chlamydomonas reinhardtii: CHLRE_07g351000v5
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Entry
CHLRE_07g351000v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K12821
pre-mRNA-processing factor 40
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHLRE_07g351000v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cre03041
]
CHLRE_07g351000v5
Spliceosome [BR:
cre03041
]
Complex A
U1 snRNP components
U1 related factors
CHLRE_07g351000v5
Complex B
CHLRE_07g351000v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
5718067
NCBI-ProteinID:
XP_042923130
UniProt:
A0A2K3DLB1
LinkDB
All DBs
Position
7:complement(5500716..5509378)
Genome browser
AA seq
975 aa
AA seq
DB search
MAGRGRAATLPAWMTSGSAPAPGAPGGAPVPAPSPGPGAPGAPPFGAPHGGHPPPGSHMH
SGPPSGGAGPPQHLPPPPGSGPPPGGMQGPGGQGGAPPGQGPPMQGPPGMMVRPPAPGGP
GAPPPGWQPGMGPPPPGMGFPPPGTHLPPPGMGLPPPGWQPGMGAPPPGMGLPPPPAGWH
PGMGQPPGYPPRPGFPPPGMAPPGFPSGMAPPPGMHQGMHPGMHPGMPGMPGLPLPPGGP
GGPQQQQQQQQLPAGQPPAGPGAGAPAPSSAGPAGASTPGAAGGGGAPGGPGAGVGGGGG
GPAKEWTEHTAPDGRKYYYNAKTKQSSWEKPDELLSGAEKTDAPAWKEYTAPDGRKYYYN
KATKESRWTMPEEMKAAAAGGGGGGAGAGAAPKSAGGVQVVSLTGASGAAAAAAAAPAGG
GGDSRSSPSGADGPSASAQSGEPKNYNFATKEEAKDCFKELLAAVGCRSDWSWEQAMRHI
VNDPRYSALKSLGERKQTFNEYVQARRNEEREEERRRQRQAREDFTAMLMSSDELKTTHP
FRRARELFESDARWKAVPEREREELFHDAQRERDKRDKEERRQERKRRAGAFRDLLEREG
VKQGAEWRKVSKRLEGEDEYEALDKVERLEVFQEYMKDMERREKEDKEREREERKRQERK
ARDAFKELLKKHRDEGLIGLRSRWKEYVDAAALTGEEAYRAVEANSSGSRPKELFEDVVE
DMEEEYDKSIKPFFKALLKAAPADFALTPTTTYEATEEALAAAAAGEGAEPDAATRLNSL
LPTYKRCFWEDAVAKARSREAEEAERRRRARDKLASYMRHARPVVREDSAWEQWLAEHER
EPEVRALSLDEARAVFDEVQARARRKAEAAHSDDDSGGGGGSRRRRGSRSDDEDGYDGGR
SKKSHKEKKSSKRHDRSDDDDEPVKSKKHKKDKDKDKDRERERSERAGGGSRGPPPPQPP
PPAEDSDRDSGEIRE
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgcgggagagccgccacgctgccagcatggatgaccagtgggagtgctccg
gctcctggagcgccagggggggcgccggtgccagcgccttcgcccggcccgggagctcct
ggcgcaccacccttcggtgcgccgcatggcggccaccctccgccaggctcccacatgcac
tccgggccgccaagtgggggcgccgggccgccccagcacctgccgccgccgccggggtca
gggccgccgccgggcgggatgcaggggccagggggccagggcggcgcgccgccggggcaa
gggccccccatgcaggggccgccaggaatgatggtacggccgccggcgccgggcgggcca
ggcgcgccgccaccgggttggcagccaggcatggggccgccgccaccaggcatgggcttc
ccgccgccgggcacgcacctgccgccgccgggcatgggcctgccgccgccaggctggcag
ccgggcatgggggcgccgccgccgggtatggggctgccgccgccgccggcgggttggcac
ccaggcatggggcagccgccgggctacccaccacggcccggctttcctcctcccggcatg
gcgcctccgggctttccttcgggcatggcgccgccgccgggaatgcaccagggaatgcac
