Chlamydomonas reinhardtii: CHLRE_08g372800v5 Help Entry CHLRE_08g372800v5 CDS       T01039                                  Name (RefSeq) uncharacterized protein   KO K12830   splicing factor 3B subunit 3 Organism cre  Chlamydomonas reinhardtii Pathway cre03040   Spliceosome Brite KEGG Orthology (KO) [BR:cre00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     CHLRE_08g372800v5  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cre03021]     CHLRE_08g372800v5    03041 Spliceosome [BR:cre03041]     CHLRE_08g372800v5    03036 Chromosome and associated proteins [BR:cre03036]     CHLRE_08g372800v5 Transcription machinery [BR:cre03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      CHLRE_08g372800v5 Spliceosome [BR:cre03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     CHLRE_08g372800v5  Complex B     CHLRE_08g372800v5  Complex C    U2 SnRNP specific factors     CHLRE_08g372800v5 Chromosome and associated proteins [BR:cre03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      CHLRE_08g372800v5     TFTC complex      CHLRE_08g372800v5 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_LRRK2 Motif Other DBs NCBI-GeneID:  5726872 NCBI-ProteinID:  XP_042922064 UniProt:  A0A2K3DHC5 LinkDB All DBs Position 8:2591266..2606190 Genome browser AA seq 1214 aa AA seqDB search MFLYSLTLSRASGIQTAVYGNFSGPKAQEVVVSRGKVLELLRPNENGKMQTVVATEVFGQ IRSLAAVRLTGSTTDHLAIGSDSGRIVLIKFNKDKNVWVKVHQETFGRSGCRRIVPGQFL AVDPKGRACMVGAVEKQKFVYVLNRDAAANLTISSPLEAHKSHHITFSICGMDCGFDNPI FAAIELDYSEADQDPTGEAASLAQKHLTFYEMDLGLNNVVRKWTEPVDNGANLLIAVPGG ADGPGGVLVCAENFIIYKNQDHEEVRAVIPRRSDLPGDRGVLIVSYATHKKKAYSFFLVQ SEYGDIYKVTLSYEGEAVTEVKVKYFDTIPVTASIAVLKTGFLFAASEYGNHALYQFVGT GEDDDDVESSSAQLVATEEGFQPVFFEPRPLKNLLLIDEMASLMPITDMKVANLLGEEIP QIYALCGRGPRASLSVLRPGLAVTELAVSPLPGAPTAVWTVRRAASDEYDAYIVVSFANA TLVFSIGEEVKETNESGFLGTVPTLHTQLLADNSMLQVYPGGLRHIRPDRRINEWKVPGR RVIKAAASNDKQVAIALQGGEVTLFELELGTGLLVEAEKRDLAEDVSCLELPPVPEGLQR AAFLAVGTYDQTVRILSTDPGAGLKNLAVQALNSVPESLLMLYNVGPGAERASEGGLFVH VGLQNGVLIRAEVDRVSGQLSDSRTRFLGTRAPKLFAATIRGVRCMLALSSRPWLGYSDQ GRFNLSPLSYDALDYASGFASDQCPEGFVAVVKSTLRILAVENVGDAFNTQACRLRYTPR KLLIQPEARLLIIAEADHAAVPLAEREDLQARLAALAEEQGGAPVQGVEFNDELAALEEQ FGPPKGAAGQWAGCLRIVEPSSLSTVFVTEMDNNEALVSMCLAELRMPGGMGAGPTGMET VLLVGTARGLRYMPTDCEAAYIRVYRLGDGGRRLDLLHKTQVDGGVPGALAGFKGRLLAG VGPTLRLYDMGKKKMLRKCEYNRLPHQIMNITVQGPRIHVGDAQESVHMMRYKKADNAFY IFADDVAPRYLSALLPLDYDTIATGDKFGNLVILRLPQEASQQVEDDPTGGKMAAASGKL NGAPHKLEELVKFHVGDTITALQRAEMQAGGQEVLVYSTVMGAIGVVYPFTSREDVDFFS HLEMHLRQENPPLAGRDHLAYRSAYFPVRNCVDGDLCSQYASIPMKKQQMIAEAMDRTTG EMLKKLEDIRNKIL NT seq 3645 nt NT seq  +upstreamnt  +downstreamnt atgtttctttactcgctcacgctcagccgggcctctggcatccagacggcggtctatggg aacttcagcgggccaaaggcgcaggaggtcgtcgtttcgcgtggcaaagtcctggagctg ctgcgtcccaatgaaaatggcaaaatgcaaactgtggttgccactgaggtcttcggacaa attcgctcgttggcggcagttcggctcactggttccaccacagaccacctagctatcggc tcagactcggggaggatcgtgttgatcaagttcaacaaggacaagaacgtgtgggtcaag gttcaccaggagacattcgggagatcgggttgccggcgcatcgtgccgggccagttcctg gccgtcgaccccaaggggcgtgcgtgtatggtgggggcagtggagaagcagaagttcgtg tacgtgctgaaccgcgacgcggcggccaacctcaccatctcctcgccactcgaggcgcac aagtcacaccacatcactttcagcatctgtggcatggactgcggattcgacaaccccatc ttcgccgccattgagctggactactcggaagcggaccaggaccccaccggcgaggctgcc