Chlamydomonas reinhardtii: CHLRE_08g372500v5
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Entry
CHLRE_08g372500v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K11373
elongator complex protein 1
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cre03016
]
CHLRE_08g372500v5
Transfer RNA biogenesis [BR:
cre03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
CHLRE_08g372500v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
TPR_ELP1
A-sol_ELP1
Beta-prop_ELP1_2nd
HB_ELP1
TPR_GEMI5
Beta-prop_WDR19_1st
V_ATPase_prox
Motif
Other DBs
NCBI-GeneID:
66054409
NCBI-ProteinID:
XP_042922060
UniProt:
A0A2K3DHB5
LinkDB
All DBs
Position
8:complement(2556920..2573025)
Genome browser
AA seq
1660 aa
AA seq
DB search
MKNLIVERDACALLDQTEDGAVASFCMNAAESTMYTISETGVVTCYSVGETLKFVWRVDV
GPELLAAELDADPAVAATATATAGGCGWLASFCHLLELDALCVATRGGTLALLHVAEGEQ
PHLEQVGQVDGGLVAVEWSPDGELMVALTGAGSLLVMNQAWELMLEAPALGPPAPAAATT
ATTATAAAAAASATEAAAAAVPGPRYADGAISWRGDGKFFAVVCRDAAVAAAAATEAAPP
PPYHVRIWDRTTLEPHSAGEPFDCLLPLPAWQPNGRHLYVAAAGATAAAVSAGAPAPPSA
AVAWGGDSGSSGGGSGTGSAVLMYERNGLRHGGFALPGSAPVVGLAWSCDSELLAVVNAP
HRGGGGGGDGGGGGGGGDGASASGGDEGGSGDWVVQLWHRSNWHWYLKHERRYAPAPGGA
QAAAVEAAAAGAGGRPPLLRWDEQRGGVLHVVSPAGAYEQVVLAWDTAVSDRGTAAVVDG
RRLLLSPLRQGLVPPPMCAAAVALPEAAVDVAITALPAAVPPTGAGAAAAAADEVVAVLT
SGGRLAVARAVEEDLWQETLEDQEALLAELAGAQPPAIAAAAATAAAAGRLLQPAVPHLD
VPLAGGRRARALTWLAAGAGSSSGSSSGNGVGAGIGSSSGGGGGAASLLVLAAPYPEPGL
EEGEGDVLVQVDLQWLSCGPADPTDPRPRPELLLTERPPVYAGGRVLRIAPHVAGGAAVE
LASGAVLRFVPAPPVLGPGTANTTSNNSNNNNNGSSTSSNSSAAATGRVVGCGAAAALPA
PCAVVRPLPPSSPFGQDAPPLLGLTRGGRLCWGGAVVAAADVTSFALRAYGPGGPALLYT
TRKNLLYTVLLAQLPGYTHRDLTADPASHHRNRHEGDVQAAMHAAMRPDAATAASRDVAV
RAVEQGAVLVGCPAGEPVEAAGGAAVAAGSSSSSSSSSSGWRLADVPVVLQMPRGNLEGI
SPRALVLAALAAALSRRDFAEAWRLAAVQRVDLNLLVDWGAGGGGGGWQAFAASAAAEFV
AAVPRPADLCDLLFALRPGSVLEEGGAYAGALEWLGVRRPAAAAAAAAAAQPGAAARRPG
ASTEAGKGEAGQGAEAGGGKVTGVCAAVRAAVLARPDAAKYLEVVVTSFARSDPPQLKAA
MSAIRDAKEAELVGATAAAAAATANGNGAAAATAAPGAAAAATAAGHSAADKALKHLLLY
TDADELYRTALGLYDLPLAYMVVVASPHKDPGEALAELQRFGAVRPQPLQRHAIDLHLRR
YASALRHLVAAGQQHFSQALQLARERGLLRQLLQLYDNDPEHRPAVLEAYGQQLEAAKRY
DDAAVTYLAAGAGRRALAAYRAGGRWRQLFSVAGQLGMAAEEVQALAADVVEELAGGGQA
ADAAAVLLHYLGDVDNAVRTYGNAREWREAVRVAHAHSRHDLVETVVAPAAAESASSLLT
EAGEAVEKIRKYGQRLADVRARRLAMAAALAAADEEADAAGLDFDAQSDAMSMVSGLSVY
TDATHTAPPGSAAAGGSAASSAAGGGSSRAPSTLGGRRAQGGKKKKTGASRIRQGSPMEE
ASLCAHLHSLAPRPAALSETGQLLELLVMLGHADDARALQRAVAGWQAAYEAARADMAAH
PVPVEGPPHAREEMERLLTPAPDTAGVAWKWEVLRDWGPA
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccttattgttgagcgcgatgcttgcgcgctgctggaccaaacggaggatggc