ccgggaatgcacccgggaatgcccggaatgccggggctgccgctgccaccgggcggtcca
ggcggcccgcagcagcagcagcagcagcagcagctgccggcgggtcagccgccggctggc
cccggcgcgggcgcgcccgcgccctcctccgcaggccctgcgggcgcctccacaccgggg
gctgctgggggcggcggagcccccggggggcctggggcgggggtggggggcggcggcggc
ggtcccgccaaggagtggacggagcacacggcgcctgacggccgcaagtactactacaac
gccaagaccaagcagagtagctgggagaagccggacgagctgctgagcggggcggagaag
acggacgcgccggcctggaaggagtacacggctccggacgggcgcaagtactactacaac
aaggcaaccaaggagagcaggtggaccatgcccgaggaaatgaaggcggcggcggcggga
ggtggtggcggcggcgcgggtgccggcgccgcgcccaagtctgctggcggtgtgcaggtg
gtgtcgttgacgggggcgagtggcgcagcagcggcggcagccgcggctccggcgggcggc
ggcggcgacagccggtcttcgccgtcgggcgcggacggtccgtcggcgtcggctcagtcg
ggcgagcctaagaactacaactttgcaacgaaggaggaggccaaggactgtttcaaggag
ctgctggcggcggtgggctgccgcagcgactggagctgggagcaggccatgaggcacatc
gtcaacgatccgcgctactccgcgctcaagtccctgggcgagcgcaagcagaccttcaac
gagtacgtgcaggcgcgccgcaacgaggagcgagaggaggagcggcggcggcagcgccag
gcgcgggaggacttcacggccatgctcatgtccagtgacgagctcaagaccacgcacccc
ttccgccgcgcgcgcgagctgtttgagtcggacgcccgctggaaggcggtgccggagcgc
gagcgcgaggagctgtttcacgacgcacagagggagcgcgacaagcgggacaaggaggag
cgccgccaggagcgcaagcggcgtgcgggcgccttccgtgacctcctcgaacgcgaggga
gtcaaacagggcgccgagtggaggaaggtgtcgaagcggcttgagggcgaggacgagtac
gaggcgctggacaaggtggagcggctggaggtgttccaggagtacatgaaggacatggag
cggcgcgagaaggaggacaaggagcgcgagcgcgaggagcgcaagcggcaggagcgcaag
gcgcgagacgcgtttaaggagctgctgaagaagcacagggatgagggcctgatcggactg
cgcagccgctggaaggagtacgtggacgccgccgcactgaccggcgaggaggcctaccgg
gcggtggaggccaacagcagcggcagcaggcccaaggagctgtttgaggatgtggtggag
gacatggaggaggagtacgacaagagcatcaagcccttcttcaaggcgctgctgaaggcc
gcgcccgccgacttcgcgctcacgcccaccaccacctacgaggccaccgaggaggcgctg
gcggcggcggcggcgggggagggcgccgagcccgacgctgccacccgcctcaacagcctg
ctgcccacctacaagcgctgcttctgggaggacgcggtggccaaggcgcgcagccgcgag
gccgaggaggcggagcggcggcggcgcgcgcgcgacaagctggccagctacatgcggcac
gcgcggccggtggtgcgcgaggacagcgcctgggagcagtggctggcggagcacgagcgc
gagccggaggtccgggcgctgtcgctggatgaggcccgcgcggtgtttgatgaggtgcag
gcgcgcgcgcgccgcaaggccgaggccgcgcacagcgacgacgacagcggcggcggcggc
ggcagccggcggcggcgcggcagccgcagtgacgatgaggacggctatgacggcgggcgc
agcaagaagagccacaaggagaaaaagagctccaagcggcacgaccgcagcgacgacgac
gatgagccggtcaagtccaagaagcacaagaaggacaaagacaaggacaaggacagagag
cgggagcgctcggagcgcgccggcggaggcagccgcggcccgccgccgccacagccgccg
ccgccggctgaggattcggatcgtgacagcggcgagatccgggagtga
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