agcctggcccagaagcacctcaccttttacgaaatggacctgggcctgaacaacgtggtg cgcaagtggacagagccggtggacaacggcgccaacctgctgatcgcggtgccgggcggt gcggacgggccgggcggcgtgctggtgtgcgcggagaacttcatcatctacaagaaccag gaccacgaggaggtgcgcgccgtcatcccgcggcgctccgacctgcccggcgaccgcggc gtgctgatcgtgagctacgccacccacaagaagaaggcgtacagcttcttcctggtgcag tccgagtacggcgacatctacaaggtgacgctcagctatgagggcgaggcggtgacggag gtcaaggtcaagtactttgacaccatccccgtcaccgcctccattgccgtgctcaagacc ggcttcctgttcgccgcgtccgagtacggcaaccacgcgctgtaccagttcgtgggcacg ggcgaggacgacgacgacgtggagagcagcagcgcgcagctggtggccacggaagagggc ttccagcccgtgttcttcgagccgcggccgctcaagaacctgctgctgattgacgagatg gccagcctcatgcccatcaccgacatgaaggtggccaacctgctgggcgaggagatcccc cagatctacgccctgtgcggccgcggcccgcgcgcctccctctccgtgctgcgccccggt ctcgcagtcaccgagctggccgtgtcgccgctgcccggcgcccccaccgccgtgtggacc gtccggcgcgccgccagcgacgagtacgacgcctacatcgtggtcagcttcgcgaacgcc acgctggtgttcagcatcggcgaggaggtgaaggagaccaatgagagcggcttcctgggc acggtgccgacgctgcacacgcagctgctggcggacaactccatgctgcaggtgtacccg ggcgggctgcgccacatccggcccgaccgccgcatcaacgagtggaaggtgccggggcgg cgcgtcatcaaggccgccgcctcaaacgacaagcaggtggccatcgcgctgcagggcggc gaggtgacgctgttcgagctggagctggggacaggcctgctggtggaggctgagaagcgc gacctggccgaggacgtgtcgtgtctggagctgccgcccgtgccggaggggctgcagcgc gcggcgttcctggcggtgggcacgtacgaccagacggtgcgcatcctgtccacagacccg ggggcggggctcaagaacctggcggtgcaggctctcaactccgtgccggagtcgctgctg atgctgtacaacgtgggcccgggcgcggagcgggccagcgagggcgggctgttcgtgcac gtggggctgcagaacggggtgctcatccgggcagaggtggaccgggtgtcgggccagctg tccgacagccgcacgcgcttcctgggcacgcgcgcgcccaagctgttcgccgccaccatc cgcggcgtgcgctgcatgctggcgctgtcgtcgcggccctggctgggctacagcgaccag ggacggttcaacctgtcgccgctgtcttacgacgcactggactacgcctcgggcttcgcc agcgaccagtgccccgagggctttgtggcggtggtgaagagcacactgcgcatcctggcg gtggagaacgtgggcgacgcattcaacacgcaggcctgccgcctgcgctacacgccccgc aagctgctgatccagcccgaggcgcggctgctcatcatcgccgaggccgaccacgccgcc gtgccgctggcggagcgcgaggacctgcaggctcggctggctgccctggctgaggagcag ggcggcgcgccggtgcagggcgtggagttcaacgacgagctggcggcgctggaggagcag ttcgggccgcccaagggcgcggcggggcagtgggcgggctgcctgcgcattgtggagccg tccagcctcagcaccgtgttcgtgaccgagatggacaacaacgaggcgctggtgtccatg tgtctggcggagctgcgcatgcccggcggcatgggcgccgggcccacgggcatggagacg gtgctgctagtgggcaccgcccgggggctgcgctacatgcccacggactgcgaggccgcc tacatccgcgtgtaccggctgggcgacggcggccggcggctggacctgctgcacaagacg caggtggacggcggcgtgcctggcgcgctggctggcttcaaggggcggctgctggcgggc gtggggcccaccctgcgactgtacgacatgggcaagaagaagatgctgcgcaagtgcgag tacaacaggctgccgcaccagatcatgaacatcacggtgcaggggccgcgcatccacgtg ggcgacgcgcaggagtcggtgcacatgatgcgctacaagaaggccgacaacgccttttac atctttgccgacgacgtggcgccgcgctacctgtcggcgctgctgccgctggactacgac accattgccaccggcgacaagttcggcaacctggtcatcctgcggctgccgcaggaggcc tcgcagcaggttgaggacgaccccacgggcggcaagatggcggcggctagcggcaaactc aacggcgcgccgcacaagctggaggagctggtcaagttccacgtgggcgacaccatcacg gcgctgcagcgggcggagatgcaggcgggaggccaggaggtgctggtgtactctacggtg atgggcgccattggtgtggtgtaccccttcaccagccgcgaggacgtggacttcttctcc cacctggaaatgcacctgcgccaggagaacccgccgctggcggggcgcgaccacctggcc tacaggtccgcctacttcccggtgcgcaactgtgtagacggcgacctgtgcagccagtac gcctcgatccccatgaagaagcagcagatgattgcggaggccatggaccgcaccacaggc gagatgctgaagaagctggaggacatccgcaacaagatcttgtag

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