gccgtggcgagcttctgcatgaacgctgccgaatcgaccatgtacacaatctcggagacg
ggcgtggtgacgtgctactctgtgggagaaaccctcaagtttgtctggcgcgtggacgtg
gggccagagctgctggccgccgagctcgacgccgacccggcggttgcagcaaccgcaacg
gcaactgccggcggttgcggctggctggccagcttctgccaccttctggagctggacgcg
ctgtgcgtggccactcgcggcggcacgctggcgttgctgcacgtggcggagggcgagcag
ccgcacctggagcaggtggggcaggtggacggcggtctggtggcggtggagtggagtccg
gatggcgagctcatggtggcgctgacgggagccggcagtctactggtcatgaaccaggcg
tgggagctaatgctggaggcgccggcgctggggccgcccgcgcccgcagccgccacaacc
gccacaaccgccacagccgccgccgctgctgcctccgccaccgaagccgcagcagcagcc
gtccccgggccgcggtacgcggacggagccatctcgtggaggggggacgggaagttcttc
gcagtggtatgccgggatgcggctgtagccgctgcagccgcaacagaggctgcgccgccg
ccaccgtaccatgtacggatctgggatcgtacgacgctggagcctcactcggcaggcgag
cctttcgactgcctgctgccgctgcccgcctggcagccgaacggccgccacctgtacgtc
gcggcggcgggcgcaaccgccgccgccgtatcggcgggcgcgccggcgccgccgtcggcg
gctgtagcatggggcggcgacagtggcagtagcggcggcggttcagggacggggtcagcg
gtgctgatgtatgagcggaacgggctccggcacggcgggttcgcgctgccaggctcggcg
cctgtggtgggcctggcatggagctgtgactcagagctgctggcggtggtgaacgcaccc
caccgcggcggcggcggcggcggcgatggcggcggcggcggcggcggcggcgatggcgcc
agcgcaagcggcggtgacgagggcgggtcaggagactgggttgtgcagctgtggcaccgg
agcaactggcactggtacctcaaacacgagcgccgctacgcccccgcgcccggcggggcc
caggcggcggcggtcgaggcggcggcggcgggggcaggcgggcggccgccgctgctgcgg
tgggacgagcagcgcggcggcgtgttgcacgtggtcagcccggcgggcgcatacgagcag
gtggtcctggcgtgggacacggcggtgtcggaccgcggcacggcggcggtggtggacggc
cggcggctgctgctgagcccgctgcggcaggggctggtgccgccgcccatgtgcgccgcg
gcggtggcgctgcccgaggcggctgtggacgtggcaatcacagcgcttcccgccgccgtg
ccgcccaccggcgccggcgccgccgccgccgccgcggacgaagtggtggcggtgctgacc
agtggcgggcggctggcggtggctcgggcggtggaggaggacctgtggcaggagacactg
gaggaccaagaggcgctgctggccgagcttgcgggcgcacagccgcccgccatcgccgca
gcagcagctacagccgccgccgccggcaggctgctacagccggcggtgccgcacctcgac
gtgcccctggcgggcggccgccgcgcccgtgcgctgacgtggctcgccgccggtgccggc
agtagcagcggcagtagcagtggcaacggtgtcggcgccggtatcggcagtagcagtggc
ggcggcggcggcgctgcgtcgttgctggtgctggcggcgccgtacccggagccggggctg
gaggagggcgagggggacgtgctggtgcaggtggacctgcagtggctgagctgcggcccg
gccgaccccacagacccgcggccgcggcccgagctgctgctgacagagcggccgcccgtg
tacgccggcggcagggtcctgcgcatagcgccgcacgtggcgggcggggcggcggtggag
ctggccagcggggccgtgctgaggttcgtgccggcaccccccgtgctgggcccaggcacc
gccaacaccaccagcaacaacagcaacaacaacaataacggcagcagcactagcagcaat
agcagcgccgcggcgacgggtcgtgtggtcggctgcggggcggcggccgcgctgccggcc
ccctgcgccgtggtgcggccgctgccgccgtcgtcacccttcggacaggacgcgccgccg
ctgctgggcctcacgcgcggtgggcggctgtgctggggcggcgccgtggtggcggcggcg
gacgtgacctccttcgcgctgagggcgtatggccccggaggccccgcgctgctgtacacc
acacgcaagaacctgctgtacacggtgctgctggcgcagctgcccggctacacgcaccgc
gacctcacggctgacccggcctcgcaccatcgcaacaggcacgagggcgacgtgcaggcg
gccatgcacgccgccatgcgccccgacgccgccaccgccgcctcgcgcgacgtggcggtt
cgcgcggtggagcagggcgcggtgctggtgggctgccccgccggggagcccgtggaggcg
gccgggggggcggcagtagcagccggcagtagcagcagcagtagcagcagcagcagtggc
tggcggctggcggacgtgccggtggtgttgcagatgccgcgagggaacctggagggcatc
tcgccgcgtgcgctggtgctggcggcgctggctgccgccctcagccgccgcgacttcgcc
gaggcgtggcggctggcggcggtgcagcgagtggacctcaacctcctggtagactgggga
gccggaggcggcggcggcggctggcaggccttcgccgcgtcggcggcggcggagttcgtt
gcggcggtgccgcggcccgcggacctgtgtgacctgctgttcgcgctgcggccgggcagt
gtgttggaggagggcggcgcgtatgcaggcgcgctggagtggctgggcgtgcggcggccg
gcggcggcggcggcggcggcggcggcggcgcagccgggggcggcggcgcggcggcccggg
gcctcgacggaggcgggcaagggagaggcggggcagggggcggaggcgggcggcggcaag
gtgacgggcgtgtgtgcggcggtgcgggcggcggtgctggcgcggccggatgccgccaag
tacttggaggtggtggtcacctccttcgcacggagcgacccgccccagcttaaggcggcc
atgagcgccatccgcgacgccaaggaggccgagctcgtcggggctacagcagccgctgct
gctgctacagccaacggcaacggtgccgctgctgctacagccgcccccggtgccgctgcc
gctgctacagccgccggccactcggcggctgacaaggctctgaagcacctgctgctgtac
actgacgccgacgaactgtaccgcacagctctgggcctgtacgacctgcccctggcctac
atggtggtggtggcgtcgccgcacaaggacccgggcgaggcgctggcggagctgcagcgc
ttcggcgccgtgcggccgcagccgctgcagcgccacgccatcgacctgcacctgcgccgc
tacgcctccgccctgcgccacctggtggccgcggggcagcagcacttcagccaggcgcta
cagctagcccgcgagcgcggcctgctgcggcagttgctgcagctgtacgacaacgaccca
gagcaccggcccgccgtacttgaggcgtacggccagcagctggaggcggccaagcggtac
gacgacgcggcggtgacctacctggcggcgggcgcggggcggcgggcgctggcggcctac
cgcgccggcggcaggtggcggcagctgttcagcgtggccgggcagctgggcatggcggca
gaggaggtgcaggctctggctgcggacgtggtcgaggagctggcgggcggcggccaggcg
gcggacgcggccgcagtactgctgcactacctgggtgacgtggacaacgcagtacggacg
tacggcaacgccagggagtggcgcgaggcggtgcgggtggcgcacgcccacagccgacac
gacctggtggagacggtggtggcgccggcggcggcggagagcgccagctcgctgctgacg
gaggcgggcgaggcggttgagaagatccgaaagtacgggcagcggttggcagacgtgcgg
gcgcggcggttggccatggcggcggcgctggcggcggcagacgaggaggcggacgcggcg
ggcttggacttcgacgcccagtccgacgccatgtcaatggtgtcgggcctgtctgtttac
acggacgcaacacacacagcgccgccgggctccgccgccgccggcggctccgcggcctcc
tccgctgcaggcggcggctcatcacgggcaccctccacgctcggcggtcgccgcgcgcag
ggcggcaaaaagaagaagacgggtgccagccgcatccgccagggctcacccatggaggag
gccagcctgtgcgcgcacctgcacagcctggcgcccaggccggccgcactgtcagagacg
gggcagctgctggagctgttggtgatgctgggccacgccgacgacgcccgggcgctacag
cgggccgtggcgggctggcaggcggcttacgaggcggcacgtgccgacatggccgcgcac
ccggtgcccgtggagggtccgccgcatgcgcgcgaggagatggagcggctgctgacgccg
gcgcccgacacggccggtgtggcgtggaagtgggaggtgctgcgggactggggaccggcg
tag
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